Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14685

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS14680 and A4249_RS14685 overlap by 4 nucleotidesA4249_RS14685 and A4249_RS14690 are separated by 37 nucleotides A4249_RS14680: A4249_RS14680 - PAS domain-containing sensor histidine kinase, at 2,972,487 to 2,974,808 _RS14680 A4249_RS14685: A4249_RS14685 - M28 family metallopeptidase, at 2,974,805 to 2,976,451 _RS14685 A4249_RS14690: A4249_RS14690 - TIGR03862 family flavoprotein, at 2,976,489 to 2,977,718 _RS14690 Position (kb) 2974 2975 2976 2977Strain fitness (log2 ratio) -2 -1 0 1 2at 2974.140 kb on + strand, within A4249_RS14680at 2974.140 kb on + strand, within A4249_RS14680at 2974.141 kb on - strand, within A4249_RS14680at 2974.141 kb on - strand, within A4249_RS14680at 2974.141 kb on - strand, within A4249_RS14680at 2974.596 kb on + strandat 2974.596 kb on + strandat 2974.597 kb on - strandat 2974.597 kb on - strandat 2974.597 kb on - strandat 2974.603 kb on + strandat 2974.603 kb on + strandat 2974.603 kb on + strandat 2974.806 kb on + strandat 2974.807 kb on - strandat 2974.908 kb on + strandat 2974.908 kb on + strandat 2974.908 kb on + strandat 2974.908 kb on + strandat 2974.909 kb on - strandat 2974.909 kb on - strandat 2974.995 kb on + strand, within A4249_RS14685at 2974.995 kb on + strand, within A4249_RS14685at 2974.995 kb on + strand, within A4249_RS14685at 2974.995 kb on + strand, within A4249_RS14685at 2974.995 kb on + strand, within A4249_RS14685at 2974.996 kb on - strand, within A4249_RS14685at 2975.088 kb on + strand, within A4249_RS14685at 2975.088 kb on + strand, within A4249_RS14685at 2975.088 kb on + strand, within A4249_RS14685at 2975.089 kb on - strand, within A4249_RS14685at 2975.089 kb on - strand, within A4249_RS14685at 2975.089 kb on - strand, within A4249_RS14685at 2975.089 kb on - strand, within A4249_RS14685at 2975.289 kb on + strand, within A4249_RS14685at 2975.289 kb on + strand, within A4249_RS14685at 2975.289 kb on + strand, within A4249_RS14685at 2975.290 kb on - strand, within A4249_RS14685at 2975.290 kb on - strand, within A4249_RS14685at 2975.292 kb on + strand, within A4249_RS14685at 2975.292 kb on + strand, within A4249_RS14685at 2975.292 kb on + strand, within A4249_RS14685at 2975.292 kb on + strand, within A4249_RS14685at 2975.292 kb on + strand, within A4249_RS14685at 2975.292 kb on + strand, within A4249_RS14685at 2975.292 kb on + strand, within A4249_RS14685at 2975.292 kb on + strand, within A4249_RS14685at 2975.292 kb on + strand, within A4249_RS14685at 2975.293 kb on - strand, within A4249_RS14685at 2975.293 kb on - strand, within A4249_RS14685at 2975.293 kb on - strand, within A4249_RS14685at 2975.293 kb on - strand, within A4249_RS14685at 2975.293 kb on - strand, within A4249_RS14685at 2975.293 kb on - strand, within A4249_RS14685at 2975.293 kb on - strand, within A4249_RS14685at 2975.293 kb on - strand, within A4249_RS14685at 2975.293 kb on - strand, within A4249_RS14685at 2975.293 kb on - strand, within A4249_RS14685at 2975.293 kb on - strand, within A4249_RS14685at 2975.293 kb on - strand, within A4249_RS14685at 2975.293 kb on - strand, within A4249_RS14685at 2975.431 kb on + strand, within A4249_RS14685at 2975.431 