Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS17085

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS04895 and A4249_RS17085 overlap by 4 nucleotidesA4249_RS17085 and A4249_RS04905 are separated by 133 nucleotidesA4249_RS04905 and A4249_RS04910 are separated by 109 nucleotides A4249_RS04895: A4249_RS04895 - NAD(P)/FAD-dependent oxidoreductase, at 1,019,651 to 1,020,766 _RS04895 A4249_RS17085: A4249_RS17085 - sugar O-acetyltransferase, at 1,020,763 to 1,021,314 _RS17085 A4249_RS04905: A4249_RS04905 - 50S ribosomal protein L32, at 1,021,448 to 1,021,630 _RS04905 A4249_RS04910: A4249_RS04910 - hypothetical protein, at 1,021,740 to 1,022,360 _RS04910 Position (kb) 1020 1021 1022Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1019.778 kb on + strand, within A4249_RS04895at 1019.779 kb on - strand, within A4249_RS04895at 1019.816 kb on + strand, within A4249_RS04895at 1019.816 kb on + strand, within A4249_RS04895at 1019.816 kb on + strand, within A4249_RS04895at 1019.816 kb on + strand, within A4249_RS04895at 1019.817 kb on - strand, within A4249_RS04895at 1019.817 kb on - strand, within A4249_RS04895at 1019.820 kb on - strand, within A4249_RS04895at 1019.874 kb on - strand, within A4249_RS04895at 1019.874 kb on - strand, within A4249_RS04895at 1020.056 kb on + strand, within A4249_RS04895at 1020.056 kb on + strand, within A4249_RS04895at 1020.104 kb on + strand, within A4249_RS04895at 1020.104 kb on + strand, within A4249_RS04895at 1020.105 kb on - strand, within A4249_RS04895at 1020.105 kb on - strand, within A4249_RS04895at 1020.105 kb on - strand, within A4249_RS04895at 1020.105 kb on - strand, within A4249_RS04895at 1020.105 kb on - strand, within A4249_RS04895at 1020.106 kb on + strand, within A4249_RS04895at 1020.106 kb on + strand, within A4249_RS04895at 1020.106 kb on + strand, within A4249_RS04895at 1020.106 kb on + strand, within A4249_RS04895at 1020.106 kb on + strand, within A4249_RS04895at 1020.106 kb on + strand, within A4249_RS04895at 1020.106 kb on + strand, within A4249_RS04895at 1020.106 kb on + strand, within A4249_RS04895at 1020.106 kb on + strand, within A4249_RS04895at 1020.106 kb on + strand, within A4249_RS04895at 1020.106 kb on + strand, within A4249_RS04895at 1020.106 kb on + strand, within A4249_RS04895at 1020.106 kb on + strand, within A4249_RS04895at 1020.106 kb on + strand, within A4249_RS04895at 1020.106 kb on + strand, within A4249_RS04895at 1020.106 kb on + strand, within A4249_RS04895at 1020.106 kb on + strand, within A4249_RS04895at 1020.106 kb on + strand, within A4249_RS04895at 1020.106 kb on + strand, within A4249_RS04895at 1020.106 kb on + strand, within A4249_RS04895at 1020.106 kb on + strand, within A4249_RS04895at 1020.106 kb on + strand, within A4249_RS04895at 