Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS14900 and A4249_RS14905 overlap by 4 nucleotides A4249_RS14905 and A4249_RS14910 are separated by 106 nucleotides A4249_RS14910 and A4249_RS14915 are separated by 229 nucleotides
A4249_RS14900: A4249_RS14900 - phosphate/phosphite/phosphonate ABC transporter substrate-binding protein, at 3,015,198 to 3,016,214
_RS14900
A4249_RS14905: A4249_RS14905 - phosphonate ABC transporter ATP-binding protein, at 3,016,211 to 3,017,020
_RS14905
A4249_RS14910: A4249_RS14910 - DUF2254 domain-containing protein, at 3,017,127 to 3,018,356
_RS14910
A4249_RS14915: A4249_RS14915 - type III PLP-dependent enzyme, at 3,018,586 to 3,019,851
_RS14915
Position (kb)
3017
3018
3019 Strain fitness (log2 ratio)
-2
-1
0
1 at 3016.179 kb on + strand at 3016.179 kb on + strand at 3016.254 kb on + strand at 3016.255 kb on - strand at 3016.255 kb on - strand at 3016.302 kb on + strand, within A4249_RS14905 at 3016.302 kb on + strand, within A4249_RS14905 at 3016.303 kb on - strand, within A4249_RS14905 at 3016.345 kb on - strand, within A4249_RS14905 at 3016.497 kb on - strand, within A4249_RS14905 at 3016.497 kb on - strand, within A4249_RS14905 at 3016.566 kb on + strand, within A4249_RS14905 at 3016.635 kb on - strand, within A4249_RS14905 at 3016.635 kb on - strand, within A4249_RS14905 at 3016.985 kb on + strand at 3016.986 kb on - strand at 3017.030 kb on - strand at 3017.030 kb on - strand at 3017.037 kb on + strand at 3017.038 kb on - strand at 3017.058 kb on + strand at 3017.058 kb on + strand at 3017.059 kb on - strand at 3017.059 kb on - strand at 3017.086 kb on + strand at 3017.087 kb on - strand at 3017.087 kb on - strand at 3017.087 kb on - strand at 3017.161 kb on + strand at 3017.162 kb on - strand at 3017.393 kb on + strand, within A4249_RS14910 at 3017.393 kb on + strand, within A4249_RS14910 at 3017.394 kb on - strand, within A4249_RS14910 at 3017.426 kb on - strand, within A4249_RS14910 at 3017.480 kb on + strand, within A4249_RS14910 at 3017.480 kb on + strand, within A4249_RS14910 at 3017.480 kb on + strand, within A4249_RS14910 at 3017.480 kb on + strand, within A4249_RS14910 at 3017.481 kb on - strand, within A4249_RS14910 at 3017.481 kb on - strand, within A4249_RS14910 at 3017.481 kb on - strand, within A4249_RS14910 at 3017.548 kb on + strand, within A4249_RS14910 at 3017.548 kb on + strand, within A4249_RS14910 at 3017.548 kb on + strand, within A4249_RS14910 at 3017.548 kb on + strand, within A4249_RS14910 at 3017.549 kb on - strand, within A4249_RS14910 at 3017.549 kb on - strand, within A4249_RS14910 at 3017.549 kb on - strand, within A4249_RS14910 at 3017.549 kb on - strand, within A4249_RS14910 at 3017.549 kb on - strand, within A4249_RS14910 at 3017.549 kb on - strand, within A4249_RS14910 at 3017.549 kb on - strand, within A4249_RS14910 at 3017.549 kb on - strand, within A4249_RS14910 at 3017.549 kb on - strand, within A4249_RS14910 at 3017.549 kb on - strand, within A4249_RS14910 at 3017.549 kb on - strand, within A4249_RS14910 at 3017.549 kb on - strand, within A4249_RS14910 at 