kb on + strand, within A4249_RS14685at 2975.432 kb on - strand, within A4249_RS14685at 2975.433 kb on + strand, within A4249_RS14685at 2975.433 kb on + strand, within A4249_RS14685at 2975.433 kb on + strand, within A4249_RS14685at 2975.433 kb on + strand, within A4249_RS14685at 2975.433 kb on + strand, within A4249_RS14685at 2975.433 kb on + strand, within A4249_RS14685at 2975.433 kb on + strand, within A4249_RS14685at 2975.433 kb on + strand, within A4249_RS14685at 2975.433 kb on + strand, within A4249_RS14685at 2975.433 kb on + strand, within A4249_RS14685at 2975.433 kb on + strand, within A4249_RS14685at 2975.434 kb on - strand, within A4249_RS14685at 2975.434 kb on - strand, within A4249_RS14685at 2975.434 kb on - strand, within A4249_RS14685at 2975.434 kb on - strand, within A4249_RS14685at 2975.434 kb on - strand, within A4249_RS14685at 2975.434 kb on - strand, within A4249_RS14685at 2975.434 kb on - strand, within A4249_RS14685at 2975.472 kb on + strand, within A4249_RS14685at 2975.493 kb on + strand, within A4249_RS14685at 2975.493 kb on + strand, within A4249_RS14685at 2975.493 kb on + strand, within A4249_RS14685at 2975.493 kb on + strand, within A4249_RS14685at 2975.493 kb on + strand, within A4249_RS14685at 2975.493 kb on + strand, within A4249_RS14685at 2975.493 kb on + strand, within A4249_RS14685at 2975.493 kb on + strand, within A4249_RS14685at 2975.493 kb on + strand, within A4249_RS14685at 2975.494 kb on - strand, within A4249_RS14685at 2975.494 kb on - strand, within A4249_RS14685at 2975.494 kb on - strand, within A4249_RS14685at 2975.494 kb on - strand, within A4249_RS14685at 2975.494 kb on - strand, within A4249_RS14685at 2975.494 kb on - strand, within A4249_RS14685at 2975.494 kb on - strand, within A4249_RS14685at 2975.494 kb on - strand, within A4249_RS14685at 2975.494 kb on - strand, within A4249_RS14685at 2975.494 kb on - strand, within A4249_RS14685at 2975.494 kb on - strand, within A4249_RS14685at 2975.494 kb on - strand, within A4249_RS14685at 2975.784 kb on - strand, within A4249_RS14685at 2975.784 kb on - strand, within A4249_RS14685at 2975.784 kb on - strand, within A4249_RS14685at 2975.799 kb on + strand, within A4249_RS14685at 2975.799 kb on + strand, within A4249_RS14685at 2975.799 kb on + strand, within A4249_RS14685at 2975.871 kb on + strand, within A4249_RS14685at 2975.871 kb on + strand, within A4249_RS14685at 2975.871 kb on + strand, within A4249_RS14685at 2975.871 kb on + strand, within A4249_RS14685at 2975.871 kb on + strand, within A4249_RS14685at 2975.872 kb on - strand, within A4249_RS14685at 2975.872 kb on - strand, within A4249_RS14685at 2975.872 kb on - strand, within A4249_RS14685at 2975.872 kb on - strand, within A4249_RS14685at 2975.886 kb on + strand, within A4249_RS14685at 2975.886 kb on + strand, within A4249_RS14685at 2975.886 kb on + strand, within A4249_RS14685at 2975.887 kb on - strand, within A4249_RS14685at 2975.887 kb on - strand, within A4249_RS14685at 2976.273 kb on - strand, within A4249_RS14685at 2976.456 kb on + strandat 2976.457 kb on - strandat 2976.457 kb on - strandat 2976.566 kb on - strandat 2976.566 kb on - strandat 2976.703 kb on - strand, within A4249_RS14690at 2976.781 kb on + strand, within