Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS01790 and A4249_RS16460 overlap by 4 nucleotides A4249_RS16460 and A4249_RS01805 are separated by 740 nucleotides
A4249_RS01790: A4249_RS01790 - site-specific DNA-methyltransferase, at 339,909 to 341,258
_RS01790
A4249_RS16460: A4249_RS16460 - hypothetical protein, at 341,255 to 341,689
_RS16460
A4249_RS01805: A4249_RS01805 - hypothetical protein, at 342,430 to 347,964
_RS01805
Position (kb) 341
342 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 340.274 kb on + strand, within A4249_RS01790 at 340.274 kb on + strand, within A4249_RS01790 at 340.274 kb on + strand, within A4249_RS01790 at 340.275 kb on - strand, within A4249_RS01790 at 340.275 kb on - strand, within A4249_RS01790 at 340.275 kb on - strand, within A4249_RS01790 at 340.275 kb on - strand, within A4249_RS01790 at 340.321 kb on + strand, within A4249_RS01790 at 340.321 kb on + strand, within A4249_RS01790 at 340.321 kb on + strand, within A4249_RS01790 at 340.322 kb on - strand, within A4249_RS01790 at 340.322 kb on - strand, within A4249_RS01790 at 340.322 kb on - strand, within A4249_RS01790 at 340.372 kb on + strand, within A4249_RS01790 at 340.372 kb on + strand, within A4249_RS01790 at 340.372 kb on + strand, within A4249_RS01790 at 340.373 kb on - strand, within A4249_RS01790 at 340.373 kb on - strand, within A4249_RS01790 at 340.373 kb on - strand, within A4249_RS01790 at 340.373 kb on - strand, within A4249_RS01790 at 340.466 kb on + strand, within A4249_RS01790 at 340.467 kb on - strand, within A4249_RS01790 at 340.467 kb on - strand, within A4249_RS01790 at 340.467 kb on - strand, within A4249_RS01790 at 340.489 kb on + strand, within A4249_RS01790 at 340.490 kb on - strand, within A4249_RS01790 at 340.490 kb on - strand, within A4249_RS01790 at 340.490 kb on - strand, within A4249_RS01790 at 340.605 kb on + strand, within A4249_RS01790 at 340.605 kb on + strand, within A4249_RS01790 at 340.605 kb on + strand, within A4249_RS01790 at 340.605 kb on + strand, within A4249_RS01790 at 340.605 kb on + strand, within A4249_RS01790 at 340.605 kb on + strand, within A4249_RS01790 at 340.606 kb on - strand, within A4249_RS01790 at 340.606 kb on - strand, within A4249_RS01790 at 340.606 kb on - strand, within A4249_RS01790 at 340.606 kb on - strand, within A4249_RS01790 at 340.606 kb on - strand, within A4249_RS01790 at 340.641 kb on + strand, within A4249_RS01790 at 340.641 kb on + strand, within A4249_RS01790 at 340.641 kb on + strand, within A4249_RS01790 at 340.642 kb on - strand, within A4249_RS01790 at 340.646 kb on + strand, within A4249_RS01790 at 340.646 kb on + strand, within A4249_RS01790 at 340.646 kb on + strand, within A4249_RS01790 at 340.646 kb on + strand, within A4249_RS01790 at 340.646 kb on + strand, within A4249_RS01790 at 340.646 kb on + strand, within A4249_RS01790 at 340.646 kb on + strand, within A4249_RS01790 at 340.646 kb on + strand, within A4249_RS01790 at 340.646 kb on + strand, within A4249_RS01790 at 340.646 kb on + strand, within A4249_RS01790 at 340.646 kb on + strand, within A4249_RS01790 at 340.646 kb on + strand, within