3017.980 kb on + strand, within A4249_RS14910 at 3017.980 kb on + strand, within A4249_RS14910 at 3017.980 kb on + strand, within A4249_RS14910 at 3017.980 kb on + strand, within A4249_RS14910 at 3017.980 kb on + strand, within A4249_RS14910 at 3017.981 kb on - strand, within A4249_RS14910 at 3017.981 kb on - strand, within A4249_RS14910 at 3017.981 kb on - strand, within A4249_RS14910 at 3017.983 kb on + strand, within A4249_RS14910 at 3017.983 kb on + strand, within A4249_RS14910 at 3017.983 kb on + strand, within A4249_RS14910 at 3017.983 kb on + strand, within A4249_RS14910 at 3017.983 kb on + strand, within A4249_RS14910 at 3017.983 kb on + strand, within A4249_RS14910 at 3017.983 kb on + strand, within A4249_RS14910 at 3017.984 kb on - strand, within A4249_RS14910 at 3017.984 kb on - strand, within A4249_RS14910 at 3017.984 kb on - strand, within A4249_RS14910 at 3017.984 kb on - strand, within A4249_RS14910 at 3017.984 kb on - strand, within A4249_RS14910 at 3018.019 kb on + strand, within A4249_RS14910 at 3018.020 kb on - strand, within A4249_RS14910 at 3018.119 kb on + strand, within A4249_RS14910 at 3018.119 kb on + strand, within A4249_RS14910 at 3018.119 kb on + strand, within A4249_RS14910 at 3018.119 kb on + strand, within A4249_RS14910 at 3018.119 kb on + strand, within A4249_RS14910 at 3018.119 kb on + strand, within A4249_RS14910 at 3018.119 kb on + strand, within A4249_RS14910 at 3018.119 kb on + strand, within A4249_RS14910 at 3018.119 kb on + strand, within A4249_RS14910 at 3018.119 kb on + strand, within A4249_RS14910 at 3018.119 kb on + strand, within A4249_RS14910 at 3018.120 kb on - strand, within A4249_RS14910 at 3018.120 kb on - strand, within A4249_RS14910 at 3018.120 kb on - strand, within A4249_RS14910 at 3018.120 kb on - strand, within A4249_RS14910 at 3018.120 kb on - strand, within A4249_RS14910 at 3018.120 kb on - strand, within A4249_RS14910 at 3018.120 kb on - strand, within A4249_RS14910 at 3018.120 kb on - strand, within A4249_RS14910 at 3018.121 kb on + strand, within A4249_RS14910 at 3018.121 kb on + strand, within A4249_RS14910 at 3018.121 kb on + strand, within A4249_RS14910 at 3018.293 kb on - strand at 3018.451 kb on + strand at 3018.451 kb on + strand at 3018.451 kb on + strand at 3018.452 kb on - strand at 3018.477 kb on + strand at 3018.477 kb on + strand at 3018.477 kb on + strand at 3018.477 kb on + strand at 3018.524 kb on + strand at 3018.524 kb on + strand at 3018.524 kb on + strand at 3018.567 kb on + strand at 3018.567 kb on + strand at 3018.567 kb on + strand at 3018.578 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 3,016,179 + +0.6 3,016,179 + +0.1 3,016,254 + +0.3 3,016,255 - -0.3 3,016,255 - +0.2 3,016,302 + A4249_RS14905 0.11 +0.8 3,016,302 + A4249_RS14905 0.11 +0.5 3,016,303 - A4249_RS14905 0.11 +1.4 3,016,345 - A4249_RS14905 0.17 -0.6 3,016,497 - A4249_RS14905 0.35 -0.5 3,016,497 - A4249_RS14905 0.35 +1.3 3,016,566 + A4249_RS14905 0.44 -0.5 3,016,635 - A4249_RS14905 0.52 +0.5 3,016,635 - A4249_RS14905 0.52 -0.3 3,016,985 + +0.2 3,016,986 - -0.7 3,017,030 - +0.7 