Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14690

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS14685 and A4249_RS14690 are separated by 37 nucleotidesA4249_RS14690 and A4249_RS14695 are separated by 64 nucleotidesA4249_RS14695 and A4249_RS14700 are separated by 3 nucleotidesA4249_RS14700 and A4249_RS14705 are separated by 16 nucleotides A4249_RS14685: A4249_RS14685 - M28 family metallopeptidase, at 2,974,805 to 2,976,451 _RS14685 A4249_RS14690: A4249_RS14690 - TIGR03862 family flavoprotein, at 2,976,489 to 2,977,718 _RS14690 A4249_RS14695: A4249_RS14695 - transcription elongation factor GreA, at 2,977,783 to 2,978,262 _RS14695 A4249_RS14700: A4249_RS14700 - helix-turn-helix transcriptional regulator, at 2,978,266 to 2,978,673 _RS14700 A4249_RS14705: A4249_RS14705 - apolipoprotein N-acyltransferase, at 2,978,690 to 2,980,327 _RS14705 Position (kb) 2976 2977 2978Strain fitness (log2 ratio) -3 -2 -1 0 1at 2975.493 kb on + strand, within A4249_RS14685at 2975.493 kb on + strand, within A4249_RS14685at 2975.493 kb on + strand, within A4249_RS14685at 2975.493 kb on + strand, within A4249_RS14685at 2975.493 kb on + strand, within A4249_RS14685at 2975.493 kb on + strand, within A4249_RS14685at 2975.493 kb on + strand, within A4249_RS14685at 2975.493 kb on + strand, within A4249_RS14685at 2975.493 kb on + strand, within A4249_RS14685at 2975.494 kb on - strand, within A4249_RS14685at 2975.494 kb on - strand, within A4249_RS14685at 2975.494 kb on - strand, within A4249_RS14685at 2975.494 kb on - strand, within A4249_RS14685at 2975.494 kb on - strand, within A4249_RS14685at 2975.494 kb on - strand, within A4249_RS14685at 2975.494 kb on - strand, within A4249_RS14685at 2975.494 kb on - strand, within A4249_RS14685at 2975.494 kb on - strand, within A4249_RS14685at 2975.494 kb on - strand, within A4249_RS14685at 2975.494 kb on - strand, within A4249_RS14685at 2975.494 kb on - strand, within A4249_RS14685at 2975.784 kb on - strand, within A4249_RS14685at 2975.784 kb on - strand, within A4249_RS14685at 2975.784 kb on - strand, within A4249_RS14685at 2975.799 kb on + strand, within A4249_RS14685at 2975.799 kb on + strand, within A4249_RS14685at 2975.799 kb on + strand, within A4249_RS14685at 2975.871 kb on + strand, within A4249_RS14685at 2975.871 kb on + strand, within A4249_RS14685at 2975.871 kb on + strand, within A4249_RS14685at 2975.871 kb on + strand, within A4249_RS14685at 2975.871 kb on + strand, within A4249_RS14685at 2975.872 kb on - strand, within A4249_RS14685at 2975.872 kb on - strand, within A4249_RS14685at 2975.872 kb on - strand, within A4249_RS14685at 2975.872 kb on - strand, within A4249_RS14685at 2975.886 kb on + strand, within A4249_RS14685at 2975.886 kb on + strand, within A4249_RS14685at 2975.886 kb on + strand, within A4249_RS14685at 2975.887 kb on - strand, within A4249_RS14685at 2975.887 kb on - strand, within A4249_RS14685at 2976.273 kb on - strand, within