A4249_RS01790 at 340.646 kb on + strand, within A4249_RS01790 at 340.647 kb on - strand, within A4249_RS01790 at 340.647 kb on - strand, within A4249_RS01790 at 340.647 kb on - strand, within A4249_RS01790 at 340.647 kb on - strand, within A4249_RS01790 at 340.647 kb on - strand, within A4249_RS01790 at 340.647 kb on - strand, within A4249_RS01790 at 340.647 kb on - strand, within A4249_RS01790 at 340.647 kb on - strand, within A4249_RS01790 at 340.647 kb on - strand, within A4249_RS01790 at 340.647 kb on - strand, within A4249_RS01790 at 340.647 kb on - strand, within A4249_RS01790 at 340.647 kb on - strand, within A4249_RS01790 at 340.647 kb on - strand, within A4249_RS01790 at 340.648 kb on + strand, within A4249_RS01790 at 340.648 kb on + strand, within A4249_RS01790 at 340.648 kb on + strand, within A4249_RS01790 at 340.648 kb on + strand, within A4249_RS01790 at 340.648 kb on + strand, within A4249_RS01790 at 340.648 kb on + strand, within A4249_RS01790 at 340.648 kb on + strand, within A4249_RS01790 at 340.649 kb on - strand, within A4249_RS01790 at 340.649 kb on - strand, within A4249_RS01790 at 340.649 kb on - strand, within A4249_RS01790 at 340.649 kb on - strand, within A4249_RS01790 at 340.649 kb on - strand, within A4249_RS01790 at 340.649 kb on - strand, within A4249_RS01790 at 340.649 kb on - strand, within A4249_RS01790 at 340.649 kb on - strand, within A4249_RS01790 at 340.649 kb on - strand, within A4249_RS01790 at 340.649 kb on - strand, within A4249_RS01790 at 340.984 kb on + strand, within A4249_RS01790 at 340.984 kb on + strand, within A4249_RS01790 at 340.984 kb on + strand, within A4249_RS01790 at 340.985 kb on - strand, within A4249_RS01790 at 340.985 kb on - strand, within A4249_RS01790 at 341.138 kb on + strand at 341.138 kb on + strand at 341.138 kb on + strand at 341.138 kb on + strand at 341.139 kb on - strand at 341.139 kb on - strand at 341.139 kb on - strand at 341.139 kb on - strand at 341.139 kb on - strand at 341.139 kb on - strand at 341.277 kb on - strand at 341.277 kb on - strand at 341.361 kb on - strand, within A4249_RS16460 at 341.481 kb on - strand, within A4249_RS16460 at 341.481 kb on - strand, within A4249_RS16460 at 341.484 kb on + strand, within A4249_RS16460 at 341.484 kb on + strand, within A4249_RS16460 at 341.822 kb on + strand at 341.822 kb on + strand at 341.822 kb on + strand at 341.822 kb on + strand at 341.822 kb on + strand at 341.822 kb on + strand at 341.822 kb on + strand at 341.822 kb on + strand at 341.822 kb on + strand at 341.823 kb on - strand at 341.823 kb on - strand at 341.823 kb on - strand at 341.823 kb on - strand at 341.823 kb on - strand at 341.852 kb on + strand at 341.853 kb on - strand at 341.863 kb on + strand at 341.864 kb on - strand at 341.889 kb on + strand at 341.993 kb on + strand at 341.993 kb on + strand at 341.993 kb on + strand at 341.993 kb on + strand at 341.994 kb on - strand at 341.994 kb on - strand at 341.994 kb on - strand at 341.994 kb on - strand at 341.994 kb on - strand at 342.055 kb on + strand at 342.055 kb on + strand at 342.056 kb on - strand at 342.056 kb on - strand at 342.056 kb on - strand at 342.056 kb on - strand at 342.214 kb on + strand at 342.215 kb on - strand at 342.215 kb on - strand at 342.215 kb on - strand at 342.277 kb on + strand at 342.277 kb on + strand at 342.277 kb on + strand at 342.277 kb on + strand at 342.277 kb on + strand at 342.278 kb on - strand at 342.278 kb on - strand at 342.343 kb on + strand at 342.343 kb on + strand at 342.343 kb on + strand at 342.343 kb on + strand at 342.343 kb on + strand at 342.343 kb on + strand at 342.344 kb on - strand at 342.344 kb on - strand at 342.344 kb on - strand at 342.344 kb on - strand at 342.344 kb on - strand at 342.344 kb on - strand at 342.344 kb on - strand at 342.378 kb on - strand at 342.378 kb on - strand at 342.466 kb on + strand at 342.467 kb on - strand at 342.494 kb on - strand at 342.609 kb on + strand at 342.609 kb on + strand at 342.609 kb on + strand at 342.610 kb on - strand at 342.610 kb on - strand at 342.610 kb on - strand at 342.617 kb on + strand at 342.617 kb on + strand at 342.617 kb on + strand at 342.617 kb on + strand at 342.617 kb on + strand at 342.617 kb on + strand at 342.617 kb on + strand at 342.618 kb on - strand at 342.618 kb on - strand at 342.618 kb on - strand at 342.618 kb on - strand at 342.618 kb on - strand at 342.618 kb on - strand at 342.618 kb on - strand at 342.618 kb on - strand at 342.618 kb on - strand at 342.618 kb on - strand at 342.618 kb on - strand at 342.618 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 340,274 + A4249_RS01790 0.27 -0.6 340,274 + A4249_RS01790 0.27 +0.1 340,274 + A4249_RS01790 0.27 -2.9 340,275 - A4249_RS01790 0.27 -0.0 340,275 - A4249_RS01790 0.27 +1.4 340,275 - A4249_RS01790 0.27 +0.2 340,275 - A4249_RS01790 0.27 +0.7 340,321 + A4249_RS01790 0.31 +0.4 340,321 + A4249_RS01790 0.31 +0.9 340,321 + A4249_RS01790 0.31 -0.6 340,322 - A4249_RS01790 0.31 +0.3 340,322 - A4249_RS01790 0.31 -0.2 340,322 - A4249_RS01790 0.31 +0.5 340,372 + A4249_RS01790 0.34 -0.4 340,372 + A4249_RS01790 0.34 +0.1 340,372 + A4249_RS01790 0.34 -0.0 340,373 - A4249_RS01790 0.34 +0.3 340,373 - A4249_RS01790 0.34 +0.3 340,373 - A4249_RS01790 0.34 +1.0 340,373 - A4249_RS01790 0.34 +0.1 340,466 + A4249_RS01790 0.41 -0.6 340,467 - A4249_RS01790 0.41 +0.0 340,467 - A4249_RS01790 0.41 +0.2 340,467 - A4249_RS01790 0.41 -1.5 340,489 + A4249_RS01790 0.43 -1.0 340,490 - A4249_RS01790 0.43 +0.3 340,490 - A4249_RS01790 0.43 -1.2 340,490 - A4249_RS01790 0.43 -0.6 340,605 + A4249_RS01790 0.52 -0.9 340,605 + A4249_RS01790 0.52 +0.0 340,605 + A4249_RS01790 0.52 +0.2 340,605 + A4249_RS01790 0.52 -0.5 340,605 + A4249_RS01790 0.52 +0.9 340,605 + A4249_RS01790 0.52 -0.2 340,606 - A4249_RS01790 0.52 -0.9 340,606 - A4249_RS01790 0.52 +0.3 340,606 - A4249_RS01790 0.52 -0.3 340,606 - A4249_RS01790 0.52 +0.6 340,606 - A4249_RS01790 0.52 +0.0 340,641 + A4249_RS01790 0.54 -0.1 340,641 + A4249_RS01790 0.54 -0.8 340,641 + A4249_RS01790 0.54 -0.1 340,642 - A4249_RS01790 0.54 +1.1 340,646 + A4249_RS01790 0.55 -1.1 340,646 + A4249_RS01790 0.55 -0.3 340,646 + A4249_RS01790 0.55 +0.4 340,646 + A4249_RS01790 0.55 -1.5 340,646 + A4249_RS01790 0.55 +0.5 340,646 + A4249_RS01790 0.55 +0.0 