Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14925

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS14915 and A4249_RS14920 are separated by 6 nucleotidesA4249_RS14920 and A4249_RS14925 are separated by 66 nucleotidesA4249_RS14925 and A4249_RS14930 are separated by 61 nucleotides A4249_RS14915: A4249_RS14915 - type III PLP-dependent enzyme, at 3,018,586 to 3,019,851 _RS14915 A4249_RS14920: A4249_RS14920 - GNAT family N-acetyltransferase, at 3,019,858 to 3,020,304 _RS14920 A4249_RS14925: A4249_RS14925 - deoxyhypusine synthase, at 3,020,371 to 3,021,420 _RS14925 A4249_RS14930: A4249_RS14930 - GTP-binding protein, at 3,021,482 to 3,022,603 _RS14930 Position (kb) 3020 3021 3022Strain fitness (log2 ratio) -2 -1 0 1at 3019.730 kb on - strandat 3019.849 kb on + strandat 3019.850 kb on - strandat 3019.850 kb on - strandat 3019.866 kb on + strandat 3019.867 kb on - strandat 3019.867 kb on - strandat 3019.867 kb on - strandat 3019.893 kb on + strandat 3019.893 kb on + strandat 3019.924 kb on + strand, within A4249_RS14920at 3019.937 kb on - strand, within A4249_RS14920at 3020.245 kb on + strand, within A4249_RS14920at 3020.245 kb on + strand, within A4249_RS14920at 3020.245 kb on + strand, within A4249_RS14920at 3020.245 kb on + strand, within A4249_RS14920at 3020.245 kb on + strand, within A4249_RS14920at 3020.245 kb on + strand, within A4249_RS14920at 3020.245 kb on + strand, within A4249_RS14920at 3020.246 kb on - strand, within A4249_RS14920at 3020.246 kb on - strand, within A4249_RS14920at 3020.246 kb on - strand, within A4249_RS14920at 3020.246 kb on - strand, within A4249_RS14920at 3020.253 kb on + strand, within A4249_RS14920at 3020.253 kb on + strand, within A4249_RS14920at 3020.253 kb on + strand, within A4249_RS14920at 3020.253 kb on + strand, within A4249_RS14920at 3020.254 kb on - strand, within A4249_RS14920at 3020.254 kb on - strand, within A4249_RS14920at 3020.254 kb on - strand, within A4249_RS14920at 3020.254 kb on - strand, within A4249_RS14920at 3020.287 kb on + strandat 3020.287 kb on + strandat 3020.287 kb on + strandat 3020.287 kb on + strandat 3020.288 kb on - strandat 3020.288 kb on - strandat 3020.302 kb on + strandat 3020.302 kb on + strandat 3020.302 kb on + strandat 3020.302 kb on + strandat 3020.302 kb on + strandat 3020.302 kb on + strandat 3020.303 kb on - strandat 3020.303 kb on - strandat 3020.303 kb on - strandat 3020.303 kb on - strandat 3020.303 kb on - strandat 3020.334 kb on + strandat 3020.430 kb on + strandat 3020.430 kb on + strandat 3020.430 kb on + strandat 3020.431 kb on - strandat 3020.431 kb on - strandat 3020.431 kb on - strandat 3020.603 kb on - strand, within A4249_RS14925at 3020.603 kb on - strand, within A4249_RS14925at 3020.611 kb on - strand, within A4249_RS14925at 3020.701 kb on + strand, within A4249_RS14925at 3020.702 kb on - strand, within A4249_RS14925at 3020.702 kb on - strand, within A4249_RS14925at 3020.702 kb on - strand, within A4249_RS14925at 3020.702 kb on - strand, within A4249_RS14925at 3020.746 kb on + strand, within A4249_RS14925at 3020.746 kb on + strand, within A4249_RS14925at 3020.746 kb on + strand, within A4249_RS14925at 3020.746 kb on + strand, within A4249_RS14925at 3020.746 kb on + strand, within A4249_RS14925at 3020.747 kb on - strand, within A4249_RS14925at 3020.747 kb on - strand, within A4249_RS14925at 3020.747 kb on - strand, within A4249_RS14925at 3020.747 kb on - strand, within A4249_RS14925at 3020.747 kb on - strand, within A4249_RS14925at 3020.747 kb on - strand, within A4249_RS14925at 3020.747 kb on - strand, within A4249_RS14925at 3020.747 kb on - strand, within A4249_RS14925at 3020.761 kb on + strand, within A4249_RS14925at 3020.761 kb on + strand, within A4249_RS14925at 3020.762 kb on - strand, within A4249_RS14925at 3020.762 kb on - strand, within A4249_RS14925at 3020.762 kb on - strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.770 kb on + strand, within A4249_RS14925at 3020.771 kb on - strand, within A4249_RS14925at 3020.771 kb on - strand, within A4249_RS14925at 3020.771 kb on - strand, within A4249_RS14925at 3020.771 kb on - strand, within A4249_RS14925at 3020.771 kb on - strand, within A4249_RS14925at 3020.771 kb on - strand, within A4249_RS14925at 3020.771 kb on - strand, within A4249_RS14925at 3020.771 kb on - strand, within A4249_RS14925at 3020.771 kb on - strand, within A4249_RS14925at 3020.771 kb on - strand, within A4249_RS14925at 3020.771 kb on - strand, within A4249_RS14925at 3020.771 kb on - strand, within A4249_RS14925at 3020.771 kb on - strand, within A4249_RS14925at 3020.771 kb on - strand, within A4249_RS14925at 3020.771 kb on - strand, within A4249_RS14925at 3020.771 kb on - strand, within A4249_RS14925at 3020.771 kb on - strand, within A4249_RS14925at 3020.771 kb on - strand, within A4249_RS14925at 3020.773 kb on - strand, within A4249_RS14925at 3020.773 kb on - strand, within A4249_RS14925at 3020.877 kb on + strand, within A4249_RS14925at 3020.877 kb on + strand, within A4249_RS14925at 3020.877 kb on + strand, within A4249_RS14925at 3020.877 kb on + strand, within A4249_RS14925at 3020.877 kb on + strand, within A4249_RS14925at 3020.877 kb on + strand, within A4249_RS14925at 3020.877 kb on + strand, within A4249_RS14925at 3020.878 kb on - strand, within A4249_RS14925at 3020.878 kb on - strand, within A4249_RS14925at 3020.878 kb on - strand, within A4249_RS14925at 3020.878 kb on - strand, within A4249_RS14925at 3020.878 kb on - strand, within A4249_RS14925at 3020.878 kb on - strand, within A4249_RS14925at 3020.878 kb on - strand, within A4249_RS14925at 3020.878 kb on - strand, within A4249_RS14925at 3020.932 kb on + strand, within A4249_RS14925at 3020.932 kb on + strand, within A4249_RS14925at 3020.933 kb on - strand, within A4249_RS14925at 