Experiment: Cytosine 0.9 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS01040 and A4249_RS01045 are separated by 273 nucleotides A4249_RS01045 and A4249_RS01050 are separated by 10 nucleotides
A4249_RS01040: A4249_RS01040 - hypothetical protein, at 198,995 to 199,672
_RS01040
A4249_RS01045: A4249_RS01045 - osmoprotectant NAGGN system M42 family peptidase, at 199,946 to 201,070
_RS01045
A4249_RS01050: A4249_RS01050 - N-acetylglutaminylglutamine synthetase, at 201,081 to 202,850
_RS01050
Position (kb) 199
200
201
202 Strain fitness (log2 ratio) -2
-1
0
1 at 198.946 kb on + strand at 198.946 kb on + strand at 198.947 kb on - strand at 198.947 kb on - strand at 198.996 kb on + strand at 198.997 kb on - strand at 199.200 kb on + strand, within A4249_RS01040 at 199.200 kb on + strand, within A4249_RS01040 at 199.200 kb on + strand, within A4249_RS01040 at 199.200 kb on + strand, within A4249_RS01040 at 199.200 kb on + strand, within A4249_RS01040 at 199.201 kb on - strand, within A4249_RS01040 at 199.201 kb on - strand, within A4249_RS01040 at 199.201 kb on - strand, within A4249_RS01040 at 199.201 kb on - strand, within A4249_RS01040 at 199.201 kb on - strand, within A4249_RS01040 at 199.201 kb on - strand, within A4249_RS01040 at 199.201 kb on - strand, within A4249_RS01040 at 199.201 kb on - strand, within A4249_RS01040 at 199.201 kb on - strand, within A4249_RS01040 at 199.201 kb on - strand, within A4249_RS01040 at 199.260 kb on + strand, within A4249_RS01040 at 199.260 kb on + strand, within A4249_RS01040 at 199.260 kb on + strand, within A4249_RS01040 at 199.260 kb on + strand, within A4249_RS01040 at 199.260 kb on + strand, within A4249_RS01040 at 199.260 kb on + strand, within A4249_RS01040 at 199.260 kb on + strand, within A4249_RS01040 at 199.260 kb on + strand, within A4249_RS01040 at 199.260 kb on + strand, within A4249_RS01040 at 199.260 kb on + strand, within A4249_RS01040 at 199.260 kb on + strand, within A4249_RS01040 at 199.260 kb on + strand, within A4249_RS01040 at 199.260 kb on + strand, within A4249_RS01040 at 199.260 kb on + strand, within A4249_RS01040 at 199.261 kb on - strand, within A4249_RS01040 at 199.261 kb on - strand, within A4249_RS01040 at 199.261 kb on - strand, within A4249_RS01040 at 199.261 kb on - strand, within A4249_RS01040 at 199.261 kb on - strand, within A4249_RS01040 at 199.261 kb on - strand, within A4249_RS01040 at 199.261 kb on - strand, within A4249_RS01040 at 199.261 kb on - strand, within A4249_RS01040 at 199.261 kb on - strand, within A4249_RS01040 at 199.261 kb on - strand, within A4249_RS01040 at 199.261 kb on - strand, within A4249_RS01040 at 199.261 kb on - strand, within A4249_RS01040 at 199.261 kb on - strand, within A4249_RS01040 at 199.261 kb on - strand, within A4249_RS01040 at 199.467 kb on + strand, within A4249_RS01040 at 199.467 kb on + strand, within A4249_RS01040 at 199.467 kb on + strand, within A4249_RS01040 at 199.467 kb on + strand, within A4249_RS01040 at 199.467 kb on + strand, within A4249_RS01040 at 199.468 kb on - strand, within A4249_RS01040 at 199.468 kb on - strand, within A4249_RS01040 at 199.468 kb on - strand, within