Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS14375 and A4249_RS14380 are separated by 77 nucleotides A4249_RS14380 and A4249_RS14385 are separated by 33 nucleotides A4249_RS14385 and A4249_RS14390 are separated by 70 nucleotides A4249_RS14390 and A4249_RS14395 are separated by 79 nucleotides A4249_RS14395 and A4249_RS16980 are separated by 71 nucleotides A4249_RS16980 and A4249_RS14400 overlap by 40 nucleotides
A4249_RS14375: A4249_RS14375 - YdbH domain-containing protein, at 2,904,314 to 2,907,511
_RS14375
A4249_RS14380: A4249_RS14380 - YnbE family lipoprotein, at 2,907,589 to 2,907,777
_RS14380
A4249_RS14385: A4249_RS14385 - DUF1318 domain-containing protein, at 2,907,811 to 2,908,170
_RS14385
A4249_RS14390: A4249_RS14390 - DNA cytosine methyltransferase, at 2,908,241 to 2,909,371
_RS14390
A4249_RS14395: A4249_RS14395 - hypothetical protein, at 2,909,451 to 2,909,906
_RS14395
A4249_RS16980: A4249_RS16980 - LytTR family transcriptional regulator DNA-binding domain-containing protein, at 2,909,978 to 2,910,091
_RS16980
A4249_RS14400: A4249_RS14400 - LytTR family transcriptional regulator DNA-binding domain-containing protein, at 2,910,052 to 2,910,741
_RS14400
Position (kb)
2908
2909
2910 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2907.549 kb on + strand at 2907.549 kb on + strand at 2907.549 kb on + strand at 2907.549 kb on + strand at 2907.549 kb on + strand at 2907.549 kb on + strand at 2907.549 kb on + strand at 2907.549 kb on + strand at 2907.550 kb on - strand at 2907.550 kb on - strand at 2907.550 kb on - strand at 2907.550 kb on - strand at 2907.550 kb on - strand at 2907.552 kb on + strand at 2907.552 kb on + strand at 2907.552 kb on + strand at 2907.553 kb on - strand at 2907.553 kb on - strand at 2907.694 kb on + strand, within A4249_RS14380 at 2907.694 kb on + strand, within A4249_RS14380 at 2907.694 kb on + strand, within A4249_RS14380 at 2907.694 kb on + strand, within A4249_RS14380 at 2907.695 kb on - strand, within A4249_RS14380 at 2907.695 kb on - strand, within A4249_RS14380 at 2907.695 kb on - strand, within A4249_RS14380 at 2907.695 kb on - strand, within A4249_RS14380 at 2907.695 kb on - strand, within A4249_RS14380 at 2907.955 kb on + strand, within A4249_RS14385 at 2907.955 kb on + strand, within A4249_RS14385 at 2908.036 kb on + strand, within A4249_RS14385 at 2908.036 kb on + strand, within A4249_RS14385 at 2908.036 kb on + strand, within A4249_RS14385 at 2908.037 kb on - strand, within A4249_RS14385 at 2908.037 kb on - strand, within A4249_RS14385 at 2908.135 kb on + strand at 2908.168 kb on + strand at 2908.168 kb on + strand at 2908.169 kb on - strand at 2908.200 kb on + strand at 2908.218 kb on + strand at 2908.218 kb on + strand at 2908.219 kb on - strand at 2908.219 kb on - strand at 2908.219 kb on - strand at 2908.368 kb on + strand, within A4249_RS14390 at 2908.455 kb on + strand, within A4249_RS14390 at 2908.455 kb on + strand, within A4249_RS14390 at 2908.455 kb on + strand, within A4249_RS14390 at 2908.455 kb on + strand, within A4249_RS14390 at 2908.455 kb on + strand, within A4249_RS14390 at 2908.455 kb on + strand, within A4249_RS14390 at 2908.455 kb on + strand, within A4249_RS14390 at 2908.455 kb on + strand, within A4249_RS14390 at 2908.455 kb on + strand, within A4249_RS14390 at 2908.456 kb on - strand, within A4249_RS14390 at 2908.456 kb on - strand, within