Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS15580 and A4249_RS15585 are separated by 15 nucleotides A4249_RS15585 and A4249_RS15590 overlap by 4 nucleotides A4249_RS15590 and A4249_RS15595 are separated by 2 nucleotides A4249_RS15595 and A4249_RS15600 are separated by 4 nucleotides A4249_RS15600 and A4249_RS15605 overlap by 4 nucleotides
A4249_RS15580: A4249_RS15580 - chemotaxis response regulator protein-glutamate methylesterase, at 3,154,485 to 3,155,522
_RS15580
A4249_RS15585: A4249_RS15585 - response regulator, at 3,155,538 to 3,155,927
_RS15585
A4249_RS15590: A4249_RS15590 - chemotaxis protein CheD, at 3,155,924 to 3,156,466
_RS15590
A4249_RS15595: A4249_RS15595 - hypothetical protein, at 3,156,469 to 3,156,813
_RS15595
A4249_RS15600: A4249_RS15600 - response regulator, at 3,156,818 to 3,157,408
_RS15600
A4249_RS15605: A4249_RS15605 - hypothetical protein, at 3,157,405 to 3,157,884
_RS15605
Position (kb)
3155
3156
3157 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3154.924 kb on - strand, within A4249_RS15580 at 3155.042 kb on + strand, within A4249_RS15580 at 3155.042 kb on + strand, within A4249_RS15580 at 3155.042 kb on + strand, within A4249_RS15580 at 3155.042 kb on + strand, within A4249_RS15580 at 3155.042 kb on + strand, within A4249_RS15580 at 3155.042 kb on + strand, within A4249_RS15580 at 3155.042 kb on + strand, within A4249_RS15580 at 3155.042 kb on + strand, within A4249_RS15580 at 3155.042 kb on + strand, within A4249_RS15580 at 3155.042 kb on + strand, within A4249_RS15580 at 3155.042 kb on + strand, within A4249_RS15580 at 3155.042 kb on + strand, within A4249_RS15580 at 3155.042 kb on + strand, within A4249_RS15580 at 3155.043 kb on - strand, within A4249_RS15580 at 3155.043 kb on - strand, within A4249_RS15580 at 3155.043 kb on - strand, within A4249_RS15580 at 3155.043 kb on - strand, within A4249_RS15580 at 3155.043 kb on - strand, within A4249_RS15580 at 3155.043 kb on - strand, within A4249_RS15580 at 3155.043 kb on - strand, within A4249_RS15580 at 3155.043 kb on - strand, within A4249_RS15580 at 3155.043 kb on - strand, within A4249_RS15580 at 3155.043 kb on - strand, within A4249_RS15580 at 3155.043 kb on - strand, within A4249_RS15580 at 3155.043 kb on - strand, within A4249_RS15580 at 3155.043 kb on - strand, within A4249_RS15580 at 3155.148 kb on + strand, within A4249_RS15580 at 3155.148 kb on + strand, within A4249_RS15580 at 3155.148 kb on + strand, within A4249_RS15580 at 3155.148 kb on + strand, within A4249_RS15580 at 3155.148 kb on + strand, within A4249_RS15580 at 3155.148 kb on + strand, within A4249_RS15580 at 3155.148 kb on + strand, within A4249_RS15580 at 3155.149 kb on - strand, within A4249_RS15580 at 3155.149 kb on - strand, within A4249_RS15580 at 3155.149 