A4249_RS01040 at 199.468 kb on - strand, within A4249_RS01040 at 199.468 kb on - strand, within A4249_RS01040 at 199.468 kb on - strand, within A4249_RS01040 at 199.468 kb on - strand, within A4249_RS01040 at 199.468 kb on - strand, within A4249_RS01040 at 199.497 kb on + strand, within A4249_RS01040 at 199.497 kb on + strand, within A4249_RS01040 at 199.497 kb on + strand, within A4249_RS01040 at 199.498 kb on - strand, within A4249_RS01040 at 199.498 kb on - strand, within A4249_RS01040 at 199.560 kb on + strand, within A4249_RS01040 at 199.560 kb on + strand, within A4249_RS01040 at 199.560 kb on + strand, within A4249_RS01040 at 199.560 kb on + strand, within A4249_RS01040 at 199.560 kb on + strand, within A4249_RS01040 at 199.561 kb on - strand, within A4249_RS01040 at 199.561 kb on - strand, within A4249_RS01040 at 199.561 kb on - strand, within A4249_RS01040 at 199.634 kb on + strand at 199.634 kb on + strand at 199.634 kb on + strand at 199.635 kb on - strand at 199.635 kb on - strand at 199.635 kb on - strand at 199.635 kb on - strand at 199.672 kb on + strand at 199.673 kb on - strand at 199.842 kb on + strand at 199.843 kb on - strand at 199.843 kb on - strand at 199.843 kb on - strand at 199.843 kb on - strand at 199.884 kb on + strand at 199.884 kb on + strand at 199.884 kb on + strand at 199.885 kb on - strand at 199.914 kb on + strand at 199.915 kb on - strand at 199.922 kb on + strand at 199.940 kb on + strand at 199.947 kb on + strand at 199.947 kb on + strand at 199.947 kb on + strand at 199.948 kb on - strand at 199.948 kb on - strand at 199.948 kb on - strand at 199.948 kb on - strand at 199.948 kb on - strand at 200.041 kb on - strand at 200.094 kb on + strand, within A4249_RS01045 at 200.181 kb on + strand, within A4249_RS01045 at 200.181 kb on + strand, within A4249_RS01045 at 200.181 kb on + strand, within A4249_RS01045 at 200.181 kb on + strand, within A4249_RS01045 at 200.182 kb on - strand, within A4249_RS01045 at 200.182 kb on - strand, within A4249_RS01045 at 200.182 kb on - strand, within A4249_RS01045 at 200.184 kb on + strand, within A4249_RS01045 at 200.184 kb on + strand, within A4249_RS01045 at 200.533 kb on + strand, within A4249_RS01045 at 200.686 kb on + strand, within A4249_RS01045 at 200.686 kb on + strand, within A4249_RS01045 at 200.686 kb on + strand, within A4249_RS01045 at 200.687 kb on - strand, within A4249_RS01045 at 200.887 kb on + strand, within A4249_RS01045 at 200.888 kb on - strand, within A4249_RS01045 at 200.934 kb on + strand, within A4249_RS01045 at 200.969 kb on + strand at 200.989 kb on + strand at 200.989 kb on + strand at 200.989 kb on + strand at 200.989 kb on + strand at 200.989 kb on + strand at 200.990 kb on - strand at 200.990 kb on - strand at 200.990 kb on - strand at 200.990 kb on - strand at 200.990 kb on - strand at 200.990 kb on - strand at 200.990 kb on - strand at 200.990 kb on - strand at 200.991 kb on + strand at 201.042 kb on + strand at 201.042 kb on + strand at 201.043 kb on - strand at 201.043 kb on - strand at 201.043 kb on - strand at 201.043 kb on - strand at 201.043 kb on - strand at 201.043 kb on - strand at 201.053 