340,646 + A4249_RS01790 0.55 +0.2 340,646 + A4249_RS01790 0.55 -2.4 340,646 + A4249_RS01790 0.55 -0.6 340,646 + A4249_RS01790 0.55 -0.2 340,646 + A4249_RS01790 0.55 +0.2 340,646 + A4249_RS01790 0.55 -0.5 340,646 + A4249_RS01790 0.55 -0.1 340,647 - A4249_RS01790 0.55 -0.2 340,647 - A4249_RS01790 0.55 -0.9 340,647 - A4249_RS01790 0.55 -0.5 340,647 - A4249_RS01790 0.55 +0.5 340,647 - A4249_RS01790 0.55 -0.7 340,647 - A4249_RS01790 0.55 -0.3 340,647 - A4249_RS01790 0.55 -0.1 340,647 - A4249_RS01790 0.55 -0.3 340,647 - A4249_RS01790 0.55 +0.4 340,647 - A4249_RS01790 0.55 -0.4 340,647 - A4249_RS01790 0.55 -0.3 340,647 - A4249_RS01790 0.55 +0.5 340,647 - A4249_RS01790 0.55 +0.5 340,648 + A4249_RS01790 0.55 +0.4 340,648 + A4249_RS01790 0.55 -1.6 340,648 + A4249_RS01790 0.55 +2.0 340,648 + A4249_RS01790 0.55 +1.1 340,648 + A4249_RS01790 0.55 -0.5 340,648 + A4249_RS01790 0.55 -0.5 340,648 + A4249_RS01790 0.55 +0.2 340,649 - A4249_RS01790 0.55 -0.9 340,649 - A4249_RS01790 0.55 -1.9 340,649 - A4249_RS01790 0.55 -0.4 340,649 - A4249_RS01790 0.55 -0.7 340,649 - A4249_RS01790 0.55 -0.7 340,649 - A4249_RS01790 0.55 -0.5 340,649 - A4249_RS01790 0.55 +0.4 340,649 - A4249_RS01790 0.55 +0.5 340,649 - A4249_RS01790 0.55 +0.5 340,649 - A4249_RS01790 0.55 -0.3 340,984 + A4249_RS01790 0.80 +0.0 340,984 + A4249_RS01790 0.80 -0.7 340,984 + A4249_RS01790 0.80 +1.9 340,985 - A4249_RS01790 0.80 +0.0 340,985 - A4249_RS01790 0.80 +1.0 341,138 + -0.0 341,138 + -1.1 341,138 + +1.5 341,138 + +0.2 341,139 - -0.6 341,139 - +0.4 341,139 - +0.1 341,139 - -0.1 341,139 - -0.5 341,139 - -0.4 341,277 - +0.0 341,277 - -1.0 341,361 - A4249_RS16460 0.24 -1.1 341,481 - A4249_RS16460 0.52 -0.3 341,481 - A4249_RS16460 0.52 -0.9 341,484 + A4249_RS16460 0.53 +0.8 341,484 + A4249_RS16460 0.53 -0.5 341,822 + -0.7 341,822 + +0.3 341,822 + +0.2 341,822 + -0.1 341,822 + -0.2 341,822 + +0.3 341,822 + -0.2 341,822 + +0.3 341,822 + +1.1 341,823 - +0.1 341,823 - -0.5 341,823 - +0.1 341,823 - +0.9 341,823 - +0.2 341,852 + +0.7 341,853 - +0.3 341,863 + +0.6 341,864 - -0.5 341,889 + -0.3 341,993 + -0.3 341,993 + +0.8 341,993 + -1.7 341,993 + +0.4 341,994 - +0.0 341,994 - -0.4 341,994 - -0.3 341,994 - -0.1 341,994 - -1.3 342,055 + -0.1 342,055 + -0.3 342,056 - -0.0 342,056 - +0.4 342,056 - +0.8 342,056 - -0.3 342,214 + -0.2 342,215 - -0.7 342,215 - -1.2 342,215 - -2.9 342,277 + +0.4 342,277 + +0.2 342,277 + -0.1 342,277 + -0.4 342,277 + +0.3 342,278 - +0.6 342,278 - -0.1 342,343 + -0.4 342,343 + -0.5 342,343 + -0.2 342,343 + +0.2 342,343 + -1.9 342,343 + -0.2 342,344 - +0.2 342,344 - +0.4 342,344 - -1.3 342,344 - +0.1 342,344 - -0.9 342,344 - +0.5 342,344 - -0.8 342,378 - -1.3 342,378 - -0.7 342,466 + -0.1 342,467 - -0.4 342,494 - +0.3 342,609 + +0.3 342,609 + -0.6 342,609 + -0.2 342,610 - -1.0 342,610 - +1.5 342,610 - +0.3 342,617 + -0.2 342,617 + -0.2 342,617 + -0.2 342,617 + -0.2 342,617 + -1.8 342,617 + +0.3 342,617 + -1.0 342,618 - +1.4 342,618 - +1.0 342,618 - -1.4 342,618 - -0.4 342,618 - -0.1 342,618 - +0.0 342,618 - +0.8 342,618 - -0.5 342,618 - -0.3 342,618 - -0.2 342,618 - -0.1 342,618 - -0.2
Or see this region's nucleotide sequence