Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS15930 and A4249_RS15935 are separated by 41 nucleotides A4249_RS15935 and A4249_RS15940 are separated by 128 nucleotides
A4249_RS15930: A4249_RS15930 - DUF3667 domain-containing protein, at 3,213,590 to 3,214,732
_RS15930
A4249_RS15935: A4249_RS15935 - tol-pal system protein, at 3,214,774 to 3,215,619
_RS15935
A4249_RS15940: A4249_RS15940 - tRNA lysidine(34) synthetase TilS, at 3,215,748 to 3,216,866
_RS15940
Position (kb)
3214
3215
3216 Strain fitness (log2 ratio)
-2
-1
0
1 at 3214.355 kb on + strand, within A4249_RS15930 at 3214.356 kb on - strand, within A4249_RS15930 at 3214.356 kb on - strand, within A4249_RS15930 at 3214.357 kb on + strand, within A4249_RS15930 at 3214.357 kb on + strand, within A4249_RS15930 at 3214.357 kb on + strand, within A4249_RS15930 at 3214.357 kb on + strand, within A4249_RS15930 at 3214.358 kb on - strand, within A4249_RS15930 at 3214.358 kb on - strand, within A4249_RS15930 at 3214.358 kb on - strand, within A4249_RS15930 at 3214.358 kb on - strand, within A4249_RS15930 at 3214.358 kb on - strand, within A4249_RS15930 at 3214.376 kb on + strand, within A4249_RS15930 at 3214.376 kb on + strand, within A4249_RS15930 at 3214.376 kb on + strand, within A4249_RS15930 at 3214.376 kb on + strand, within A4249_RS15930 at 3214.377 kb on - strand, within A4249_RS15930 at 3214.377 kb on - strand, within A4249_RS15930 at 3214.377 kb on - strand, within A4249_RS15930 at 3214.457 kb on + strand, within A4249_RS15930 at 3214.457 kb on + strand, within A4249_RS15930 at 3214.458 kb on - strand, within A4249_RS15930 at 3214.481 kb on + strand, within A4249_RS15930 at 3214.481 kb on + strand, within A4249_RS15930 at 3214.481 kb on + strand, within A4249_RS15930 at 3214.619 kb on + strand at 3214.619 kb on + strand at 3214.619 kb on + strand at 3214.619 kb on + strand at 3214.712 kb on + strand at 3214.712 kb on + strand at 3214.712 kb on + strand at 3214.713 kb on - strand at 3214.713 kb on - strand at 3214.713 kb on - strand at 3214.730 kb on + strand at 3214.731 kb on - strand at 3214.768 kb on - strand at 3214.768 kb on - strand at 3214.768 kb on - strand at 3215.413 kb on + strand, within A4249_RS15935 at 3215.463 kb on + strand, within A4249_RS15935
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 3,214,355 + A4249_RS15930 0.67 -0.4 3,214,356 - A4249_RS15930 0.67 -0.4 3,214,356 - A4249_RS15930 0.67 -0.4 3,214,357 + A4249_RS15930 0.67 -0.0 3,214,357 + A4249_RS15930 0.67 -0.3 3,214,357 + A4249_RS15930 0.67 +0.0 3,214,357 + A4249_RS15930 0.67 -1.0 3,214,358 - A4249_RS15930 0.67 -0.9 3,214,358 - A4249_RS15930 0.67 -0.3 3,214,358 - A4249_RS15930 0.67 -1.1 3,214,358 - A4249_RS15930 0.67 -0.6 3,214,358 - A4249_RS15930 0.67 -0.0 3,214,376 + A4249_RS15930 0.69 +1.0 3,214,376 + A4249_RS15930 0.69 -0.4 3,214,376 + A4249_RS15930 0.69 -0.3 3,214,376 + A4249_RS15930 0.69 -1.6 3,214,377 - A4249_RS15930 0.69 -0.0 3,214,377 - A4249_RS15930 0.69 -0.8 3,214,377 - A4249_RS15930 0.69 +0.1 3,214,457 + A4249_RS15930 0.76 -0.4 3,214,457 + A4249_RS15930 0.76 +0.1 3,214,458 - A4249_RS15930 0.76 +0.4 3,214,481 + A4249_RS15930 0.78 +0.2 3,214,481 + A4249_RS15930 0.78 -1.0 3,214,481 + A4249_RS15930 0.78 -0.9 3,214,619 + -1.1 3,214,619 + -0.7 3,214,619 + +1.0 3,214,619 + -0.1 3,214,712 + +0.0 3,214,712 + -0.2 3,214,712 + +0.2 3,214,713 - -0.5 3,214,713 - +0.3 3,214,713 - -0.0 3,214,730 + +0.1 3,214,731 - -0.2 3,214,768 - -2.0 3,214,768 - +0.0 3,214,768 - +0.5 3,215,413 + A4249_RS15935 0.76 -0.2 3,215,463 + A4249_RS15935 0.81 -0.2
Or see this region's nucleotide sequence