Experiment: Cytosine 0.9 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS00430 and A4249_RS00435 are separated by 87 nucleotides A4249_RS00435 and A4249_RS00440 are separated by 26 nucleotides A4249_RS00440 and A4249_RS00445 are separated by 107 nucleotides A4249_RS00445 and A4249_RS00450 are separated by 94 nucleotides
A4249_RS00430: A4249_RS00430 - glutathione S-transferase family protein, at 72,709 to 73,395
_RS00430
A4249_RS00435: A4249_RS00435 - S-formylglutathione hydrolase, at 73,483 to 74,322
_RS00435
A4249_RS00440: A4249_RS00440 - hypothetical protein, at 74,349 to 74,573
_RS00440
A4249_RS00445: A4249_RS00445 - superoxide dismutase, at 74,681 to 75,292
_RS00445
A4249_RS00450: A4249_RS00450 - MBL fold metallo-hydrolase, at 75,387 to 76,325
_RS00450
Position (kb) 74
75 Strain fitness (log2 ratio) -2
-1
0
1 at 73.430 kb on + strand at 73.430 kb on + strand at 73.430 kb on + strand at 73.430 kb on + strand at 73.430 kb on + strand at 73.431 kb on - strand at 73.431 kb on - strand at 73.472 kb on - strand at 73.534 kb on + strand at 73.534 kb on + strand at 73.534 kb on + strand at 73.535 kb on - strand at 73.535 kb on - strand at 73.535 kb on - strand at 73.653 kb on + strand, within A4249_RS00435 at 73.678 kb on + strand, within A4249_RS00435 at 73.678 kb on + strand, within A4249_RS00435 at 73.678 kb on + strand, within A4249_RS00435 at 73.679 kb on - strand, within A4249_RS00435 at 73.679 kb on - strand, within A4249_RS00435 at 73.762 kb on + strand, within A4249_RS00435 at 73.789 kb on + strand, within A4249_RS00435 at 73.789 kb on + strand, within A4249_RS00435 at 73.789 kb on + strand, within A4249_RS00435 at 73.789 kb on + strand, within A4249_RS00435 at 73.789 kb on + strand, within A4249_RS00435 at 73.789 kb on + strand, within A4249_RS00435 at 73.789 kb on + strand, within A4249_RS00435 at 73.789 kb on + strand, within A4249_RS00435 at 73.789 kb on + strand, within A4249_RS00435 at 73.789 kb on + strand, within A4249_RS00435 at 73.789 kb on + strand, within A4249_RS00435 at 73.789 kb on + strand, within A4249_RS00435 at 73.789 kb on + strand, within A4249_RS00435 at 73.789 kb on + strand, within A4249_RS00435 at 73.789 kb on + strand, within A4249_RS00435 at 73.790 kb on - strand, within A4249_RS00435 at 73.790 kb on - strand, within A4249_RS00435 at 73.790 kb on - strand, within A4249_RS00435 at 73.790 kb on - strand, within A4249_RS00435 at 73.790 kb on - strand, within A4249_RS00435 at 73.790 kb on - strand, within A4249_RS00435 at 73.790 kb on - strand, within A4249_RS00435 at 73.790 kb on - strand, within A4249_RS00435 at 73.790 kb on - strand, within A4249_RS00435 at 73.790 kb on - strand, within A4249_RS00435 at 73.790 kb on - strand, within A4249_RS00435 at 73.840 kb on + strand, within A4249_RS00435 at 73.840 kb on + strand, within A4249_RS00435 at 73.840 kb on + strand, within A4249_RS00435 at 73.840 kb on + strand, within A4249_RS00435 at 73.840 kb on + strand, within A4249_RS00435 at 73.841 kb on - strand, within A4249_RS00435 at 73.841 kb on - strand, within A4249_RS00435 at 73.841 kb on - strand, within