kb on - strand, within A4249_RS15580 at 3155.149 kb on - strand, within A4249_RS15580 at 3155.149 kb on - strand, within A4249_RS15580 at 3155.149 kb on - strand, within A4249_RS15580 at 3155.403 kb on + strand, within A4249_RS15580 at 3155.404 kb on - strand, within A4249_RS15580 at 3155.404 kb on - strand, within A4249_RS15580 at 3155.424 kb on + strand at 3155.521 kb on - strand at 3155.532 kb on + strand at 3155.532 kb on + strand at 3155.537 kb on + strand at 3155.537 kb on + strand at 3155.537 kb on + strand at 3155.537 kb on + strand at 3155.537 kb on + strand at 3155.537 kb on + strand at 3155.537 kb on + strand at 3155.537 kb on + strand at 3155.538 kb on - strand at 3155.538 kb on - strand at 3155.538 kb on - strand at 3155.538 kb on - strand at 3155.538 kb on - strand at 3155.712 kb on + strand, within A4249_RS15585 at 3155.713 kb on - strand, within A4249_RS15585 at 3155.713 kb on - strand, within A4249_RS15585 at 3155.713 kb on - strand, within A4249_RS15585 at 3155.713 kb on - strand, within A4249_RS15585 at 3155.717 kb on + strand, within A4249_RS15585 at 3155.717 kb on + strand, within A4249_RS15585 at 3155.717 kb on + strand, within A4249_RS15585 at 3155.717 kb on + strand, within A4249_RS15585 at 3155.717 kb on + strand, within A4249_RS15585 at 3155.717 kb on + strand, within A4249_RS15585 at 3155.718 kb on - strand, within A4249_RS15585 at 3155.718 kb on - strand, within A4249_RS15585 at 3155.718 kb on - strand, within A4249_RS15585 at 3155.718 kb on - strand, within A4249_RS15585 at 3155.718 kb on - strand, within A4249_RS15585 at 3155.718 kb on - strand, within A4249_RS15585 at 3155.718 kb on - strand, within A4249_RS15585 at 3155.718 kb on - strand, within A4249_RS15585 at 3155.718 kb on - strand, within A4249_RS15585 at 3155.718 kb on - strand, within A4249_RS15585 at 3155.718 kb on - strand, within A4249_RS15585 at 3155.718 kb on - strand, within A4249_RS15585 at 3155.718 kb on - strand, within A4249_RS15585 at 3155.718 kb on - strand, within A4249_RS15585 at 3155.718 kb on - strand, within A4249_RS15585 at 3155.718 kb on - strand, within A4249_RS15585 at 3155.718 kb on - strand, within A4249_RS15585 at 3155.718 kb on - strand, within A4249_RS15585 at 3155.856 kb on + strand, within A4249_RS15585 at 3155.856 kb on + strand, within A4249_RS15585 at 3155.856 kb on + strand, within A4249_RS15585 at 3155.856 kb on + strand, within A4249_RS15585 at 3155.856 kb on + strand, within A4249_RS15585 at 3155.856 kb on + strand, within A4249_RS15585 at 3155.857 kb on - strand, within A4249_RS15585 at 3155.857 kb on - strand, within A4249_RS15585 at 3155.857 kb on - strand, within A4249_RS15585 at 3155.857 kb on - strand, within A4249_RS15585 at 3155.857 kb on - strand, within A4249_RS15585 at 3155.857 kb on - strand, within A4249_RS15585 at 3155.857 kb on - strand, within A4249_RS15585 at 3156.147 kb on - strand, within A4249_RS15590 at 3156.232 kb on + strand, within A4249_RS15590 at 3156.232 kb on + strand, within A4249_RS15590 at 3156.232 kb on + strand, within A4249_RS15590 at 3156.232 kb on + strand, within A4249_RS15590 at 3156.232 kb on + strand, within A4249_RS15590 at 3156.356 kb on + strand, within A4249_RS15590 at 3156.356 kb on + strand, within A4249_RS15590 at 3156.356 kb on + strand, within A4249_RS15590 at 3156.357 kb on - strand, within A4249_RS15590 at 3156.357 kb on - strand, within A4249_RS15590 at 3156.464 kb on + strand at 3156.464 kb on + strand at 3156.464 kb on + strand at 3156.464 kb on + strand at 3156.464 kb on + strand at 3156.464 kb on + strand at 3156.464 kb on + strand at 3156.464 kb on + strand at 3156.464 kb on + strand at 3156.464 kb on + strand at 3156.464 kb on + strand at 3156.464 kb on + strand at 3156.464 kb on + strand at 3156.465 kb on - strand at 3156.465 kb on - strand at 3156.465 kb on - strand at 3156.465 kb on - strand at 3156.465 kb on - strand at 3156.465 kb on - strand at 3156.465 kb on - strand at 3156.465 kb on - strand at 3156.465 kb on - strand at 3156.465 kb on - strand at 3156.465 kb on - strand at 3156.675 kb on + strand, within A4249_RS15595 at 3156.675 kb on + strand, within A4249_RS15595 at 3156.675 kb on + strand, within A4249_RS15595 at 3156.675 kb on + strand, within A4249_RS15595 at 3156.675 kb on + strand, within A4249_RS15595 at 3156.676 kb on - strand, within A4249_RS15595 at 3156.676 kb on - strand, within A4249_RS15595 at 3156.676 kb on - strand, within A4249_RS15595 at 3156.676 kb on - strand, within A4249_RS15595 at 3156.892 kb on + strand, within A4249_RS15600 at 3156.893 kb on - strand, within A4249_RS15600 at 3157.032 kb on - strand, within A4249_RS15600 at 3157.079 kb on + strand, within A4249_RS15600 at 3157.080 kb on - strand, within A4249_RS15600 at 3157.080 kb on - strand, within A4249_RS15600 at 3157.247 kb on + strand, within A4249_RS15600 at 3157.247 kb on + strand, within A4249_RS15600 at 3157.247 kb on + strand, within A4249_RS15600 at 3157.247 kb on + strand, within A4249_RS15600 at 3157.248 kb on - strand, within A4249_RS15600 at 3157.248 kb on - strand, within A4249_RS15600 at 3157.248 kb on - strand, within A4249_RS15600 at 3157.248 kb on - strand, within A4249_RS15600 at 3157.248 kb on - strand, within A4249_RS15600 at 3157.248 kb on - strand, within A4249_RS15600 at 3157.277 kb on + strand, within A4249_RS15600 at 3157.277 kb on + strand, within A4249_RS15600 at 3157.277 kb on + strand, within A4249_RS15600 at 3157.277 kb on + strand, within A4249_RS15600 at 3157.278 kb on - strand, within A4249_RS15600 at 3157.278 kb on - strand, within A4249_RS15600 at 3157.278 kb on - strand, within A4249_RS15600 at 3157.278 kb on - strand, within A4249_RS15600