A4249_RS14690at 2976.781 kb on + strand, within A4249_RS14690at 2976.781 kb on + strand, within A4249_RS14690at 2976.782 kb on - strand, within A4249_RS14690at 2976.970 kb on + strand, within A4249_RS14690at 2976.970 kb on + strand, within A4249_RS14690at 2976.970 kb on + strand, within A4249_RS14690at 2976.970 kb on + strand, within A4249_RS14690at 2976.970 kb on + strand, within A4249_RS14690at 2976.970 kb on + strand, within A4249_RS14690at 2976.970 kb on + strand, within A4249_RS14690at 2976.970 kb on + strand, within A4249_RS14690at 2976.970 kb on + strand, within A4249_RS14690at 2976.970 kb on + strand, within A4249_RS14690at 2976.970 kb on + strand, within A4249_RS14690at 2976.970 kb on + strand, within A4249_RS14690at 2976.971 kb on - strand, within A4249_RS14690at 2976.971 kb on - strand, within A4249_RS14690at 2976.971 kb on - strand, within A4249_RS14690at 2976.971 kb on - strand, within A4249_RS14690at 2976.971 kb on - strand, within A4249_RS14690at 2976.971 kb on - strand, within A4249_RS14690at 2976.971 kb on - strand, within A4249_RS14690at 2976.971 kb on - strand, within A4249_RS14690at 2976.989 kb on + strand, within A4249_RS14690

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,974,140 + A4249_RS14680 0.71 -0.2
2,974,140 + A4249_RS14680 0.71 -1.0
2,974,141 - A4249_RS14680 0.71 -0.1
2,974,141 - A4249_RS14680 0.71 -0.5
2,974,141 - A4249_RS14680 0.71 -0.0
2,974,596 + -0.7
2,974,596 + +0.6
2,974,597 - +1.8
2,974,597 - -0.4
2,974,597 - -0.6
2,974,603 + -0.1
2,974,603 + -0.0
2,974,603 + -1.7
2,974,806 + +0.6
2,974,807 - -0.8
2,974,908 + +0.8
2,974,908 + -0.6
2,974,908 + -0.0
2,974,908 + +0.1
2,974,909 - +0.4
2,974,909 - -0.0
2,974,995 + A4249_RS14685 0.12 -0.2
2,974,995 + A4249_RS14685 0.12 -0.1
2,974,995 + A4249_RS14685 0.12 -0.3
2,974,995 + A4249_RS14685 0.12 +0.3
2,974,995 + A4249_RS14685 0.12 -0.7
2,974,996 - A4249_RS14685 0.12 +2.1
2,975,088 + A4249_RS14685 0.17 -0.3
2,975,088 + A4249_RS14685 0.17 -0.2
2,975,088 + A4249_RS14685 0.17 +0.1
2,975,089 - A4249_RS14685 0.17 +0.3
2,975,089 - A4249_RS14685 0.17 +0.5
2,975,089 - A4249_RS14685 0.17 +0.0
2,975,089 - A4249_RS14685 0.17 +0.1
2,975,289 + A4249_RS14685 0.29 -1.3
2,975,289 + A4249_RS14685 0.29 -1.3
2,975,289 + A4249_RS14685 0.29 -2.0
2,975,290 - A4249_RS14685 0.29 -0.4
2,975,290 - A4249_RS14685 0.29 +0.4
2,975,292 + A4249_RS14685 0.30 +0.1
2,975,292 + A4249_RS14685 0.30 -0.3
2,975,292 + A4249_RS14685 0.30 +0.1
2,975,292 + A4249_RS14685 0.30 +0.4
2,975,292 + A4249_RS14685 0.30 -0.4
2,975,292 + A4249_RS14685 0.30 -0.1
2,975,292 + A4249_RS14685 0.30 -0.6
2,975,292 + A4249_RS14685 0.30 -1.1
2,975,292 + A4249_RS14685 0.30 -0.2
2,975,293 - A4249_RS14685 0.30 -0.4
2,975,293 - A4249_RS14685 0.30 -0.1
2,975,293 - A4249_RS14685 0.30 +0.5
2,975,293 - A4249_RS14685 0.30 -0.4
2,975,293 - A4249_RS14685 0.30 +0.2
2,975,293 - A4249_RS14685 0.30 -0.6
2,975,293 - A4249_RS14685 0.30 +0.8
2,975,293 - A4249_RS14685 0.30 -0.1
2,975,293 - A4249_RS14685 0.30 +0.3
2,975,293 - A4249_RS14685 0.30 -0.6
2,975,293 - A4249_RS14685 0.30 -0.2
2,975,293 - A4249_RS14685 0.30 -0.4
2,975,293 - A4249_RS14685 0.30 -1.3
2,975,431 + A4249_RS14685 0.38 +0.7
2,975,431 + A4249_RS14685 0.38 -0.2
2,975,432 - A4249_RS14685 0.38 +0.7
2,975,433 + A4249_RS14685 0.38 -0.6
