Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14930

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS14925 and A4249_RS14930 are separated by 61 nucleotidesA4249_RS14930 and A4249_RS14935 are separated by 57 nucleotidesA4249_RS14935 and A4249_RS14940 are separated by 210 nucleotides A4249_RS14925: A4249_RS14925 - deoxyhypusine synthase, at 3,020,371 to 3,021,420 _RS14925 A4249_RS14930: A4249_RS14930 - GTP-binding protein, at 3,021,482 to 3,022,603 _RS14930 A4249_RS14935: A4249_RS14935 - alkylphosphonate utilization protein, at 3,022,661 to 3,022,885 _RS14935 A4249_RS14940: A4249_RS14940 - NAD(+) synthase, at 3,023,096 to 3,025,135 _RS14940 Position (kb) 3021 3022 3023Strain fitness (log2 ratio) -2 -1 0 1at 3020.603 kb on - strand, within A4249_RS14925at 3020.603 kb on - strand, within A4249_RS14925at 3020.611 kb on - strand, within A4249_RS14925at 3020.701 kb on + strand, within A4249_RS14925at 3020.702 kb on - strand, within A4249_RS14925at 3020.702 kb on - strand, within A4249_RS14925at 3020.702 kb on - strand, within A4249_RS14925at 3020.702 kb on - strand, within A4249_RS14925at 3020.746 kb on + strand, within A4249_RS14925at 3020.746 kb on + strand, within A4249_RS14925at 3020.746 kb on + strand, within A4249_RS14925at 3020.746 kb on + strand, within A4249_RS14925at 3020.746 kb on + strand, within A4249_RS14925at 3020.747 kb on - strand, within A4249_RS14925at 3020.747 kb on - strand, within A4249_RS14925at 3020.747 kb on - strand, within A4249_RS14925at 3020.747 kb on - strand, within A4249_RS14925at 3020.747 kb on - strand, within A4249_RS14925at 3020.747 kb on - strand, within A4249_RS14925at 3020.747 kb on - strand, within A4249_RS14925at 3020.747 kb on - strand, within A4249_RS14925at 3020.761 kb on + strand, within A4249_RS14925at 3020.761 kb on + strand, within A4249_RS14925at 3020.762 kb on - strand, within A4249_RS14925at 3020.762 kb on - strand, within A4249_RS14925at 3020.762 kb on - strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.771 kb on - strand, within A4249_RS14925at 3020.771 kb on - strand, within A4249_RS14925at 3020.771 kb on - strand, within A4249_RS14925at 3020.771 kb on - strand, within A4249_RS14925at 3020.771 kb on - strand, within A4249_RS14925at 3020.771 kb on - strand, within A4249_RS14925at 3020.771 kb on - strand, within A4249_RS14925at 3020.771 kb on - strand, within A4249_RS14925at 3020.771 kb on - strand, within A4249_RS14925at 3020.771 kb on - strand, within A4249_RS14925at 3020.771 kb on - strand, within A4249_RS14925at 3020.771 kb on - strand, within A4249_RS14925at 3020.771 kb on - strand, within A4249_RS14925at 3020.771 kb on - strand, within A4249_RS14925at 3020.771 kb on - strand, within A4249_RS14925at 3020.771 kb on - strand, within A4249_RS14925at 3020.771 kb on - strand, within A4249_RS14925at 3020.771 kb on - strand, within A4249_RS14925at 3020.773 kb on - strand, within A4249_RS14925at 3020.773 kb on - strand, within A4249_RS14925at 3020.877 kb on + strand, within A4249_RS14925at 3020.877 kb on + strand, within