A4249_RS14390 at 2908.456 kb on - strand, within A4249_RS14390 at 2908.456 kb on - strand, within A4249_RS14390 at 2908.456 kb on - strand, within A4249_RS14390 at 2908.456 kb on - strand, within A4249_RS14390 at 2908.456 kb on - strand, within A4249_RS14390 at 2908.921 kb on + strand, within A4249_RS14390 at 2908.922 kb on - strand, within A4249_RS14390 at 2908.924 kb on - strand, within A4249_RS14390 at 2908.924 kb on - strand, within A4249_RS14390 at 2909.382 kb on + strand at 2909.382 kb on + strand at 2909.383 kb on - strand at 2909.383 kb on - strand at 2909.514 kb on + strand, within A4249_RS14395 at 2909.658 kb on + strand, within A4249_RS14395 at 2909.658 kb on + strand, within A4249_RS14395 at 2909.658 kb on + strand, within A4249_RS14395 at 2909.658 kb on + strand, within A4249_RS14395 at 2909.659 kb on - strand, within A4249_RS14395 at 2909.814 kb on + strand, within A4249_RS14395 at 2909.815 kb on - strand, within A4249_RS14395 at 2910.216 kb on - strand, within A4249_RS14400 at 2910.216 kb on - strand, within A4249_RS14400
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,907,549 + -1.2 2,907,549 + -0.9 2,907,549 + -0.2 2,907,549 + +0.4 2,907,549 + -0.5 2,907,549 + -1.4 2,907,549 + +0.3 2,907,549 + -1.0 2,907,550 - +0.8 2,907,550 - +0.2 2,907,550 - +0.3 2,907,550 - -0.2 2,907,550 - +0.2 2,907,552 + +0.7 2,907,552 + -0.2 2,907,552 + -0.4 2,907,553 - -1.1 2,907,553 - +0.1 2,907,694 + A4249_RS14380 0.56 -0.0 2,907,694 + A4249_RS14380 0.56 -0.3 2,907,694 + A4249_RS14380 0.56 -0.9 2,907,694 + A4249_RS14380 0.56 +0.1 2,907,695 - A4249_RS14380 0.56 -0.9 2,907,695 - A4249_RS14380 0.56 +0.2 2,907,695 - A4249_RS14380 0.56 -0.4 2,907,695 - A4249_RS14380 0.56 +0.2 2,907,695 - A4249_RS14380 0.56 +0.3 2,907,955 + A4249_RS14385 0.40 +0.1 2,907,955 + A4249_RS14385 0.40 +0.6 2,908,036 + A4249_RS14385 0.62 +0.0 2,908,036 + A4249_RS14385 0.62 -0.4 2,908,036 + A4249_RS14385 0.62 +0.5 2,908,037 - A4249_RS14385 0.63 -0.7 2,908,037 - A4249_RS14385 0.63 -0.3 2,908,135 + -0.0 2,908,168 + +0.1 2,908,168 + -1.3 2,908,169 - -0.3 2,908,200 + +0.7 2,908,218 + +0.4 2,908,218 + +0.3 2,908,219 - -0.4 2,908,219 - +1.0 2,908,219 - -0.2 2,908,368 + A4249_RS14390 0.11 +0.6 2,908,455 + A4249_RS14390 0.19 +0.9 2,908,455 + A4249_RS14390 0.19 -0.2 2,908,455 + A4249_RS14390 0.19 -0.2 2,908,455 + A4249_RS14390 0.19 +0.3 2,908,455 + A4249_RS14390 0.19 +0.3 2,908,455 + A4249_RS14390 0.19 +0.4 2,908,455 + A4249_RS14390 0.19 +0.9 2,908,455 + A4249_RS14390 0.19 -0.5 2,908,455 + A4249_RS14390 0.19 +0.5 2,908,456 - A4249_RS14390 0.19 -0.6 2,908,456 - A4249_RS14390 0.19 +0.6 2,908,456 - A4249_RS14390 0.19 -0.2 2,908,456 - A4249_RS14390 0.19 -0.4 2,908,456 - A4249_RS14390 0.19 -0.6 2,908,456 - A4249_RS14390 0.19 +0.0 2,908,456 - A4249_RS14390 0.19 -1.8 2,908,921 + A4249_RS14390 0.60 -1.6 2,908,922 - A4249_RS14390 0.60 -0.0 2,908,924 - A4249_RS14390 0.60 +1.1 2,908,924 - A4249_RS14390 0.60 +2.6 2,909,382 + +0.5 2,909,382 + -0.1 2,909,383 - +0.5 2,909,383 - -0.6 2,909,514 + A4249_RS14395 0.14 -0.2 2,909,658 + A4249_RS14395 0.45 +0.6 2,909,658 + A4249_RS14395 0.45 +0.5 2,909,658 + A4249_RS14395 0.45 +2.4 2,909,658 + A4249_RS14395 0.45 -0.2 2,909,659 - A4249_RS14395 0.46 -1.4 2,909,814 + A4249_RS14395 0.80 -0.4 2,909,815 - A4249_RS14395 0.80 -0.2 2,910,216 - A4249_RS14400 0.24 -0.2 2,910,216 - A4249_RS14400 0.24 +0.8
Or see this region's nucleotide sequence