A4249_RS00435 at 73.841 kb on - strand, within A4249_RS00435 at 73.841 kb on - strand, within A4249_RS00435 at 73.841 kb on - strand, within A4249_RS00435 at 73.841 kb on - strand, within A4249_RS00435 at 73.841 kb on - strand, within A4249_RS00435 at 73.841 kb on - strand, within A4249_RS00435 at 73.841 kb on - strand, within A4249_RS00435 at 73.841 kb on - strand, within A4249_RS00435 at 73.841 kb on - strand, within A4249_RS00435 at 74.041 kb on + strand, within A4249_RS00435 at 74.042 kb on - strand, within A4249_RS00435 at 74.042 kb on - strand, within A4249_RS00435 at 74.042 kb on - strand, within A4249_RS00435 at 74.042 kb on - strand, within A4249_RS00435 at 74.119 kb on + strand, within A4249_RS00435 at 74.119 kb on + strand, within A4249_RS00435 at 74.119 kb on + strand, within A4249_RS00435 at 74.119 kb on + strand, within A4249_RS00435 at 74.120 kb on - strand, within A4249_RS00435 at 74.120 kb on - strand, within A4249_RS00435 at 74.120 kb on - strand, within A4249_RS00435 at 74.232 kb on + strand, within A4249_RS00435 at 74.232 kb on + strand, within A4249_RS00435 at 74.233 kb on - strand, within A4249_RS00435 at 74.233 kb on - strand, within A4249_RS00435 at 74.234 kb on + strand, within A4249_RS00435 at 74.234 kb on + strand, within A4249_RS00435 at 74.234 kb on + strand, within A4249_RS00435 at 74.235 kb on - strand, within A4249_RS00435 at 74.235 kb on - strand, within A4249_RS00435 at 74.257 kb on + strand at 74.257 kb on + strand at 74.257 kb on + strand at 74.257 kb on + strand at 74.257 kb on + strand at 74.257 kb on + strand at 74.257 kb on + strand at 74.257 kb on + strand at 74.258 kb on - strand at 74.258 kb on - strand at 74.258 kb on - strand at 74.337 kb on + strand at 74.337 kb on + strand at 74.337 kb on + strand at 74.337 kb on + strand at 74.337 kb on + strand at 74.337 kb on + strand at 74.337 kb on + strand at 74.338 kb on - strand at 74.338 kb on - strand at 74.338 kb on - strand at 74.406 kb on + strand, within A4249_RS00440 at 74.407 kb on - strand, within A4249_RS00440 at 74.588 kb on + strand at 74.588 kb on + strand at 74.588 kb on + strand at 74.589 kb on - strand at 74.589 kb on - strand at 74.639 kb on + strand at 74.639 kb on + strand at 74.639 kb on + strand at 74.639 kb on + strand at 74.639 kb on + strand at 75.290 kb on + strand at 75.290 kb on + strand at 75.290 kb on + strand at 75.290 kb on + strand at 75.290 kb on + strand at 75.290 kb on + strand at 75.291 kb on - strand at 75.300 kb on - strand at 75.440 kb on + strand at 75.492 kb on - strand, within A4249_RS00450 at 75.528 kb on + strand, within A4249_RS00450 at 75.528 kb on + strand, within A4249_RS00450 at 75.529 kb on - strand, within A4249_RS00450 at 75.529 kb on - strand, within A4249_RS00450
Per-strain Table