2,975,433 + A4249_RS14685 0.38 +0.9
2,975,433 + A4249_RS14685 0.38 +0.9
2,975,433 + A4249_RS14685 0.38 +0.8
2,975,433 + A4249_RS14685 0.38 +0.3
2,975,433 + A4249_RS14685 0.38 +0.8
2,975,433 + A4249_RS14685 0.38 +0.4
2,975,433 + A4249_RS14685 0.38 -0.8
2,975,433 + A4249_RS14685 0.38 -0.7
2,975,433 + A4249_RS14685 0.38 -0.3
2,975,433 + A4249_RS14685 0.38 +0.5
2,975,434 - A4249_RS14685 0.38 -1.0
2,975,434 - A4249_RS14685 0.38 -0.6
2,975,434 - A4249_RS14685 0.38 -0.3
2,975,434 - A4249_RS14685 0.38 +0.1
2,975,434 - A4249_RS14685 0.38 +0.6
2,975,434 - A4249_RS14685 0.38 +1.0
2,975,434 - A4249_RS14685 0.38 +0.2
2,975,472 + A4249_RS14685 0.40 +0.2
2,975,493 + A4249_RS14685 0.42 -0.8
2,975,493 + A4249_RS14685 0.42 -0.2
2,975,493 + A4249_RS14685 0.42 +0.4
2,975,493 + A4249_RS14685 0.42 -1.5
2,975,493 + A4249_RS14685 0.42 -0.4
2,975,493 + A4249_RS14685 0.42 +0.3
2,975,493 + A4249_RS14685 0.42 -1.2
2,975,493 + A4249_RS14685 0.42 -0.5
2,975,493 + A4249_RS14685 0.42 +0.8
2,975,494 - A4249_RS14685 0.42 +0.6
2,975,494 - A4249_RS14685 0.42 +0.7
2,975,494 - A4249_RS14685 0.42 +0.3
2,975,494 - A4249_RS14685 0.42 -0.0
2,975,494 - A4249_RS14685 0.42 +0.4
2,975,494 - A4249_RS14685 0.42 +0.1
2,975,494 - A4249_RS14685 0.42 +0.2
2,975,494 - A4249_RS14685 0.42 -0.0
2,975,494 - A4249_RS14685 0.42 +0.1
2,975,494 - A4249_RS14685 0.42 +0.2
2,975,494 - A4249_RS14685 0.42 -0.7
2,975,494 - A4249_RS14685 0.42 +1.1
2,975,784 - A4249_RS14685 0.59 -0.3
2,975,784 - A4249_RS14685 0.59 -0.4
2,975,784 - A4249_RS14685 0.59 -0.3
2,975,799 + A4249_RS14685 0.60 +1.1
2,975,799 + A4249_RS14685 0.60 +0.6
2,975,799 + A4249_RS14685 0.60 -0.7
2,975,871 + A4249_RS14685 0.65 -0.1
2,975,871 + A4249_RS14685 0.65 -0.0
2,975,871 + A4249_RS14685 0.65 +0.4
2,975,871 + A4249_RS14685 0.65 -0.5
2,975,871 + A4249_RS14685 0.65 -0.6
2,975,872 - A4249_RS14685 0.65 -0.5
2,975,872 - A4249_RS14685 0.65 +0.1
2,975,872 - A4249_RS14685 0.65 +0.2
2,975,872 - A4249_RS14685 0.65 -0.2
2,975,886 + A4249_RS14685 0.66 +0.1
2,975,886 + A4249_RS14685 0.66 +1.1
2,975,886 + A4249_RS14685 0.66 -2.6
2,975,887 - A4249_RS14685 0.66 +0.1
2,975,887 - A4249_RS14685 0.66 -0.1
2,976,273 - A4249_RS14685 0.89 +0.7
2,976,456 + -0.3
2,976,457 - -0.6
2,976,457 - +0.3
2,976,566 - -0.1
2,976,566 - -0.2
2,976,703 - A4249_RS14690 0.17 -0.6
2,976,781 + A4249_RS14690 0.24 +0.8
2,976,781 + A4249_RS14690 0.24 +0.8
2,976,781 + A4249_RS14690 0.24 +0.1
2,976,782 - A4249_RS14690 0.24 -0.0
2,976,970 + A4249_RS14690 0.39 +0.4
2,976,970 + A4249_RS14690 0.39 -0.3
2,976,970 + A4249_RS14690 0.39 -1.5
2,976,970 + A4249_RS14690 0.39 -0.1
2,976,970 + A4249_RS14690 0.39 +0.0
2,976,970 + A4249_RS14690 0.39 +0.1
2,976,970 + A4249_RS14690 0.39 +1.3
2,976,970 + A4249_RS14690 0.39 -0.2
2,976,970 + A4249_RS14690 0.39 +0.4
2,976,970 + A4249_RS14690 0.39 +0.2
2,976,970 + A4249_RS14690 0.39 -0.4
2,976,970 + A4249_RS14690 0.39 +0.2
2,976,971 - A4249_RS14690 0.39 -0.3
2,976,971 - A4249_RS14690 0.39 -0.1
2,976,971 - A4249_RS14690 0.39 -0.9
2,976,971 - A4249_RS14690 0.39 +0.7
2,976,971 - A4249_RS14690 0.39 -1.5
2,976,971 - A4249_RS14690 0.39 -0.6
2,976,971 - A4249_RS14690 0.39 +0.4
2,976,971 - A4249_RS14690 0.39 -0.5
2,976,989 + A4249_RS14690 0.41 -1.1

Or see this region's nucleotide sequence