A4249_RS14685at 2976.456 kb on + strandat 2976.457 kb on - strandat 2976.457 kb on - strandat 2976.566 kb on - strandat 2976.566 kb on - strandat 2976.703 kb on - strand, within A4249_RS14690at 2976.781 kb on + strand, within A4249_RS14690at 2976.781 kb on + strand, within A4249_RS14690at 2976.781 kb on + strand, within A4249_RS14690at 2976.782 kb on - strand, within A4249_RS14690at 2976.970 kb on + strand, within A4249_RS14690at 2976.970 kb on + strand, within A4249_RS14690at 2976.970 kb on + strand, within A4249_RS14690at 2976.970 kb on + strand, within A4249_RS14690at 2976.970 kb on + strand, within A4249_RS14690at 2976.970 kb on + strand, within A4249_RS14690at 2976.970 kb on + strand, within A4249_RS14690at 2976.970 kb on + strand, within A4249_RS14690at 2976.970 kb on + strand, within A4249_RS14690at 2976.970 kb on + strand, within A4249_RS14690at 2976.970 kb on + strand, within A4249_RS14690at 2976.970 kb on + strand, within A4249_RS14690at 2976.971 kb on - strand, within A4249_RS14690at 2976.971 kb on - strand, within A4249_RS14690at 2976.971 kb on - strand, within A4249_RS14690at 2976.971 kb on - strand, within A4249_RS14690at 2976.971 kb on - strand, within A4249_RS14690at 2976.971 kb on - strand, within A4249_RS14690at 2976.971 kb on - strand, within A4249_RS14690at 2976.971 kb on - strand, within A4249_RS14690at 2976.989 kb on + strand, within A4249_RS14690at 2977.505 kb on - strand, within A4249_RS14690at 2977.505 kb on - strand, within A4249_RS14690at 2977.697 kb on + strandat 2977.698 kb on - strandat 2977.698 kb on - strandat 2977.698 kb on - strandat 2977.698 kb on - strandat 2977.752 kb on + strandat 2977.752 kb on + strandat 2977.753 kb on - strandat 2977.754 kb on + strandat 2977.754 kb on + strandat 2977.754 kb on + strandat 2977.755 kb on - strandat 2977.755 kb on - strandat 2977.770 kb on + strandat 2977.770 kb on + strandat 2977.770 kb on + strandat 2977.770 kb on + strandat 2977.770 kb on + strandat 2977.771 kb on - strandat 2977.771 kb on - strandat 2977.771 kb on - strandat 2977.927 kb on + strand, within A4249_RS14695at 2977.928 kb on - strand, within A4249_RS14695at 2977.930 kb on - strand, within A4249_RS14695at 2977.930 kb on - strand, within A4249_RS14695at 2978.295 kb on + strandat 2978.295 kb on - strandat 2978.296 kb on - strandat 2978.296 kb on - strandat 2978.441 kb on + strand, within A4249_RS14700at 2978.442 kb on - strand, within A4249_RS14700at 2978.442 kb on - strand, within A4249_RS14700at 2978.692 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,975,493 + A4249_RS14685 0.42 -0.8
2,975,493 + A4249_RS14685 0.42 -0.2
2,975,493 + A4249_RS14685 0.42 +0.4
2,975,493 + A4249_RS14685 0.42 -1.5
2,975,493 + A4249_RS14685 0.42 -0.4
2,975,493 + A4249_RS14685 0.42 +0.3
2,975,493 + A4249_RS14685 0.42 -1.2
2,975,493 + A4249_RS14685 0.42 -0.5
2,975,493 + A4249_RS14685 0.42 +0.8
2,975,494 - A4249_RS14685 0.42 +0.6
2,975,494 - A4249_RS14685 0.42 +0.7