1020.106 kb on + strand, within A4249_RS04895at 1020.106 kb on + strand, within A4249_RS04895at 1020.106 kb on + strand, within A4249_RS04895at 1020.107 kb on - strand, within A4249_RS04895at 1020.107 kb on - strand, within A4249_RS04895at 1020.107 kb on - strand, within A4249_RS04895at 1020.107 kb on - strand, within A4249_RS04895at 1020.107 kb on - strand, within A4249_RS04895at 1020.107 kb on - strand, within A4249_RS04895at 1020.107 kb on - strand, within A4249_RS04895at 1020.107 kb on - strand, within A4249_RS04895at 1020.107 kb on - strand, within A4249_RS04895at 1020.107 kb on - strand, within A4249_RS04895at 1020.107 kb on - strand, within A4249_RS04895at 1020.107 kb on - strand, within A4249_RS04895at 1020.107 kb on - strand, within A4249_RS04895at 1020.107 kb on - strand, within A4249_RS04895at 1020.107 kb on - strand, within A4249_RS04895at 1020.107 kb on - strand, within A4249_RS04895at 1020.107 kb on - strand, within A4249_RS04895at 1020.107 kb on - strand, within A4249_RS04895at 1020.107 kb on - strand, within A4249_RS04895at 1020.350 kb on + strand, within A4249_RS04895at 1020.350 kb on + strand, within A4249_RS04895at 1020.351 kb on - strand, within A4249_RS04895at 1020.351 kb on - strand, within A4249_RS04895at 1020.351 kb on - strand, within A4249_RS04895at 1020.351 kb on - strand, within A4249_RS04895at 1020.351 kb on - strand, within A4249_RS04895at 1020.351 kb on - strand, within A4249_RS04895at 1020.392 kb on + strand, within A4249_RS04895at 1020.392 kb on + strand, within A4249_RS04895at 1020.392 kb on + strand, within A4249_RS04895at 1020.392 kb on + strand, within A4249_RS04895at 1020.393 kb on - strand, within A4249_RS04895at 1020.393 kb on - strand, within A4249_RS04895at 1020.393 kb on - strand, within A4249_RS04895at 1020.429 kb on - strand, within A4249_RS04895at 1020.476 kb on + strand, within A4249_RS04895at 1020.476 kb on + strand, within A4249_RS04895at 1020.476 kb on + strand, within A4249_RS04895at 1020.476 kb on + strand, within A4249_RS04895at 1020.494 kb on + strand, within A4249_RS04895at 1020.494 kb on + strand, within A4249_RS04895at 1020.494 kb on + strand, within A4249_RS04895at 1020.495 kb on - strand, within A4249_RS04895at 1020.495 kb on - strand, within A4249_RS04895at 1020.495 kb on - strand, within A4249_RS04895at 1020.495 kb on - strand, within A4249_RS04895at 1020.495 kb on - strand, within A4249_RS04895at 1020.533 kb on + strand, within A4249_RS04895at 1020.533 kb on + strand, within A4249_RS04895at 1020.533 kb on + strand, within A4249_RS04895at 1020.533 kb on + strand, within A4249_RS04895at 1020.533 kb on + strand, within A4249_RS04895at 1020.533 kb on + strand, within A4249_RS04895at 1020.533 kb on + strand, within A4249_RS04895at 1020.534 kb on - strand, within A4249_RS04895at 1020.534 kb on - strand, within A4249_RS04895at 1020.534 kb on - strand, within A4249_RS04895at 1020.534 kb on - strand, within A4249_RS04895at 1020.534 kb on - strand, within A4249_RS04895at 1020.534 kb on - strand, within A4249_RS04895at 1020.534 kb on - strand, within A4249_RS04895at 1020.584 kb on + strand, within A4249_RS04895at 1020.584 kb on + strand, within A4249_RS04895at 1020.584 kb on + strand, within A4249_RS04895at 1020.585 kb on - strand, within A4249_RS04895at 1020.585 kb on - strand, within A4249_RS04895at 1020.799 kb on + strandat 1020.965 kb on - strand, within A4249_RS17085at 1020.965 kb on - strand, within A4249_RS17085at 1021.312 kb on + strandat 1021.312 kb on + strandat 1021.312 kb on + strandat 1021.628 kb on + strandat 1021.628 kb on + strandat 1021.628 kb on + strandat 1022.132 kb on + strand, within A4249_RS04910at 1022.157 kb on + strand, within A4249_RS04910at 1022.157 kb on + strand, within A4249_RS04910at 1022.157 kb on + strand, within A4249_RS04910at 1022.157 kb on + strand, within A4249_RS04910at 1022.157 kb on + strand, within A4249_RS04910at 1022.158 kb on - strand, within A4249_RS04910at 1022.158 kb on - strand, within A4249_RS04910at 1022.158 kb on - strand, within A4249_RS04910at 1022.190 kb on + strand, within A4249_RS04910at 1022.247 kb on + strand, within A4249_RS04910at 1022.247 kb on + strand, within A4249_RS04910at 1022.247 kb on + strand, within A4249_RS04910at 1022.247 kb on + strand, within A4249_RS04910at 1022.247 kb on + strand, within A4249_RS04910at 1022.247 kb on + strand, within A4249_RS04910at 1022.247 kb on + strand, within A4249_RS04910at 1022.247 kb on + strand, within A4249_RS04910at 1022.247 kb on + strand, within A4249_RS04910at 1022.247 kb on + strand, within A4249_RS04910at 1022.247 kb on + strand, within A4249_RS04910at 1022.247 kb on + strand, within A4249_RS04910at 1022.247 kb on + strand, within A4249_RS04910at 1022.247 kb on + strand, within A4249_RS04910at 1022.247 kb on + strand, within A4249_RS04910at 1022.247 kb on + strand, within A4249_RS04910at 1022.247 kb on + strand, within A4249_RS04910at 1022.248 kb on - strand, within A4249_RS04910at 1022.248 kb on - strand, within A4249_RS04910at 1022.248 kb on - strand, within A4249_RS04910at 1022.248 kb on - strand, within A4249_RS04910at 1022.248 kb on - strand, within A4249_RS04910at 1022.248 kb on - strand, within A4249_RS04910at 1022.248 kb on - strand, within A4249_RS04910at 1022.248 kb on - strand, within A4249_RS04910at 1022.280 kb on + strand, within A4249_RS04910at 1022.281 kb on - strand, within A4249_RS04910

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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1,019,778 + A4249_RS04895 0.11 +0.4
