Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS16130 and A4249_RS16135 are separated by 230 nucleotides A4249_RS16135 and A4249_RS16140 are separated by 97 nucleotides
A4249_RS16130: A4249_RS16130 - ZIP family metal transporter, at 3,253,776 to 3,254,558
_RS16130
A4249_RS16135: A4249_RS16135 - glycoside hydrolase family 3 N-terminal domain-containing protein, at 3,254,789 to 3,257,026
_RS16135
A4249_RS16140: A4249_RS16140 - glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit, at 3,257,124 to 3,258,284
_RS16140
Position (kb)
3254
3255
3256
3257
3258 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3254.298 kb on + strand, within A4249_RS16130 at 3254.298 kb on + strand, within A4249_RS16130 at 3254.299 kb on - strand, within A4249_RS16130 at 3254.439 kb on + strand, within A4249_RS16130 at 3254.439 kb on + strand, within A4249_RS16130 at 3254.439 kb on + strand, within A4249_RS16130 at 3254.439 kb on + strand, within A4249_RS16130 at 3254.439 kb on + strand, within A4249_RS16130 at 3254.439 kb on + strand, within A4249_RS16130 at 3254.439 kb on + strand, within A4249_RS16130 at 3254.439 kb on + strand, within A4249_RS16130 at 3254.439 kb on + strand, within A4249_RS16130 at 3254.439 kb on + strand, within A4249_RS16130 at 3254.439 kb on + strand, within A4249_RS16130 at 3254.439 kb on + strand, within A4249_RS16130 at 3254.439 kb on + strand, within A4249_RS16130 at 3254.439 kb on + strand, within A4249_RS16130 at 3254.439 kb on + strand, within A4249_RS16130 at 3254.440 kb on - strand, within A4249_RS16130 at 3254.440 kb on - strand, within A4249_RS16130 at 3254.440 kb on - strand, within A4249_RS16130 at 3254.440 kb on - strand, within A4249_RS16130 at 3254.440 kb on - strand, within A4249_RS16130 at 3254.440 kb on - strand, within A4249_RS16130 at 3254.440 kb on - strand, within A4249_RS16130 at 3254.440 kb on - strand, within A4249_RS16130 at 3254.440 kb on - strand, within A4249_RS16130 at 3254.440 kb on - strand, within A4249_RS16130 at 3254.440 kb on - strand, within A4249_RS16130 at 3254.440 kb on - strand, within A4249_RS16130 at 3254.440 kb on - strand, within A4249_RS16130 at 3254.440 kb on - strand, within A4249_RS16130 at 3254.440 kb on - strand, within A4249_RS16130 at 3254.596 kb on + strand at 3254.596 kb on + strand at 3254.596 kb on + strand at 3254.597 kb on - strand at 3254.597 kb on - strand at 3254.606 kb on + strand at 3254.606 kb on + strand at 3254.606 kb on + strand at 3254.606 kb on + strand at 3254.606 kb on + strand at 3254.606 kb on + strand at 3254.606 kb on + strand at 3254.607 kb on - strand at 3254.607 kb on - strand at 3254.607 kb on - strand at 3254.607 kb on - strand at 3254.607 kb on - strand at 3254.607 kb on - strand at 3254.647 kb on + strand at 3254.696 kb on + strand at 3255.227 kb on + strand, within A4249_RS16135 at 3255.228 kb on - strand, within A4249_RS16135 at 3255.405 kb on - strand, within A4249_RS16135 at 3255.431 kb on + strand, within A4249_RS16135 at 3255.432 kb on - strand, within A4249_RS16135 at 3255.432 kb on - strand, within A4249_RS16135 at 3255.432 kb on - strand, within A4249_RS16135 at 3255.432 kb on - strand, within A4249_RS16135 at 3255.629 kb on + strand, within A4249_RS16135 at 3255.629 kb on + strand, within A4249_RS16135 at 3255.737 kb on + strand, within A4249_RS16135 at 3256.224 kb on + strand, within A4249_RS16135 at 3256.240 kb on + strand, within A4249_RS16135 at 3256.240 kb on + strand, within A4249_RS16135 at 3256.240 kb on + strand, within A4249_RS16135 at 3256.241 kb on - strand, within A4249_RS16135 at 3256.520 kb on + strand, within A4249_RS16135 at 3256.521 kb on - strand, within A4249_RS16135 at 3256.527 kb on - strand, within A4249_RS16135 at 3256.644 kb on - strand, within A4249_RS16135 at 3256.659 kb on - strand, within A4249_RS16135 at 3256.770 kb on - strand, within A4249_RS16135 at 3257.092 kb on + strand at 3257.111 kb on + strand at 3257.112 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 3,254,298 + A4249_RS16130 0.67 +0.1 3,254,298 + A4249_RS16130 0.67 -0.5 3,254,299 - A4249_RS16130 0.67 -0.1 3,254,439 + A4249_RS16130 0.85 +0.4 3,254,439 + A4249_RS16130 0.85 -0.5 3,254,439 + A4249_RS16130 0.85 +0.1 3,254,439 + A4249_RS16130 0.85 -1.7 3,254,439 + A4249_RS16130 0.85 -2.6 3,254,439 + A4249_RS16130 0.85 -0.3 3,254,439 + A4249_RS16130 0.85 +1.4 3,254,439 + A4249_RS16130 0.85 -0.1 3,254,439 + A4249_RS16130 0.85 +0.2 3,254,439 + A4249_RS16130 0.85 +0.2 3,254,439 + A4249_RS16130 0.85 -0.8 3,254,439 + A4249_RS16130 0.85 +0.9 3,254,439 + A4249_RS16130 0.85 -1.0 3,254,439 + A4249_RS16130 0.85 +0.6 3,254,439 + A4249_RS16130 0.85 +0.4 3,254,440 - A4249_RS16130 0.85 +0.5 3,254,440 - A4249_RS16130 0.85 +0.7 3,254,440 - A4249_RS16130 0.85 +0.4 3,254,440 - A4249_RS16130 0.85 -2.1 3,254,440 - A4249_RS16130 0.85 +0.4 3,254,440 - A4249_RS16130 0.85 -0.4 3,254,440 - A4249_RS16130 0.85 +0.2 3,254,440 - A4249_RS16130 0.85 +0.1 3,254,440 - A4249_RS16130 0.85 +0.0 3,254,440 - A4249_RS16130 0.85 +0.3 3,254,440 - A4249_RS16130 0.85 +0.5 3,254,440 - A4249_RS16130 0.85 -0.5 3,254,440 - A4249_RS16130 0.85 +0.0 3,254,440 - A4249_RS16130 0.85 -0.1 3,254,440 - A4249_RS16130 0.85 +0.3 3,254,596 + +1.0 3,254,596 + +0.7 3,254,596 + -0.8 3,254,597 - +0.4 3,254,597 - -0.6 3,254,606 + +0.5 3,254,606 + +0.2 3,254,606 + +1.1 3,254,606 + -0.5 3,254,606 + +0.5 3,254,606 + +0.5 3,254,606 + -1.1 3,254,607 - -0.6 3,254,607 - -0.0 3,254,607 - -0.2 3,254,607 - -0.2 3,254,607 - +0.6 3,254,607 - -0.1 3,254,647 + +0.5 3,254,696 + +0.1 3,255,227 + A4249_RS16135 0.20 +1.5 3,255,228 - A4249_RS16135 0.20 +2.1 3,255,405 - A4249_RS16135 0.28 +0.8 3,255,431 + A4249_RS16135 0.29 +0.3 3,255,432 - A4249_RS16135 0.29 +0.7 3,255,432 - A4249_RS16135 0.29 -0.9 3,255,432 - A4249_RS16135 0.29 +2.1 3,255,432 - A4249_RS16135 0.29 -1.8 3,255,629 + A4249_RS16135 0.38 +0.5 3,255,629 + A4249_RS16135 0.38 +0.8 3,255,737 + A4249_RS16135 0.42 +1.3 3,256,224 + A4249_RS16135 0.64 +1.4 3,256,240 + A4249_RS16135 0.65 +1.3 3,256,240 + A4249_RS16135 0.65 +0.1 3,256,240 + A4249_RS16135 0.65 -1.2 3,256,241 - A4249_RS16135 0.65 +1.0 3,256,520 + A4249_RS16135 0.77 +0.1 3,256,521 - A4249_RS16135 0.77 -0.4 3,256,527 - A4249_RS16135 0.78 +0.9 3,256,644 - A4249_RS16135 0.83 -1.8 3,256,659 - A4249_RS16135 0.84 +2.1 3,256,770 - A4249_RS16135 0.89 +0.3 3,257,092 + +0.1 3,257,111 + +0.7 3,257,112 - +0.3
Or see this region's nucleotide sequence