Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14485

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS14480 and A4249_RS14485 are separated by 112 nucleotidesA4249_RS14485 and A4249_RS14490 are separated by 44 nucleotides A4249_RS14480: A4249_RS14480 - helix-turn-helix domain-containing protein, at 2,928,897 to 2,930,000 _RS14480 A4249_RS14485: A4249_RS14485 - phosphoenolpyruvate--protein phosphotransferase, at 2,930,113 to 2,932,389 _RS14485 A4249_RS14490: A4249_RS14490 - aspartate kinase, at 2,932,434 to 2,933,708 _RS14490 Position (kb) 2930 2931 2932 2933Strain fitness (log2 ratio) -2 -1 0 1 2at 2929.300 kb on + strand, within A4249_RS14480at 2929.300 kb on + strand, within A4249_RS14480at 2929.300 kb on + strand, within A4249_RS14480at 2929.300 kb on + strand, within A4249_RS14480at 2929.301 kb on - strand, within A4249_RS14480at 2929.301 kb on - strand, within A4249_RS14480at 2929.301 kb on - strand, within A4249_RS14480at 2929.301 kb on - strand, within A4249_RS14480at 2929.420 kb on + strand, within A4249_RS14480at 2929.420 kb on + strand, within A4249_RS14480at 2929.420 kb on + strand, within A4249_RS14480at 2929.420 kb on + strand, within A4249_RS14480at 2929.420 kb on + strand, within A4249_RS14480at 2929.420 kb on + strand, within A4249_RS14480at 2929.421 kb on - strand, within A4249_RS14480at 2929.421 kb on - strand, within A4249_RS14480at 2929.421 kb on - strand, within A4249_RS14480at 2929.421 kb on - strand, within A4249_RS14480at 2929.421 kb on - strand, within A4249_RS14480at 2929.421 kb on - strand, within A4249_RS14480at 2929.421 kb on - strand, within A4249_RS14480at 2930.421 kb on - strand, within A4249_RS14485at 2930.459 kb on + strand, within A4249_RS14485at 2930.460 kb on - strand, within A4249_RS14485at 2930.465 kb on + strand, within A4249_RS14485at 2930.891 kb on + strand, within A4249_RS14485at 2931.471 kb on + strand, within A4249_RS14485at 2931.474 kb on - strand, within A4249_RS14485at 2931.736 kb on + strand, within A4249_RS14485at 2931.948 kb on - strand, within A4249_RS14485at 2931.948 kb on - strand, within A4249_RS14485at 2932.031 kb on + strand, within A4249_RS14485at 2932.032 kb on - strand, within A4249_RS14485at 2932.032 kb on - strand, within A4249_RS14485at 2932.032 kb on - strand, within A4249_RS14485at 2932.226 kb on + strandat 2932.226 kb on + strandat 2932.227 kb on - strandat 2932.227 kb on - strandat 2932.227 kb on - strandat 2932.227 kb on - strandat 2932.227 kb on - strandat 2932.414 kb on - strandat 2932.414 kb on - strandat 2932.435 kb on + strandat 2932.435 kb on + strandat 2932.435 kb on + strandat 2932.435 kb on + strandat 2932.436 kb on - strandat 2932.436 kb on - strandat 2932.436 kb on - strandat 2932.436 kb on - strandat 2932.436 kb on - strandat 2932.436 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,929,300 + A4249_RS14480 0.37 -0.1
2,929,300 + A4249_RS14480 0.37 +0.9
2,929,300 + A4249_RS14480 0.37 -0.3
2,929,300 + A4249_RS14480 0.37 -0.2
2,929,301 - A4249_RS14480 0.37 -0.6
2,929,301 - A4249_RS14480 0.37 -0.2
2,929,301 - A4249_RS14480 0.37 -0.1
2,929,301 - A4249_RS14480 0.37 +0.0
2,929,420 + A4249_RS14480 0.47 -0.2
2,929,420 + A4249_RS14480 0.47 +0.4
2,929,420 + A4249_RS14480 0.47 -0.8
2,929,420 + A4249_RS14480 0.47 +0.1
2,929,420 + A4249_RS14480 0.47 +0.4
2,929,420 + A4249_RS14480 0.47 -0.0
2,929,421 - A4249_RS14480 0.47 -1.2
2,929,421 - A4249_RS14480 0.47 +1.2
2,929,421 - A4249_RS14480 0.47 -0.4
2,929,421 - A4249_RS14480 0.47 +0.0
2,929,421 - A4249_RS14480 0.47 +0.0
2,929,421 - A4249_RS14480 0.47 -0.1
2,929,421 - A4249_RS14480 0.47 +0.7
2,930,421 - A4249_RS14485 0.14 +0.6
2,930,459 + A4249_RS14485 0.15 -0.7
2,930,460 - A4249_RS14485 0.15 +0.4
2,930,465 + A4249_RS14485 0.15 +0.1
2,930,891 + A4249_RS14485 0.34 -0.7
2,931,471 + A4249_RS14485 0.60 +0.3
2,931,474 - A4249_RS14485 0.60 +0.4
2,931,736 + A4249_RS14485 0.71 +1.0
2,931,948 - A4249_RS14485 0.81 +0.1
2,931,948 - A4249_RS14485 0.81 +0.2
2,932,031 + A4249_RS14485 0.84 +0.6
2,932,032 - A4249_RS14485 0.84 -0.2
2,932,032 - A4249_RS14485 0.84 +0.2
2,932,032 - A4249_RS14485 0.84 +0.6
2,932,226 + +1.6
2,932,226 + +2.4
2,932,227 - +1.0
2,932,227 - -1.9
2,932,227 - +1.0
2,932,227 - +2.1
2,932,227 - +0.1
2,932,414 - -0.4
2,932,414 - -0.2
2,932,435 + -0.7
2,932,435 + -1.5
2,932,435 + +0.9
2,932,435 + +0.1
2,932,436 - +0.8
2,932,436 - -1.1
2,932,436 - -0.7
2,932,436 - -0.2
2,932,436 - +1.1
2,932,436 - -0.3

Or see this region's nucleotide sequence