1,019,779 - A4249_RS04895 0.11 -0.4
1,019,816 + A4249_RS04895 0.15 +0.5
1,019,816 + A4249_RS04895 0.15 -0.2
1,019,816 + A4249_RS04895 0.15 -0.0
1,019,816 + A4249_RS04895 0.15 +0.6
1,019,817 - A4249_RS04895 0.15 -0.4
1,019,817 - A4249_RS04895 0.15 +0.1
1,019,820 - A4249_RS04895 0.15 +0.9
1,019,874 - A4249_RS04895 0.20 -0.0
1,019,874 - A4249_RS04895 0.20 -0.2
1,020,056 + A4249_RS04895 0.36 +0.1
1,020,056 + A4249_RS04895 0.36 +1.0
1,020,104 + A4249_RS04895 0.41 -1.8
1,020,104 + A4249_RS04895 0.41 -0.2
1,020,105 - A4249_RS04895 0.41 +0.3
1,020,105 - A4249_RS04895 0.41 -0.2
1,020,105 - A4249_RS04895 0.41 +0.1
1,020,105 - A4249_RS04895 0.41 -1.1
1,020,105 - A4249_RS04895 0.41 +0.4
1,020,106 + A4249_RS04895 0.41 -0.5
1,020,106 + A4249_RS04895 0.41 +0.0
1,020,106 + A4249_RS04895 0.41 -0.4
1,020,106 + A4249_RS04895 0.41 +1.0
1,020,106 + A4249_RS04895 0.41 -0.7
1,020,106 + A4249_RS04895 0.41 -0.2
1,020,106 + A4249_RS04895 0.41 -0.1
1,020,106 + A4249_RS04895 0.41 +0.1
1,020,106 + A4249_RS04895 0.41 -0.1
1,020,106 + A4249_RS04895 0.41 +0.6
1,020,106 + A4249_RS04895 0.41 -0.5
1,020,106 + A4249_RS04895 0.41 -0.4
1,020,106 + A4249_RS04895 0.41 +0.4
1,020,106 + A4249_RS04895 0.41 +1.0
1,020,106 + A4249_RS04895 0.41 +0.7
1,020,106 + A4249_RS04895 0.41 +0.2
1,020,106 + A4249_RS04895 0.41 -0.8
1,020,106 + A4249_RS04895 0.41 +0.2
1,020,106 + A4249_RS04895 0.41 -0.9
1,020,106 + A4249_RS04895 0.41 -0.5
1,020,106 + A4249_RS04895 0.41 -0.3
1,020,106 + A4249_RS04895 0.41 +0.2
1,020,106 + A4249_RS04895 0.41 +1.1
1,020,106 + A4249_RS04895 0.41 -2.8
1,020,106 + A4249_RS04895 0.41 +0.9
1,020,107 - A4249_RS04895 0.41 -0.3
1,020,107 - A4249_RS04895 0.41 +1.1
1,020,107 - A4249_RS04895 0.41 +0.5
1,020,107 - A4249_RS04895 0.41 +0.6
1,020,107 - A4249_RS04895 0.41 -0.0
1,020,107 - A4249_RS04895 0.41 -1.1
1,020,107 - A4249_RS04895 0.41 +0.3
1,020,107 - A4249_RS04895 0.41 +0.8
1,020,107 - A4249_RS04895 0.41 +0.3
1,020,107 - A4249_RS04895 0.41 -1.0
1,020,107 - A4249_RS04895 0.41 +0.4
1,020,107 - A4249_RS04895 0.41 -0.7
1,020,107 - A4249_RS04895 0.41 -0.5
1,020,107 - A4249_RS04895 0.41 -0.1
1,020,107 - A4249_RS04895 0.41 -0.2
1,020,107 - A4249_RS04895 0.41 +0.2
1,020,107 - A4249_RS04895 0.41 +0.2
1,020,107 - A4249_RS04895 0.41 +1.0
1,020,107 - A4249_RS04895 0.41 +0.8
1,020,350 + A4249_RS04895 0.63 -0.1
1,020,350 + A4249_RS04895 0.63 +0.9
1,020,351 - A4249_RS04895 0.63 -0.5
1,020,351 - A4249_RS04895 0.63 -0.1
1,020,351 - A4249_RS04895 0.63 +0.9
1,020,351 - A4249_RS04895 0.63 +2.1
1,020,351 - A4249_RS04895 0.63 +0.7
1,020,351 - A4249_RS04895 0.63 +0.2
1,020,392 + A4249_RS04895 0.66 -0.6
1,020,392 + A4249_RS04895 0.66 -0.1
1,020,392 + A4249_RS04895 0.66 +0.8
1,020,392 + A4249_RS04895 0.66 -0.3
1,020,393 - A4249_RS04895 0.66 -0.4
1,020,393 - A4249_RS04895 0.66 -0.2