A4249_RS14925at 3020.877 kb on + strand, within A4249_RS14925at 3020.877 kb on + strand, within A4249_RS14925at 3020.877 kb on + strand, within A4249_RS14925at 3020.877 kb on + strand, within A4249_RS14925at 3020.877 kb on + strand, within A4249_RS14925at 3020.878 kb on - strand, within A4249_RS14925at 3020.878 kb on - strand, within A4249_RS14925at 3020.878 kb on - strand, within A4249_RS14925at 3020.878 kb on - strand, within A4249_RS14925at 3020.878 kb on - strand, within A4249_RS14925at 3020.878 kb on - strand, within A4249_RS14925at 3020.878 kb on - strand, within A4249_RS14925at 3020.878 kb on - strand, within A4249_RS14925at 3020.932 kb on + strand, within A4249_RS14925at 3020.932 kb on + strand, within A4249_RS14925at 3020.933 kb on - strand, within A4249_RS14925at 3021.034 kb on + strand, within A4249_RS14925at 3021.035 kb on - strand, within A4249_RS14925at 3021.035 kb on - strand, within A4249_RS14925at 3021.035 kb on - strand, within A4249_RS14925at 3021.035 kb on - strand, within A4249_RS14925at 3021.035 kb on - strand, within A4249_RS14925at 3021.199 kb on + strand, within A4249_RS14925at 3021.199 kb on + strand, within A4249_RS14925at 3021.200 kb on - strand, within A4249_RS14925at 3021.355 kb on + strandat 3021.590 kb on + strandat 3021.591 kb on - strandat 3021.591 kb on - strandat 3021.591 kb on - strandat 3022.274 kb on + strand, within A4249_RS14930at 3022.275 kb on - strand, within A4249_RS14930at 3022.275 kb on - strand, within A4249_RS14930at 3022.465 kb on - strand, within A4249_RS14930at 3022.527 kb on + strandat 3022.527 kb on + strandat 3022.603 kb on + strandat 3022.604 kb on - strandat 3022.604 kb on - strandat 3022.604 kb on - strandat 3022.611 kb on + strandat 3022.611 kb on + strandat 3022.612 kb on - strandat 3022.612 kb on - strandat 3022.612 kb on - strandat 3022.662 kb on + strandat 3022.662 kb on + strandat 3022.662 kb on + strandat 3022.663 kb on - strandat 3022.663 kb on - strandat 3022.663 kb on - strandat 3022.898 kb on - strandat 3023.014 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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3,020,603 - A4249_RS14925 0.22 -0.5
3,020,603 - A4249_RS14925 0.22 -0.2
3,020,611 - A4249_RS14925 0.23 -0.2
3,020,701 + A4249_RS14925 0.31 +0.3
3,020,702 - A4249_RS14925 0.32 -0.3
3,020,702 - A4249_RS14925 0.32 -0.9
3,020,702 - A4249_RS14925 0.32 +0.9
3,020,702 - A4249_RS14925 0.32 +0.2
3,020,746 + A4249_RS14925 0.36 +0.0
3,020,746 + A4249_RS14925 0.36 -0.5
3,020,746 + A4249_RS14925 0.36 -0.0
3,020,746 + A4249_RS14925 0.36 -0.2
3,020,746 + A4249_RS14925 0.36 -1.5
3,020,747 - A4249_RS14925 0.36 -0.1
3,020,747 - A4249_RS14925 0.36 -1.5
3,020,747 - A4249_RS14925 0.36 -0.8
3,020,747 - A4249_RS14925 0.36 +0.4
3,020,747 - A4249_RS14925 0.36 -0.1
3,020,747 - A4249_RS14925 0.36 +1.6
3,020,747 - A4249_RS14925 0.36 +0.5
3,020,747 - A4249_RS14925 0.36 +0.4
3,020,761 + A4249_RS14925 0.37 -0.4
3,020,761 + A4249_RS14925 0.37 +1.4
3,020,762 - A4249_RS14925 0.37 +0.7
3,020,762 - A4249_RS14925 0.37 +1.0
3,020,762 - A4249_RS14925 0.37 -0.1
