Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS15075

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS15070 and A4249_RS15075 are separated by 87 nucleotidesA4249_RS15075 and A4249_RS15080 are separated by 9 nucleotides A4249_RS15070: A4249_RS15070 - ActS/PrrB/RegB family redox-sensitive histidine kinase, at 3,048,676 to 3,050,130 _RS15070 A4249_RS15075: A4249_RS15075 - ActR/PrrA/RegA family redox response regulator transcription factor, at 3,050,218 to 3,050,772 _RS15075 A4249_RS15080: A4249_RS15080 - DNA polymerase III subunit gamma/tau, at 3,050,782 to 3,052,629 _RS15080 Position (kb) 3050 3051Strain fitness (log2 ratio) -2 -1 0 1at 3049.264 kb on + strand, within A4249_RS15070at 3049.559 kb on - strand, within A4249_RS15070at 3049.559 kb on - strand, within A4249_RS15070at 3049.849 kb on + strand, within A4249_RS15070at 3049.849 kb on + strand, within A4249_RS15070at 3049.849 kb on + strand, within A4249_RS15070at 3049.849 kb on + strand, within A4249_RS15070at 3049.850 kb on - strand, within A4249_RS15070at 3049.850 kb on - strand, within A4249_RS15070at 3049.850 kb on - strand, within A4249_RS15070at 3050.548 kb on + strand, within A4249_RS15075at 3050.548 kb on + strand, within A4249_RS15075at 3050.548 kb on + strand, within A4249_RS15075at 3050.549 kb on - strand, within A4249_RS15075at 3050.549 kb on - strand, within A4249_RS15075at 3050.549 kb on - strand, within A4249_RS15075at 3050.661 kb on + strand, within A4249_RS15075at 3050.661 kb on + strand, within A4249_RS15075at 3050.661 kb on + strand, within A4249_RS15075at 3050.661 kb on + strand, within A4249_RS15075at 3050.661 kb on + strand, within A4249_RS15075at 3050.661 kb on + strand, within A4249_RS15075at 3050.661 kb on + strand, within A4249_RS15075at 3050.661 kb on + strand, within A4249_RS15075at 3050.661 kb on + strand, within A4249_RS15075at 3050.662 kb on - strand, within A4249_RS15075at 3050.662 kb on - strand, within A4249_RS15075at 3050.662 kb on - strand, within A4249_RS15075at 3050.662 kb on - strand, within A4249_RS15075at 3050.662 kb on - strand, within A4249_RS15075at 3050.662 kb on - strand, within A4249_RS15075at 3050.662 kb on - strand, within A4249_RS15075at 3050.662 kb on - strand, within A4249_RS15075at 3050.662 kb on - strand, within A4249_RS15075at 3050.662 kb on - strand, within A4249_RS15075at 3050.674 kb on + strand, within A4249_RS15075

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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3,049,264 + A4249_RS15070 0.40 -0.4
3,049,559 - A4249_RS15070 0.61 -0.2
3,049,559 - A4249_RS15070 0.61 -0.2
3,049,849 + A4249_RS15070 0.81 +0.1
3,049,849 + A4249_RS15070 0.81 -0.4
3,049,849 + A4249_RS15070 0.81 -0.1
3,049,849 + A4249_RS15070 0.81 -0.3
3,049,850 - A4249_RS15070 0.81 -0.2
3,049,850 - A4249_RS15070 0.81 -0.1
3,049,850 - A4249_RS15070 0.81 -0.1
3,050,548 + A4249_RS15075 0.59 -0.2
3,050,548 + A4249_RS15075 0.59 -0.5
3,050,548 + A4249_RS15075 0.59 -0.3
3,050,549 - A4249_RS15075 0.60 +0.1
3,050,549 - A4249_RS15075 0.60 -0.3
3,050,549 - A4249_RS15075 0.60 +0.4
3,050,661 + A4249_RS15075 0.80 +0.1
3,050,661 + A4249_RS15075 0.80 -1.8
3,050,661 + A4249_RS15075 0.80 -0.4
3,050,661 + A4249_RS15075 0.80 +0.2
3,050,661 + A4249_RS15075 0.80 +1.1
3,050,661 + A4249_RS15075 0.80 -0.1
3,050,661 + A4249_RS15075 0.80 -0.2
3,050,661 + A4249_RS15075 0.80 +0.5
3,050,661 + A4249_RS15075 0.80 +0.2
3,050,662 - A4249_RS15075 0.80 +0.2
3,050,662 - A4249_RS15075 0.80 -0.5
3,050,662 - A4249_RS15075 0.80 +0.1
3,050,662 - A4249_RS15075 0.80 -0.1
3,050,662 - A4249_RS15075 0.80 +0.1
3,050,662 - A4249_RS15075 0.80 -0.6
3,050,662 - A4249_RS15075 0.80 +1.7
3,050,662 - A4249_RS15075 0.80 +1.1
3,050,662 - A4249_RS15075 0.80 +0.4
3,050,662 - A4249_RS15075 0.80 +0.3
3,050,674 + A4249_RS15075 0.82 -0.0

Or see this region's nucleotide sequence