2,975,494 - A4249_RS14685 0.42 +0.3
2,975,494 - A4249_RS14685 0.42 -0.0
2,975,494 - A4249_RS14685 0.42 +0.4
2,975,494 - A4249_RS14685 0.42 +0.1
2,975,494 - A4249_RS14685 0.42 +0.2
2,975,494 - A4249_RS14685 0.42 -0.0
2,975,494 - A4249_RS14685 0.42 +0.1
2,975,494 - A4249_RS14685 0.42 +0.2
2,975,494 - A4249_RS14685 0.42 -0.7
2,975,494 - A4249_RS14685 0.42 +1.1
2,975,784 - A4249_RS14685 0.59 -0.3
2,975,784 - A4249_RS14685 0.59 -0.4
2,975,784 - A4249_RS14685 0.59 -0.3
2,975,799 + A4249_RS14685 0.60 +1.1
2,975,799 + A4249_RS14685 0.60 +0.6
2,975,799 + A4249_RS14685 0.60 -0.7
2,975,871 + A4249_RS14685 0.65 -0.1
2,975,871 + A4249_RS14685 0.65 -0.0
2,975,871 + A4249_RS14685 0.65 +0.4
2,975,871 + A4249_RS14685 0.65 -0.5
2,975,871 + A4249_RS14685 0.65 -0.6
2,975,872 - A4249_RS14685 0.65 -0.5
2,975,872 - A4249_RS14685 0.65 +0.1
2,975,872 - A4249_RS14685 0.65 +0.2
2,975,872 - A4249_RS14685 0.65 -0.2
2,975,886 + A4249_RS14685 0.66 +0.1
2,975,886 + A4249_RS14685 0.66 +1.1
2,975,886 + A4249_RS14685 0.66 -2.6
2,975,887 - A4249_RS14685 0.66 +0.1
2,975,887 - A4249_RS14685 0.66 -0.1
2,976,273 - A4249_RS14685 0.89 +0.7
2,976,456 + -0.3
2,976,457 - -0.6
2,976,457 - +0.3
2,976,566 - -0.1
2,976,566 - -0.2
2,976,703 - A4249_RS14690 0.17 -0.6
2,976,781 + A4249_RS14690 0.24 +0.8
2,976,781 + A4249_RS14690 0.24 +0.8
2,976,781 + A4249_RS14690 0.24 +0.1
2,976,782 - A4249_RS14690 0.24 -0.0
2,976,970 + A4249_RS14690 0.39 +0.4
2,976,970 + A4249_RS14690 0.39 -0.3
2,976,970 + A4249_RS14690 0.39 -1.5
2,976,970 + A4249_RS14690 0.39 -0.1
2,976,970 + A4249_RS14690 0.39 +0.0
2,976,970 + A4249_RS14690 0.39 +0.1
2,976,970 + A4249_RS14690 0.39 +1.3
2,976,970 + A4249_RS14690 0.39 -0.2
2,976,970 + A4249_RS14690 0.39 +0.4
2,976,970 + A4249_RS14690 0.39 +0.2
2,976,970 + A4249_RS14690 0.39 -0.4
2,976,970 + A4249_RS14690 0.39 +0.2
2,976,971 - A4249_RS14690 0.39 -0.3
2,976,971 - A4249_RS14690 0.39 -0.1
2,976,971 - A4249_RS14690 0.39 -0.9
2,976,971 - A4249_RS14690 0.39 +0.7
2,976,971 - A4249_RS14690 0.39 -1.5
2,976,971 - A4249_RS14690 0.39 -0.6
2,976,971 - A4249_RS14690 0.39 +0.4
2,976,971 - A4249_RS14690 0.39 -0.5
2,976,989 + A4249_RS14690 0.41 -1.1
2,977,505 - A4249_RS14690 0.83 -0.4
2,977,505 - A4249_RS14690 0.83 +0.2
2,977,697 + -0.6
2,977,698 - +0.5
2,977,698 - -0.8
2,977,698 - +0.2
2,977,698 - +0.7
2,977,752 + -0.8
2,977,752 + -1.4
2,977,753 - -0.8
2,977,754 + -1.8
2,977,754 + +0.3
2,977,754 + +0.6
2,977,755 - +1.3
2,977,755 - -0.2
2,977,770 + -0.3
2,977,770 + -0.4
2,977,770 + -0.1
2,977,770 + +0.4
2,977,770 + +0.1
2,977,771 - -0.4
2,977,771 - +0.6
2,977,771 - -0.6
2,977,927 + A4249_RS14695 0.30 +0.1
2,977,928 - A4249_RS14695 0.30 -3.3
2,977,930 - A4249_RS14695 0.31 -1.2
2,977,930 - A4249_RS14695 0.31 +0.1
2,978,295 + +0.7
2,978,295 - -0.0
2,978,296 - +0.2
2,978,296 - +1.3
2,978,441 + A4249_RS14700 0.43 +0.3
2,978,442 - A4249_RS14700 0.43 -1.9
2,978,442 - A4249_RS14700 0.43 -0.1
2,978,692 - +0.4

Or see this region's nucleotide sequence