1,020,393 - A4249_RS04895 0.66 -0.0
1,020,429 - A4249_RS04895 0.70 -1.9
1,020,476 + A4249_RS04895 0.74 +0.1
1,020,476 + A4249_RS04895 0.74 -0.4
1,020,476 + A4249_RS04895 0.74 +0.3
1,020,476 + A4249_RS04895 0.74 -0.9
1,020,494 + A4249_RS04895 0.76 -0.1
1,020,494 + A4249_RS04895 0.76 +0.7
1,020,494 + A4249_RS04895 0.76 +1.4
1,020,495 - A4249_RS04895 0.76 -1.5
1,020,495 - A4249_RS04895 0.76 -0.4
1,020,495 - A4249_RS04895 0.76 +0.5
1,020,495 - A4249_RS04895 0.76 -0.0
1,020,495 - A4249_RS04895 0.76 -0.4
1,020,533 + A4249_RS04895 0.79 +0.4
1,020,533 + A4249_RS04895 0.79 -0.8
1,020,533 + A4249_RS04895 0.79 -0.5
1,020,533 + A4249_RS04895 0.79 -0.1
1,020,533 + A4249_RS04895 0.79 +0.5
1,020,533 + A4249_RS04895 0.79 -0.6
1,020,533 + A4249_RS04895 0.79 -0.0
1,020,534 - A4249_RS04895 0.79 -0.4
1,020,534 - A4249_RS04895 0.79 -1.1
1,020,534 - A4249_RS04895 0.79 +0.2
1,020,534 - A4249_RS04895 0.79 +0.6
1,020,534 - A4249_RS04895 0.79 -1.8
1,020,534 - A4249_RS04895 0.79 -0.1
1,020,534 - A4249_RS04895 0.79 +0.1
1,020,584 + A4249_RS04895 0.84 -0.1
1,020,584 + A4249_RS04895 0.84 -0.2
1,020,584 + A4249_RS04895 0.84 -0.8
1,020,585 - A4249_RS04895 0.84 +0.1
1,020,585 - A4249_RS04895 0.84 -0.2
1,020,799 + +0.1
1,020,965 - A4249_RS17085 0.37 +0.3
1,020,965 - A4249_RS17085 0.37 -0.4
1,021,312 + -0.1
1,021,312 + -0.4
1,021,312 + +0.3
1,021,628 + +2.3
1,021,628 + +0.8
1,021,628 + -1.8
1,022,132 + A4249_RS04910 0.63 -0.2
1,022,157 + A4249_RS04910 0.67 -1.0
1,022,157 + A4249_RS04910 0.67 -0.6
1,022,157 + A4249_RS04910 0.67 +0.5
1,022,157 + A4249_RS04910 0.67 +0.1
1,022,157 + A4249_RS04910 0.67 +0.6
1,022,158 - A4249_RS04910 0.67 -0.7
1,022,158 - A4249_RS04910 0.67 -0.3
1,022,158 - A4249_RS04910 0.67 +0.4
1,022,190 + A4249_RS04910 0.72 -0.2
1,022,247 + A4249_RS04910 0.82 -0.1
1,022,247 + A4249_RS04910 0.82 -0.1
1,022,247 + A4249_RS04910 0.82 -0.3
1,022,247 + A4249_RS04910 0.82 -0.3
1,022,247 + A4249_RS04910 0.82 -0.5
1,022,247 + A4249_RS04910 0.82 +0.8
1,022,247 + A4249_RS04910 0.82 -0.6
1,022,247 + A4249_RS04910 0.82 -0.8
1,022,247 + A4249_RS04910 0.82 -1.7
1,022,247 + A4249_RS04910 0.82 -0.3
1,022,247 + A4249_RS04910 0.82 -0.3
1,022,247 + A4249_RS04910 0.82 -0.1
1,022,247 + A4249_RS04910 0.82 +0.8
1,022,247 + A4249_RS04910 0.82 +0.2
1,022,247 + A4249_RS04910 0.82 -0.5
1,022,247 + A4249_RS04910 0.82 -0.3
1,022,247 + A4249_RS04910 0.82 -0.4
1,022,248 - A4249_RS04910 0.82 +0.7
1,022,248 - A4249_RS04910 0.82 +0.2
1,022,248 - A4249_RS04910 0.82 -0.4
1,022,248 - A4249_RS04910 0.82 +0.3
1,022,248 - A4249_RS04910 0.82 -0.3
1,022,248 - A4249_RS04910 0.82 -0.1
1,022,248 - A4249_RS04910 0.82 +0.0
1,022,248 - A4249_RS04910 0.82 +0.5
1,022,280 + A4249_RS04910 0.87 +0.4
1,022,281 - A4249_RS04910 0.87 +0.3

Or see this region's nucleotide sequence