Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS16130

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS16125 and A4249_RS16130 are separated by 64 nucleotidesA4249_RS16130 and A4249_RS16135 are separated by 230 nucleotides A4249_RS16125: A4249_RS16125 - glutamate 5-kinase, at 3,252,554 to 3,253,711 _RS16125 A4249_RS16130: A4249_RS16130 - ZIP family metal transporter, at 3,253,776 to 3,254,558 _RS16130 A4249_RS16135: A4249_RS16135 - glycoside hydrolase family 3 N-terminal domain-containing protein, at 3,254,789 to 3,257,026 _RS16135 Position (kb) 3253 3254 3255Strain fitness (log2 ratio) -2 -1 0 1 2at 3252.868 kb on + strand, within A4249_RS16125at 3252.868 kb on + strand, within A4249_RS16125at 3252.869 kb on - strand, within A4249_RS16125at 3252.869 kb on - strand, within A4249_RS16125at 3252.869 kb on - strand, within A4249_RS16125at 3252.869 kb on - strand, within A4249_RS16125at 3252.869 kb on - strand, within A4249_RS16125at 3252.869 kb on - strand, within A4249_RS16125at 3252.869 kb on - strand, within A4249_RS16125at 3252.870 kb on + strand, within A4249_RS16125at 3252.870 kb on + strand, within A4249_RS16125at 3252.870 kb on + strand, within A4249_RS16125at 3253.143 kb on + strand, within A4249_RS16125at 3253.143 kb on + strand, within A4249_RS16125at 3253.143 kb on + strand, within A4249_RS16125at 3253.144 kb on - strand, within A4249_RS16125at 3253.144 kb on - strand, within A4249_RS16125at 3253.144 kb on - strand, within A4249_RS16125at 3253.231 kb on - strand, within A4249_RS16125at 3253.724 kb on - strandat 3254.298 kb on + strand, within A4249_RS16130at 3254.298 kb on + strand, within A4249_RS16130at 3254.299 kb on - strand, within A4249_RS16130at 3254.439 kb on + strand, within A4249_RS16130at 3254.439 kb on + strand, within A4249_RS16130at 3254.439 kb on + strand, within A4249_RS16130at 3254.439 kb on + strand, within A4249_RS16130at 3254.439 kb on + strand, within A4249_RS16130at 3254.439 kb on + strand, within A4249_RS16130at 3254.439 kb on + strand, within A4249_RS16130at 3254.439 kb on + strand, within A4249_RS16130at 3254.439 kb on + strand, within A4249_RS16130at 3254.439 kb on + strand, within A4249_RS16130at 3254.439 kb on + strand, within A4249_RS16130at 3254.439 kb on + strand, within A4249_RS16130at 3254.439 kb on + strand, within A4249_RS16130at 3254.439 kb on + strand, within A4249_RS16130at 3254.439 kb on + strand, within A4249_RS16130at 3254.440 kb on - strand, within A4249_RS16130at 3254.440 kb on - strand, within A4249_RS16130at 3254.440 kb on - strand, within A4249_RS16130at 3254.440 kb on - strand, within A4249_RS16130at 3254.440 kb on - strand, within A4249_RS16130at 3254.440 kb on - strand, within A4249_RS16130at 3254.440 kb on - strand, within A4249_RS16130at 3254.440 kb on - strand, within A4249_RS16130at 3254.440 kb on - strand, within A4249_RS16130at 3254.440 kb on - strand, within A4249_RS16130at 3254.440 kb on - strand, within A4249_RS16130at 3254.440 kb on - strand, within A4249_RS16130at 3254.440 kb on - strand, within A4249_RS16130at 3254.440 kb on - strand, within A4249_RS16130at 3254.440 kb on - strand, within A4249_RS16130at 3254.596 kb on + strandat 3254.596 kb on + strandat 3254.596 kb on + strandat 3254.597 kb on - strandat 3254.597 kb on - strandat 3254.606 kb on + strandat 3254.606 kb on + strandat 3254.606 kb on + strandat 3254.606 kb on + strandat 3254.606 kb on + strandat 3254.606 kb on + strandat 3254.606 kb on + strandat 3254.607 kb on - strandat 3254.607 kb on - strandat 3254.607 kb on - strandat 3254.607 kb on - strandat 3254.607 kb on - strandat 3254.607 kb on - strandat 3254.647 kb on + strandat 3254.696 kb on + strandat 3255.227 kb on + strand, within A4249_RS16135at 3255.228 kb on - strand, within A4249_RS16135at 3255.405 kb on - strand, within A4249_RS16135at 3255.431 kb on + strand, within A4249_RS16135at 3255.432 kb on - strand, within A4249_RS16135at 3255.432 kb on - strand, within A4249_RS16135at 3255.432 kb on - strand, within A4249_RS16135at 3255.432 kb on - strand, within A4249_RS16135