kb on + strand at 201.144 kb on + strand at 201.144 kb on + strand at 201.144 kb on + strand at 201.145 kb on - strand at 201.145 kb on - strand at 201.145 kb on - strand at 201.217 kb on + strand at 201.218 kb on - strand at 201.270 kb on - strand, within A4249_RS01050 at 201.271 kb on + strand, within A4249_RS01050 at 201.272 kb on - strand, within A4249_RS01050 at 201.437 kb on + strand, within A4249_RS01050 at 201.437 kb on + strand, within A4249_RS01050 at 201.437 kb on + strand, within A4249_RS01050 at 201.437 kb on + strand, within A4249_RS01050 at 201.437 kb on + strand, within A4249_RS01050 at 201.437 kb on + strand, within A4249_RS01050 at 201.438 kb on - strand, within A4249_RS01050 at 201.438 kb on - strand, within A4249_RS01050 at 201.438 kb on - strand, within A4249_RS01050 at 201.516 kb on - strand, within A4249_RS01050 at 201.589 kb on + strand, within A4249_RS01050 at 201.589 kb on + strand, within A4249_RS01050 at 201.589 kb on + strand, within A4249_RS01050 at 201.589 kb on + strand, within A4249_RS01050 at 201.590 kb on - strand, within A4249_RS01050 at 201.600 kb on + strand, within A4249_RS01050 at 201.600 kb on + strand, within A4249_RS01050 at 201.600 kb on + strand, within A4249_RS01050 at 202.027 kb on + strand, within A4249_RS01050 at 202.028 kb on - strand, within A4249_RS01050 at 202.028 kb on - strand, within A4249_RS01050
Per-strain Table
Position Strand Gene LocusTag Fraction Cytosine 0.9 mM (C) remove 198,946 + +0.4 198,946 + -0.7 198,947 - +0.4 198,947 - -0.1 198,996 + +0.2 198,997 - +0.0 199,200 + A4249_RS01040 0.30 -0.4 199,200 + A4249_RS01040 0.30 +0.6 199,200 + A4249_RS01040 0.30 +1.2 199,200 + A4249_RS01040 0.30 -0.4 199,200 + A4249_RS01040 0.30 +0.0 199,201 - A4249_RS01040 0.30 +0.0 199,201 - A4249_RS01040 0.30 +0.3 199,201 - A4249_RS01040 0.30 +0.2 199,201 - A4249_RS01040 0.30 -0.3 199,201 - A4249_RS01040 0.30 -0.3 199,201 - A4249_RS01040 0.30 +0.0 199,201 - A4249_RS01040 0.30 +0.4 199,201 - A4249_RS01040 0.30 -0.1 199,201 - A4249_RS01040 0.30 +0.4 199,201 - A4249_RS01040 0.30 -0.9 199,260 + A4249_RS01040 0.39 -0.1 199,260 + A4249_RS01040 0.39 +0.4 199,260 + A4249_RS01040 0.39 +0.9 199,260 + A4249_RS01040 0.39 -0.4 199,260 + A4249_RS01040 0.39 -0.6 199,260 + A4249_RS01040 0.39 +0.5 199,260 + A4249_RS01040 0.39 +0.2 199,260 + A4249_RS01040 0.39 +0.0 199,260 + A4249_RS01040 0.39 -0.1 199,260 + A4249_RS01040 0.39 -0.1 199,260 + A4249_RS01040 0.39 -0.5 199,260 + A4249_RS01040 0.39 +0.9 199,260 + A4249_RS01040 0.39 -0.7 199,260 + A4249_RS01040 0.39 +0.3 199,261 - A4249_RS01040 0.39 -0.3 199,261 - A4249_RS01040 0.39 +0.4 199,261 - A4249_RS01040 0.39 +0.0 199,261 - A4249_RS01040 0.39 -1.5 199,261 - A4249_RS01040 0.39 -0.7 199,261 - A4249_RS01040 0.39 +1.1 199,261 - A4249_RS01040 0.39 -0.5 199,261 - A4249_RS01040 0.39 +0.6 199,261 - A4249_RS01040 0.39 +1.3 199,261 - A4249_RS01040 0.39 +0.2 199,261 - A4249_RS01040 0.39 +0.8 199,261 - A4249_RS01040 0.39 -1.2 199,261 - A4249_RS01040 0.39 +0.0 199,261 - A4249_RS01040 0.39 +0.1 199,467 + A4249_RS01040 0.70 -1.0 199,467 + A4249_RS01040 0.70 -0.1 199,467 + A4249_RS01040 0.70 -1.7 199,467 + A4249_RS01040 0.70 +1.1 199,467 + A4249_RS01040 0.70 +1.5 199,468 - A4249_RS01040 0.70 -0.1 199,468 - A4249_RS01040 0.70 -1.4 199,468 - A4249_RS01040 0.70 +0.5 199,468 - A4249_RS01040 0.70 +0.1 199,468 - A4249_RS01040 0.70 -0.1 199,468 - A4249_RS01040 0.70 +0.8 199,468 - A4249_RS01040 0.70 -0.4 199,468 - A4249_RS01040 0.70 -1.2 199,497 + A4249_RS01040 0.74 -0.0 199,497 + A4249_RS01040 0.74 -0.8 199,497 + A4249_RS01040 0.74 +0.6 199,498 - A4249_RS01040 0.74 +0.1 199,498 - A4249_RS01040 0.74 +0.2 199,560 + A4249_RS01040 0.83 +0.3 199,560 + A4249_RS01040 0.83 -0.3 199,560 + A4249_RS01040 0.83 -0.2 199,560 + A4249_RS01040 0.83 -0.5 199,560 + A4249_RS01040 0.83 -0.3 199,561 - A4249_RS01040 0.83 -0.2 199,561 - A4249_RS01040 0.83 +0.2 199,561 - A4249_RS01040 0.83 +0.4 199,634 + -0.5 199,634 + +0.3 199,634 + +0.5 199,635 - +0.3 199,635 - -0.3 199,635 - -0.5 199,635 - -0.5 199,672 + +1.0 199,673 - +1.3 199,842 + -0.3 199,843 - -0.5 199,843 - -0.1 199,843 - +0.1 199,843 - -0.9 199,884 + +0.2 199,884 + -0.2 199,884 + +0.0 199,885 - -0.9 199,914 + +0.3 199,915 - +0.6 199,922 + +0.3 199,940 + -0.2 199,947 + -0.4 199,947 + -0.0 199,947 + +0.2 199,948 - +0.2 199,948 - +0.1 199,948 - +0.5 199,948 - -0.7 199,948 - -1.8 200,041 - -0.0 200,094 + A4249_RS01045 0.13 -0.2 200,181 + A4249_RS01045 0.21 -0.6 200,181 + A4249_RS01045 0.21 +0.4 200,181 + A4249_RS01045 0.21 +0.3 200,181 + A4249_RS01045 0.21 +0.1 200,182 - A4249_RS01045 0.21 -0.3 200,182 - A4249_RS01045 0.21 +0.2 200,182 - A4249_RS01045 0.21 -0.2 200,184 + A4249_RS01045 0.21 +0.9 200,184 + A4249_RS01045 0.21 -0.2 200,533 + A4249_RS01045 0.52 -0.3 200,686 + A4249_RS01045 0.66 -0.3 200,686 + A4249_RS01045 0.66 -0.4 200,686 + A4249_RS01045 0.66 +0.6 200,687 - A4249_RS01045 0.66 +0.2 200,887 + A4249_RS01045 0.84 +0.0 200,888 - A4249_RS01045 0.84 +0.0 200,934 + A4249_RS01045 0.88 -1.7 200,969 + -0.1 200,989 + -0.4 200,989 + +0.5 200,989 + +0.1 200,989 + -0.1 200,989 + +0.2 200,990 - +0.7 200,990 - -1.0 200,990 - +0.3 200,990 - -1.4 200,990 - -0.1 200,990 - +0.2 200,990 - +1.0 200,990 - -0.1 200,991 + -0.1 201,042 + -0.5 201,042 + -0.0 201,043 - -0.1 201,043 - +1.1 201,043 - +0.2 201,043 - -0.4 201,043 - +0.3 201,043 - -0.2 201,053 + +0.7 201,144 + +0.2 201,144 + +0.8 201,144 + -0.1 201,145 - -0.1 201,145 - -0.8 201,145 - +0.2 201,217 + -0.6 201,218 - -0.1 201,270 - A4249_RS01050 0.11 +1.1 201,271 + A4249_RS01050 0.11 -0.7 201,272 - A4249_RS01050 0.11 +0.0 201,437 + A4249_RS01050 0.20 +0.6 201,437 + A4249_RS01050 0.20 +0.5 201,437 + A4249_RS01050 0.20 -0.2 201,437 + A4249_RS01050 0.20 -1.5 201,437 + A4249_RS01050 0.20 -0.4 201,437 + A4249_RS01050 0.20 -0.8 201,438 - A4249_RS01050 0.20 +1.2 201,438 - A4249_RS01050 0.20 +0.6 201,438 - A4249_RS01050 0.20 -0.6 201,516 - A4249_RS01050 0.25 +0.0 201,589 + A4249_RS01050 0.29 -0.4 201,589 + A4249_RS01050 0.29 +0.1 201,589 + A4249_RS01050 0.29 -0.1 201,589 + A4249_RS01050 0.29 -0.1 201,590 - A4249_RS01050 0.29 +0.5 201,600 + A4249_RS01050 0.29 -1.6 201,600 + A4249_RS01050 0.29 +0.7 201,600 + A4249_RS01050 0.29 -0.4 202,027 + A4249_RS01050 0.53 -0.4 202,028 - A4249_RS01050 0.54 +1.6 202,028 - A4249_RS01050 0.54 -0.1
Or see this region's nucleotide sequence