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 3,154,924 - A4249_RS15580 0.42 -0.1 3,155,042 + A4249_RS15580 0.54 -0.0 3,155,042 + A4249_RS15580 0.54 -1.5 3,155,042 + A4249_RS15580 0.54 +0.4 3,155,042 + A4249_RS15580 0.54 -1.5 3,155,042 + A4249_RS15580 0.54 -0.3 3,155,042 + A4249_RS15580 0.54 -1.1 3,155,042 + A4249_RS15580 0.54 +1.3 3,155,042 + A4249_RS15580 0.54 -0.1 3,155,042 + A4249_RS15580 0.54 +0.7 3,155,042 + A4249_RS15580 0.54 -3.0 3,155,042 + A4249_RS15580 0.54 -2.4 3,155,042 + A4249_RS15580 0.54 -0.7 3,155,042 + A4249_RS15580 0.54 -0.6 3,155,043 - A4249_RS15580 0.54 -0.1 3,155,043 - A4249_RS15580 0.54 -0.5 3,155,043 - A4249_RS15580 0.54 +1.3 3,155,043 - A4249_RS15580 0.54 -0.2 3,155,043 - A4249_RS15580 0.54 -0.3 3,155,043 - A4249_RS15580 0.54 +0.3 3,155,043 - A4249_RS15580 0.54 -1.0 3,155,043 - A4249_RS15580 0.54 -1.7 3,155,043 - A4249_RS15580 0.54 +0.1 3,155,043 - A4249_RS15580 0.54 +0.2 3,155,043 - A4249_RS15580 0.54 -0.4 3,155,043 - A4249_RS15580 0.54 -0.1 3,155,043 - A4249_RS15580 0.54 +0.0 3,155,148 + A4249_RS15580 0.64 +0.1 3,155,148 + A4249_RS15580 0.64 -0.6 3,155,148 + A4249_RS15580 0.64 +0.6 3,155,148 + A4249_RS15580 0.64 +0.0 3,155,148 + A4249_RS15580 0.64 +0.9 3,155,148 + A4249_RS15580 0.64 +0.0 3,155,148 + A4249_RS15580 0.64 -0.2 3,155,149 - A4249_RS15580 0.64 -0.3 3,155,149 - A4249_RS15580 0.64 +0.3 3,155,149 - A4249_RS15580 0.64 -0.9 3,155,149 - A4249_RS15580 0.64 -1.0 3,155,149 - A4249_RS15580 0.64 +0.2 3,155,149 - A4249_RS15580 0.64 -0.5 3,155,403 + A4249_RS15580 0.88 -0.2 3,155,404 - A4249_RS15580 0.89 -0.9 3,155,404 - A4249_RS15580 0.89 -1.0 3,155,424 + -0.1 3,155,521 - +0.5 3,155,532 + -0.9 3,155,532 + -0.0 3,155,537 + +0.3 3,155,537 + +1.1 3,155,537 + -0.0 3,155,537 + +0.4 3,155,537 + +0.2 3,155,537 + -0.5 3,155,537 + +1.0 3,155,537 + -0.1 3,155,538 - +1.4 3,155,538 - +0.1 3,155,538 - -1.3 3,155,538 - -0.4 3,155,538 - -0.6 3,155,712 + A4249_RS15585 0.45 -0.2 3,155,713 - A4249_RS15585 0.45 -0.7 3,155,713 - A4249_RS15585 0.45 +1.3 3,155,713 - A4249_RS15585 0.45 -0.8 3,155,713 - A4249_RS15585 0.45 -0.2 3,155,717 + A4249_RS15585 0.46 +0.5 3,155,717 + A4249_RS15585 0.46 +0.4 3,155,717 + A4249_RS15585 0.46 +1.5 3,155,717 + A4249_RS15585 0.46 +0.1 3,155,717 + A4249_RS15585 0.46 -1.7 3,155,717 + A4249_RS15585 0.46 +0.4 3,155,718 - A4249_RS15585 0.46 -0.8 3,155,718 - A4249_RS15585 0.46 -0.1 3,155,718 - A4249_RS15585 0.46 +0.3 3,155,718 - A4249_RS15585 0.46 +0.7 3,155,718 - A4249_RS15585 0.46 -1.2 3,155,718 - A4249_RS15585 0.46 -0.5 3,155,718 - A4249_RS15585 0.46 +0.5 3,155,718 - A4249_RS15585 0.46 -0.1 3,155,718 - A4249_RS15585 0.46 -0.1 3,155,718 - A4249_RS15585 0.46 +0.0 3,155,718 - A4249_RS15585 0.46 -1.8 3,155,718 - A4249_RS15585 0.46 -0.4 3,155,718 - A4249_RS15585 0.46 -0.3 3,155,718 - A4249_RS15585 0.46 -0.2 3,155,718 - A4249_RS15585 0.46 -0.8 3,155,718 - A4249_RS15585 0.46 -0.5 3,155,718 - A4249_RS15585 0.46 +0.1 3,155,718 - A4249_RS15585 0.46 -0.2 3,155,856 + A4249_RS15585 0.82 -0.9 3,155,856 + A4249_RS15585 0.82 -1.0 3,155,856 + A4249_RS15585 0.82 +0.4 3,155,856 + A4249_RS15585 0.82 +1.0 3,155,856 + A4249_RS15585 0.82 -1.3 3,155,856 + A4249_RS15585 0.82 -0.2 3,155,857 - A4249_RS15585 0.82 -0.1 3,155,857 - A4249_RS15585 0.82 -0.6 3,155,857 - A4249_RS15585 0.82 +0.7 3,155,857 - A4249_RS15585 0.82 -0.4 3,155,857 - A4249_RS15585 0.82 -0.4 3,155,857 - A4249_RS15585 0.82 -0.1 3,155,857 - A4249_RS15585 0.82 +0.3 3,156,147 - A4249_RS15590 0.41 -0.5 3,156,232 + A4249_RS15590 0.57 -0.0 3,156,232 + A4249_RS15590 0.57 -0.3 3,156,232 + A4249_RS15590 0.57 -0.6 3,156,232 + A4249_RS15590 0.57 +0.2 3,156,232 + A4249_RS15590 0.57 -1.4 3,156,356 + A4249_RS15590 0.80 -0.4 3,156,356 + A4249_RS15590 0.80 +0.9 3,156,356 + A4249_RS15590 0.80 -0.6 3,156,357 - A4249_RS15590 0.80 -0.3 3,156,357 - A4249_RS15590 0.80 +0.8 3,156,464 + -0.0 3,156,464 + -0.1 3,156,464 + -0.6 3,156,464 + +0.2 3,156,464 + -0.3 3,156,464 + -0.8 3,156,464 + -0.1 3,156,464 + -0.7 3,156,464 + -0.6 3,156,464 + +0.3 3,156,464 + -0.6 3,156,464 + -1.5 3,156,464 + +0.2 3,156,465 - +0.6 3,156,465 - -0.8 3,156,465 - +0.8 3,156,465 - -0.1 3,156,465 - +0.8 3,156,465 - +0.1 3,156,465 - -0.1 3,156,465 - -0.2 3,156,465 - -0.9 3,156,465 - -0.2 3,156,465 - +0.3 3,156,675 + A4249_RS15595 0.60 +0.1 3,156,675 + A4249_RS15595 0.60 -0.2 3,156,675 + A4249_RS15595 0.60 +0.3 3,156,675 + A4249_RS15595 0.60 +0.1 3,156,675 + A4249_RS15595 0.60 -1.2 3,156,676 - A4249_RS15595 0.60 -0.5 3,156,676 - A4249_RS15595 0.60 +0.4 3,156,676 - A4249_RS15595 0.60 -1.6 3,156,676 - A4249_RS15595 0.60 -2.6 3,156,892 + A4249_RS15600 0.13 -1.5 3,156,893 - A4249_RS15600 0.13 +0.9 3,157,032 - A4249_RS15600 0.36 +0.2 3,157,079 + A4249_RS15600 0.44 +0.5 3,157,080 - A4249_RS15600 0.44 -1.0 3,157,080 - A4249_RS15600 0.44 -0.5 3,157,247 + A4249_RS15600 0.73 +0.3 3,157,247 + A4249_RS15600 0.73 -0.5 3,157,247 + A4249_RS15600 0.73 +0.6 3,157,247 + A4249_RS15600 0.73 -0.2 3,157,248 - A4249_RS15600 0.73 -0.4 3,157,248 - A4249_RS15600 0.73 +0.3 3,157,248 - A4249_RS15600 0.73 +0.5 3,157,248 - A4249_RS15600 0.73 +0.4 3,157,248 - A4249_RS15600 0.73 +0.1 3,157,248 - A4249_RS15600 0.73 +0.3 3,157,277 + A4249_RS15600 0.78 -0.2 3,157,277 + A4249_RS15600 0.78 -0.8 3,157,277 + A4249_RS15600 0.78 +0.5 3,157,277 + A4249_RS15600 0.78 -0.1 3,157,278 - A4249_RS15600 0.78 -0.2 3,157,278 - A4249_RS15600 0.78 -0.0 3,157,278 - A4249_RS15600 0.78 +0.0 3,157,278 - A4249_RS15600 0.78 +0.1
Or see this region's nucleotide sequence