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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3,252,868 + A4249_RS16125 0.27 +0.5
3,252,868 + A4249_RS16125 0.27 +0.3
3,252,869 - A4249_RS16125 0.27 +0.3
3,252,869 - A4249_RS16125 0.27 +0.1
3,252,869 - A4249_RS16125 0.27 -0.4
3,252,869 - A4249_RS16125 0.27 -0.3
3,252,869 - A4249_RS16125 0.27 -0.4
3,252,869 - A4249_RS16125 0.27 +0.5
3,252,869 - A4249_RS16125 0.27 +1.3
3,252,870 + A4249_RS16125 0.27 -0.4
3,252,870 + A4249_RS16125 0.27 -0.1
3,252,870 + A4249_RS16125 0.27 -0.6
3,253,143 + A4249_RS16125 0.51 +0.6
3,253,143 + A4249_RS16125 0.51 +0.5
3,253,143 + A4249_RS16125 0.51 -0.0
3,253,144 - A4249_RS16125 0.51 -0.2
3,253,144 - A4249_RS16125 0.51 +0.2
3,253,144 - A4249_RS16125 0.51 -0.1
3,253,231 - A4249_RS16125 0.58 +0.6
3,253,724 - +0.9
3,254,298 + A4249_RS16130 0.67 +0.1
3,254,298 + A4249_RS16130 0.67 -0.5
3,254,299 - A4249_RS16130 0.67 -0.1
3,254,439 + A4249_RS16130 0.85 +0.4
3,254,439 + A4249_RS16130 0.85 -0.5
3,254,439 + A4249_RS16130 0.85 +0.1
3,254,439 + A4249_RS16130 0.85 -1.7
3,254,439 + A4249_RS16130 0.85 -2.6
3,254,439 + A4249_RS16130 0.85 -0.3
3,254,439 + A4249_RS16130 0.85 +1.4
3,254,439 + A4249_RS16130 0.85 -0.1
3,254,439 + A4249_RS16130 0.85 +0.2
3,254,439 + A4249_RS16130 0.85 +0.2
3,254,439 + A4249_RS16130 0.85 -0.8
3,254,439 + A4249_RS16130 0.85 +0.9
3,254,439 + A4249_RS16130 0.85 -1.0
3,254,439 + A4249_RS16130 0.85 +0.6
3,254,439 + A4249_RS16130 0.85 +0.4
3,254,440 - A4249_RS16130 0.85 +0.5
3,254,440 - A4249_RS16130 0.85 +0.7
3,254,440 - A4249_RS16130 0.85 +0.4
3,254,440 - A4249_RS16130 0.85 -2.1
3,254,440 - A4249_RS16130 0.85 +0.4
3,254,440 - A4249_RS16130 0.85 -0.4
3,254,440 - A4249_RS16130 0.85 +0.2
3,254,440 - A4249_RS16130 0.85 +0.1
3,254,440 - A4249_RS16130 0.85 +0.0
3,254,440 - A4249_RS16130 0.85 +0.3
3,254,440 - A4249_RS16130 0.85 +0.5
3,254,440 - A4249_RS16130 0.85 -0.5
3,254,440 - A4249_RS16130 0.85 +0.0
3,254,440 - A4249_RS16130 0.85 -0.1
3,254,440 - A4249_RS16130 0.85 +0.3
3,254,596 + +1.0
3,254,596 + +0.7
3,254,596 + -0.8
3,254,597 - +0.4
3,254,597 - -0.6
3,254,606 + +0.5
3,254,606 + +0.2
3,254,606 + +1.1
3,254,606 + -0.5
3,254,606 + +0.5
3,254,606 + +0.5
3,254,606 + -1.1
3,254,607 - -0.6
3,254,607 - -0.0
3,254,607 - -0.2
3,254,607 - -0.2
3,254,607 - +0.6
3,254,607 - -0.1
3,254,647 + +0.5
3,254,696 + +0.1
3,255,227 + A4249_RS16135 0.20 +1.5
3,255,228 - A4249_RS16135 0.20 +2.1
3,255,405 - A4249_RS16135 0.28 +0.8
3,255,431 + A4249_RS16135 0.29 +0.3
3,255,432 - A4249_RS16135 0.29 +0.7
3,255,432 - A4249_RS16135 0.29 -0.9
3,255,432 - A4249_RS16135 0.29 +2.1
3,255,432 - A4249_RS16135 0.29 -1.8

Or see this region's nucleotide sequence