3021.034 kb on + strand, within A4249_RS14925at 3021.035 kb on - strand, within A4249_RS14925at 3021.035 kb on - strand, within A4249_RS14925at 3021.035 kb on - strand, within A4249_RS14925at 3021.035 kb on - strand, within A4249_RS14925at 3021.035 kb on - strand, within A4249_RS14925at 3021.199 kb on + strand, within A4249_RS14925at 3021.199 kb on + strand, within A4249_RS14925at 3021.200 kb on - strand, within A4249_RS14925at 3021.355 kb on + strandat 3021.590 kb on + strandat 3021.591 kb on - strandat 3021.591 kb on - strandat 3021.591 kb on - strandat 3022.274 kb on + strand, within A4249_RS14930at 3022.275 kb on - strand, within A4249_RS14930at 3022.275 kb on - strand, within A4249_RS14930

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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3,019,730 - +0.9
3,019,849 + -0.4
3,019,850 - -0.3
3,019,850 - -0.5
3,019,866 + +0.3
3,019,867 - -0.2
3,019,867 - +0.1
3,019,867 - -1.5
3,019,893 + +0.7
3,019,893 + +0.3
3,019,924 + A4249_RS14920 0.15 +1.2
3,019,937 - A4249_RS14920 0.18 +0.6
3,020,245 + A4249_RS14920 0.87 +0.1
3,020,245 + A4249_RS14920 0.87 -0.7
3,020,245 + A4249_RS14920 0.87 -0.1
3,020,245 + A4249_RS14920 0.87 -0.6
3,020,245 + A4249_RS14920 0.87 +0.5
3,020,245 + A4249_RS14920 0.87 -1.1
3,020,245 + A4249_RS14920 0.87 +0.5
3,020,246 - A4249_RS14920 0.87 -0.1
3,020,246 - A4249_RS14920 0.87 -0.5
3,020,246 - A4249_RS14920 0.87 -0.4
3,020,246 - A4249_RS14920 0.87 +0.7
3,020,253 + A4249_RS14920 0.88 +0.6
3,020,253 + A4249_RS14920 0.88 -0.8
3,020,253 + A4249_RS14920 0.88 -0.1
3,020,253 + A4249_RS14920 0.88 +0.5
3,020,254 - A4249_RS14920 0.89 +1.5
3,020,254 - A4249_RS14920 0.89 -0.2
3,020,254 - A4249_RS14920 0.89 +0.1
3,020,254 - A4249_RS14920 0.89 +0.6
3,020,287 + +0.4
3,020,287 + -0.2
3,020,287 + -0.0
3,020,287 + -0.2
3,020,288 - +0.4
3,020,288 - -0.6
3,020,302 + -0.0
3,020,302 + -0.1
3,020,302 + -0.3
3,020,302 + -0.1
3,020,302 + +0.4
3,020,302 + +0.2
3,020,303 - -0.6
3,020,303 - -0.1
3,020,303 - +0.3
3,020,303 - +1.3
3,020,303 - -1.1
3,020,334 + -0.2
3,020,430 + +0.3
3,020,430 + +0.0
3,020,430 + -0.4
3,020,431 - -0.5
3,020,431 - +0.9
3,020,431 - -1.0
3,020,603 - A4249_RS14925 0.22 -0.5
3,020,603 - A4249_RS14925 0.22 -0.2
3,020,611 - A4249_RS14925 0.23 -0.2
3,020,701 + A4249_RS14925 0.31 +0.3
3,020,702 - A4249_RS14925 0.32 -0.3
3,020,702 - A4249_RS14925 0.32 -0.9
3,020,702 - A4249_RS14925 0.32 +0.9
3,020,702 - A4249_RS14925 0.32 +0.2
3,020,746 + A4249_RS14925 0.36 +0.0
3,020,746 + A4249_RS14925 0.36 -0.5
3,020,746 + A4249_RS14925 0.36 -0.0
3,020,746 + A4249_RS14925 0.36 -0.2
3,020,746 + A4249_RS14925 0.36 -1.5
3,020,747 - A4249_RS14925 0.36 -0.1
3,020,747 - A4249_RS14925 0.36 -1.5
3,020,747 - A4249_RS14925 0.36 -0.8
3,020,747 - A4249_RS14925 0.36 +0.4
3,020,747 - A4249_RS14925 0.36 -0.1
3,020,747 - A4249_RS14925 0.36 +1.6
3,020,747 - A4249_RS14925 0.36 +0.5