3,020,770 + A4249_RS14925 0.38 -0.6
3,020,770 + A4249_RS14925 0.38 -2.0
3,020,770 + A4249_RS14925 0.38 -0.2
3,020,770 + A4249_RS14925 0.38 -0.9
3,020,770 + A4249_RS14925 0.38 -0.4
3,020,770 + A4249_RS14925 0.38 +0.1
3,020,770 + A4249_RS14925 0.38 +0.5
3,020,770 + A4249_RS14925 0.38 -0.7
3,020,770 + A4249_RS14925 0.38 +0.9
3,020,770 + A4249_RS14925 0.38 +0.4
3,020,770 + A4249_RS14925 0.38 +0.3
3,020,770 + A4249_RS14925 0.38 +0.1
3,020,770 + A4249_RS14925 0.38 +1.3
3,020,770 + A4249_RS14925 0.38 -0.9
3,020,770 + A4249_RS14925 0.38 +0.5
3,020,770 + A4249_RS14925 0.38 +0.1
3,020,770 + A4249_RS14925 0.38 +0.3
3,020,770 + A4249_RS14925 0.38 -0.3
3,020,770 + A4249_RS14925 0.38 -0.6
3,020,770 + A4249_RS14925 0.38 -1.3
3,020,770 + A4249_RS14925 0.38 +0.2
3,020,771 - A4249_RS14925 0.38 -0.5
3,020,771 - A4249_RS14925 0.38 +0.3
3,020,771 - A4249_RS14925 0.38 +0.0
3,020,771 - A4249_RS14925 0.38 -0.1
3,020,771 - A4249_RS14925 0.38 +1.0
3,020,771 - A4249_RS14925 0.38 +1.7
3,020,771 - A4249_RS14925 0.38 -0.9
3,020,771 - A4249_RS14925 0.38 +0.1
3,020,771 - A4249_RS14925 0.38 -0.3
3,020,771 - A4249_RS14925 0.38 +0.1
3,020,771 - A4249_RS14925 0.38 -1.5
3,020,771 - A4249_RS14925 0.38 -0.4
3,020,771 - A4249_RS14925 0.38 -0.3
3,020,771 - A4249_RS14925 0.38 -0.3
3,020,771 - A4249_RS14925 0.38 +0.1
3,020,771 - A4249_RS14925 0.38 -0.3
3,020,771 - A4249_RS14925 0.38 -0.9
3,020,771 - A4249_RS14925 0.38 +1.1
3,020,773 - A4249_RS14925 0.38 +0.1
3,020,773 - A4249_RS14925 0.38 +0.3
3,020,877 + A4249_RS14925 0.48 -2.0
3,020,877 + A4249_RS14925 0.48 -0.8
3,020,877 + A4249_RS14925 0.48 +0.2
3,020,877 + A4249_RS14925 0.48 -0.7
3,020,877 + A4249_RS14925 0.48 -0.7
3,020,877 + A4249_RS14925 0.48 -0.1
3,020,877 + A4249_RS14925 0.48 -0.4
3,020,878 - A4249_RS14925 0.48 -0.4
3,020,878 - A4249_RS14925 0.48 -1.7
3,020,878 - A4249_RS14925 0.48 -0.7
3,020,878 - A4249_RS14925 0.48 -1.1
3,020,878 - A4249_RS14925 0.48 +0.1
3,020,878 - A4249_RS14925 0.48 +0.4
3,020,878 - A4249_RS14925 0.48 -0.1
3,020,878 - A4249_RS14925 0.48 +0.4
3,020,932 + A4249_RS14925 0.53 +0.9
3,020,932 + A4249_RS14925 0.53 -0.2
3,020,933 - A4249_RS14925 0.54 -0.1
3,021,034 + A4249_RS14925 0.63 -0.3
3,021,035 - A4249_RS14925 0.63 -0.2
3,021,035 - A4249_RS14925 0.63 -0.4
3,021,035 - A4249_RS14925 0.63 -1.2
3,021,035 - A4249_RS14925 0.63 +0.3
3,021,035 - A4249_RS14925 0.63 -0.3
3,021,199 + A4249_RS14925 0.79 -0.6
3,021,199 + A4249_RS14925 0.79 +0.8
3,021,200 - A4249_RS14925 0.79 +0.1
3,021,355 + -0.4
3,021,590 + -0.6
3,021,591 - +0.1
3,021,591 - +1.0
3,021,591 - -0.0
3,022,274 + A4249_RS14930 0.71 +1.7
3,022,275 - A4249_RS14930 0.71 +0.1
3,022,275 - A4249_RS14930 0.71 +0.1
3,022,465 - A4249_RS14930 0.88 +1.1
3,022,527 + -0.7
3,022,527 + -0.0
3,022,603 + -0.6
3,022,604 - +0.8
3,022,604 - -0.2
3,022,604 - -0.1
3,022,611 + -1.9
3,022,611 + -1.1
3,022,612 - +1.3
3,022,612 - +0.3
3,022,612 - +0.1
3,022,662 + +1.1
3,022,662 + +0.7
3,022,662 + +0.1
3,022,663 - -0.3
3,022,663 - -0.2
3,022,663 - -2.2
3,022,898 - -0.8
3,023,014 - -1.0

Or see this region's nucleotide sequence