Position Strand Gene LocusTag Fraction Cytosine 0.9 mM (C) remove 73,430 + +0.1 73,430 + -0.0 73,430 + +0.2 73,430 + -1.0 73,430 + -0.2 73,431 - +0.1 73,431 - -0.9 73,472 - +0.6 73,534 + -0.1 73,534 + +0.0 73,534 + +0.7 73,535 - -0.1 73,535 - +0.1 73,535 - +1.0 73,653 + A4249_RS00435 0.20 +0.6 73,678 + A4249_RS00435 0.23 -0.2 73,678 + A4249_RS00435 0.23 -0.8 73,678 + A4249_RS00435 0.23 -0.2 73,679 - A4249_RS00435 0.23 +0.0 73,679 - A4249_RS00435 0.23 -0.4 73,762 + A4249_RS00435 0.33 +0.4 73,789 + A4249_RS00435 0.36 +0.1 73,789 + A4249_RS00435 0.36 -0.2 73,789 + A4249_RS00435 0.36 -2.0 73,789 + A4249_RS00435 0.36 +0.1 73,789 + A4249_RS00435 0.36 -0.0 73,789 + A4249_RS00435 0.36 -0.1 73,789 + A4249_RS00435 0.36 -0.2 73,789 + A4249_RS00435 0.36 -0.2 73,789 + A4249_RS00435 0.36 +0.1 73,789 + A4249_RS00435 0.36 -0.2 73,789 + A4249_RS00435 0.36 -0.8 73,789 + A4249_RS00435 0.36 +0.5 73,789 + A4249_RS00435 0.36 -0.2 73,789 + A4249_RS00435 0.36 +0.3 73,789 + A4249_RS00435 0.36 -0.0 73,790 - A4249_RS00435 0.37 -0.2 73,790 - A4249_RS00435 0.37 -0.3 73,790 - A4249_RS00435 0.37 +0.1 73,790 - A4249_RS00435 0.37 -0.7 73,790 - A4249_RS00435 0.37 -0.0 73,790 - A4249_RS00435 0.37 -0.3 73,790 - A4249_RS00435 0.37 -0.6 73,790 - A4249_RS00435 0.37 +0.2 73,790 - A4249_RS00435 0.37 -0.4 73,790 - A4249_RS00435 0.37 +0.7 73,790 - A4249_RS00435 0.37 +1.4 73,840 + A4249_RS00435 0.42 +0.2 73,840 + A4249_RS00435 0.42 -0.1 73,840 + A4249_RS00435 0.42 +0.9 73,840 + A4249_RS00435 0.42 +0.7 73,840 + A4249_RS00435 0.42 -0.0 73,841 - A4249_RS00435 0.43 +0.1 73,841 - A4249_RS00435 0.43 +0.0 73,841 - A4249_RS00435 0.43 +0.9 73,841 - A4249_RS00435 0.43 +0.2 73,841 - A4249_RS00435 0.43 -0.5 73,841 - A4249_RS00435 0.43 +0.5 73,841 - A4249_RS00435 0.43 -0.0 73,841 - A4249_RS00435 0.43 +0.0 73,841 - A4249_RS00435 0.43 -1.5 73,841 - A4249_RS00435 0.43 +0.7 73,841 - A4249_RS00435 0.43 -0.1 73,841 - A4249_RS00435 0.43 +0.4 74,041 + A4249_RS00435 0.66 -0.1 74,042 - A4249_RS00435 0.67 -0.1 74,042 - A4249_RS00435 0.67 +0.5 74,042 - A4249_RS00435 0.67 +0.4 74,042 - A4249_RS00435 0.67 +0.7 74,119 + A4249_RS00435 0.76 -0.3 74,119 + A4249_RS00435 0.76 +0.2 74,119 + A4249_RS00435 0.76 -0.2 74,119 + A4249_RS00435 0.76 -0.3 74,120 - A4249_RS00435 0.76 -0.4 74,120 - A4249_RS00435 0.76 +0.6 74,120 - A4249_RS00435 0.76 +0.3 74,232 + A4249_RS00435 0.89 -0.2 74,232 + A4249_RS00435 0.89 +0.4 74,233 - A4249_RS00435 0.89 +0.5 74,233 - A4249_RS00435 0.89 -0.1 74,234 + A4249_RS00435 0.89 +1.1 74,234 + A4249_RS00435 0.89 +0.6 74,234 + A4249_RS00435 0.89 +0.2 74,235 - A4249_RS00435 0.90 -0.4 74,235 - A4249_RS00435 0.90 -0.2 74,257 + +0.7 74,257 + +0.2 74,257 + +0.1 74,257 + -0.1 74,257 + -0.5 74,257 + +0.3 74,257 + -0.6 74,257 + +0.5 74,258 - +0.5 74,258 - -1.7 74,258 - -0.4 74,337 + +0.4 74,337 + -0.4 74,337 + +0.4 74,337 + +0.7 74,337 + +0.2 74,337 + +0.6 74,337 + -0.1 74,338 - +0.1 74,338 - -0.6 74,338 - +0.1 74,406 + A4249_RS00440 0.25 +0.4 74,407 - A4249_RS00440 0.26 +0.4 74,588 + +1.0 74,588 + +0.1 74,588 + -0.6 74,589 - +0.4 74,589 - -0.4 74,639 + +1.0 74,639 + +1.6 74,639 + -2.2 74,639 + -0.2 74,639 + -2.0 75,290 + -2.2 75,290 + -0.4 75,290 + +0.3 75,290 + -0.2 75,290 + -0.4 75,290 + +0.7 75,291 - +0.9 75,300 - +0.5 75,440 + -0.3 75,492 - A4249_RS00450 0.11 +0.1 75,528 + A4249_RS00450 0.15 +0.2 75,528 + A4249_RS00450 0.15 +0.4 75,529 - A4249_RS00450 0.15 -0.3 75,529 - A4249_RS00450 0.15 +0.0
Or see this region's nucleotide sequence