3,020,747 - A4249_RS14925 0.36 +0.4
3,020,761 + A4249_RS14925 0.37 -0.4
3,020,761 + A4249_RS14925 0.37 +1.4
3,020,762 - A4249_RS14925 0.37 +0.7
3,020,762 - A4249_RS14925 0.37 +1.0
3,020,762 - A4249_RS14925 0.37 -0.1
3,020,770 + A4249_RS14925 0.38 -0.6
3,020,770 + A4249_RS14925 0.38 -2.0
3,020,770 + A4249_RS14925 0.38 -0.2
3,020,770 + A4249_RS14925 0.38 -0.9
3,020,770 + A4249_RS14925 0.38 -0.4
3,020,770 + A4249_RS14925 0.38 +0.1
3,020,770 + A4249_RS14925 0.38 +0.5
3,020,770 + A4249_RS14925 0.38 -0.7
3,020,770 + A4249_RS14925 0.38 +0.9
3,020,770 + A4249_RS14925 0.38 +0.4
3,020,770 + A4249_RS14925 0.38 +0.3
3,020,770 + A4249_RS14925 0.38 +0.1
3,020,770 + A4249_RS14925 0.38 +1.3
3,020,770 + A4249_RS14925 0.38 -0.9
3,020,770 + A4249_RS14925 0.38 +0.5
3,020,770 + A4249_RS14925 0.38 +0.1
3,020,770 + A4249_RS14925 0.38 +0.3
3,020,770 + A4249_RS14925 0.38 -0.3
3,020,770 + A4249_RS14925 0.38 -0.6
3,020,770 + A4249_RS14925 0.38 -1.3
3,020,770 + A4249_RS14925 0.38 +0.2
3,020,771 - A4249_RS14925 0.38 -0.5
3,020,771 - A4249_RS14925 0.38 +0.3
3,020,771 - A4249_RS14925 0.38 +0.0
3,020,771 - A4249_RS14925 0.38 -0.1
3,020,771 - A4249_RS14925 0.38 +1.0
3,020,771 - A4249_RS14925 0.38 +1.7
3,020,771 - A4249_RS14925 0.38 -0.9
3,020,771 - A4249_RS14925 0.38 +0.1
3,020,771 - A4249_RS14925 0.38 -0.3
3,020,771 - A4249_RS14925 0.38 +0.1
3,020,771 - A4249_RS14925 0.38 -1.5
3,020,771 - A4249_RS14925 0.38 -0.4
3,020,771 - A4249_RS14925 0.38 -0.3
3,020,771 - A4249_RS14925 0.38 -0.3
3,020,771 - A4249_RS14925 0.38 +0.1
3,020,771 - A4249_RS14925 0.38 -0.3
3,020,771 - A4249_RS14925 0.38 -0.9
3,020,771 - A4249_RS14925 0.38 +1.1
3,020,773 - A4249_RS14925 0.38 +0.1
3,020,773 - A4249_RS14925 0.38 +0.3
3,020,877 + A4249_RS14925 0.48 -2.0
3,020,877 + A4249_RS14925 0.48 -0.8
3,020,877 + A4249_RS14925 0.48 +0.2
3,020,877 + A4249_RS14925 0.48 -0.7
3,020,877 + A4249_RS14925 0.48 -0.7
3,020,877 + A4249_RS14925 0.48 -0.1
3,020,877 + A4249_RS14925 0.48 -0.4
3,020,878 - A4249_RS14925 0.48 -0.4
3,020,878 - A4249_RS14925 0.48 -1.7
3,020,878 - A4249_RS14925 0.48 -0.7
3,020,878 - A4249_RS14925 0.48 -1.1
3,020,878 - A4249_RS14925 0.48 +0.1
3,020,878 - A4249_RS14925 0.48 +0.4
3,020,878 - A4249_RS14925 0.48 -0.1
3,020,878 - A4249_RS14925 0.48 +0.4
3,020,932 + A4249_RS14925 0.53 +0.9
3,020,932 + A4249_RS14925 0.53 -0.2
3,020,933 - A4249_RS14925 0.54 -0.1
3,021,034 + A4249_RS14925 0.63 -0.3
3,021,035 - A4249_RS14925 0.63 -0.2
3,021,035 - A4249_RS14925 0.63 -0.4
3,021,035 - A4249_RS14925 0.63 -1.2
3,021,035 - A4249_RS14925 0.63 +0.3
3,021,035 - A4249_RS14925 0.63 -0.3
3,021,199 + A4249_RS14925 0.79 -0.6
3,021,199 + A4249_RS14925 0.79 +0.8
3,021,200 - A4249_RS14925 0.79 +0.1
3,021,355 + -0.4
3,021,590 + -0.6
3,021,591 - +0.1
3,021,591 - +1.0
3,021,591 - -0.0
3,022,274 + A4249_RS14930 0.71 +1.7
3,022,275 - A4249_RS14930 0.71 +0.1
3,022,275 - A4249_RS14930 0.71 +0.1

Or see this region's nucleotide sequence