3,017,030 - -0.9 3,017,037 + +0.9 3,017,038 - +0.4 3,017,058 + +1.4 3,017,058 + -0.2 3,017,059 - -0.1 3,017,059 - -0.7 3,017,086 + +0.8 3,017,087 - +0.5 3,017,087 - -0.4 3,017,087 - +0.1 3,017,161 + -0.6 3,017,162 - -0.1 3,017,393 + A4249_RS14910 0.22 -0.5 3,017,393 + A4249_RS14910 0.22 +0.1 3,017,394 - A4249_RS14910 0.22 +0.1 3,017,426 - A4249_RS14910 0.24 -0.5 3,017,480 + A4249_RS14910 0.29 -0.4 3,017,480 + A4249_RS14910 0.29 +0.3 3,017,480 + A4249_RS14910 0.29 +0.3 3,017,480 + A4249_RS14910 0.29 -0.5 3,017,481 - A4249_RS14910 0.29 -0.5 3,017,481 - A4249_RS14910 0.29 -0.4 3,017,481 - A4249_RS14910 0.29 +1.0 3,017,548 + A4249_RS14910 0.34 -0.1 3,017,548 + A4249_RS14910 0.34 +0.5 3,017,548 + A4249_RS14910 0.34 -1.8 3,017,548 + A4249_RS14910 0.34 -1.2 3,017,549 - A4249_RS14910 0.34 +0.4 3,017,549 - A4249_RS14910 0.34 +0.0 3,017,549 - A4249_RS14910 0.34 -0.1 3,017,549 - A4249_RS14910 0.34 -0.5 3,017,549 - A4249_RS14910 0.34 +0.4 3,017,549 - A4249_RS14910 0.34 +1.4 3,017,549 - A4249_RS14910 0.34 -0.3 3,017,549 - A4249_RS14910 0.34 -0.5 3,017,549 - A4249_RS14910 0.34 -0.8 3,017,549 - A4249_RS14910 0.34 -0.7 3,017,549 - A4249_RS14910 0.34 -0.5 3,017,549 - A4249_RS14910 0.34 +0.7 3,017,980 + A4249_RS14910 0.69 -1.0 3,017,980 + A4249_RS14910 0.69 -0.2 3,017,980 + A4249_RS14910 0.69 -0.1 3,017,980 + A4249_RS14910 0.69 -0.7 3,017,980 + A4249_RS14910 0.69 +0.7 3,017,981 - A4249_RS14910 0.69 +0.4 3,017,981 - A4249_RS14910 0.69 +1.1 3,017,981 - A4249_RS14910 0.69 -0.6 3,017,983 + A4249_RS14910 0.70 +0.3 3,017,983 + A4249_RS14910 0.70 -1.7 3,017,983 + A4249_RS14910 0.70 -0.8 3,017,983 + A4249_RS14910 0.70 -0.4 3,017,983 + A4249_RS14910 0.70 -0.4 3,017,983 + A4249_RS14910 0.70 -0.3 3,017,983 + A4249_RS14910 0.70 -0.7 3,017,984 - A4249_RS14910 0.70 -0.1 3,017,984 - A4249_RS14910 0.70 -0.4 3,017,984 - A4249_RS14910 0.70 +0.7 3,017,984 - A4249_RS14910 0.70 +0.5 3,017,984 - A4249_RS14910 0.70 -0.5 3,018,019 + A4249_RS14910 0.73 -0.0 3,018,020 - A4249_RS14910 0.73 -0.6 3,018,119 + A4249_RS14910 0.81 -0.3 3,018,119 + A4249_RS14910 0.81 +0.4 3,018,119 + A4249_RS14910 0.81 -0.4 3,018,119 + A4249_RS14910 0.81 -0.1 3,018,119 + A4249_RS14910 0.81 +0.5 3,018,119 + A4249_RS14910 0.81 +0.1 3,018,119 + A4249_RS14910 0.81 -0.2 3,018,119 + A4249_RS14910 0.81 +0.4 3,018,119 + A4249_RS14910 0.81 -0.2 3,018,119 + A4249_RS14910 0.81 -0.6 3,018,119 + A4249_RS14910 0.81 -0.5 3,018,120 - A4249_RS14910 0.81 -0.9 3,018,120 - A4249_RS14910 0.81 +0.5 3,018,120 - A4249_RS14910 0.81 -0.0 3,018,120 - A4249_RS14910 0.81 +0.6 3,018,120 - A4249_RS14910 0.81 -0.5 3,018,120 - A4249_RS14910 0.81 -0.0 3,018,120 - A4249_RS14910 0.81 +0.5 3,018,120 - A4249_RS14910 0.81 -0.6 3,018,121 + A4249_RS14910 0.81 +0.8 3,018,121 + A4249_RS14910 0.81 +0.3 3,018,121 + A4249_RS14910 0.81 -0.2 3,018,293 - +0.5 3,018,451 + -1.1 3,018,451 + -1.0 3,018,451 + -0.3 3,018,452 - +1.7 3,018,477 + +0.3 3,018,477 + -0.7 3,018,477 + -0.9 3,018,477 + -0.3 3,018,524 + -0.3 3,018,524 + +0.1 3,018,524 + +0.4 3,018,567 + -1.0 3,018,567 + -0.2 3,018,567 + -0.5 3,018,578 + +0.3
Or see this region's nucleotide sequence