Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS14245 and A4249_RS14250 are separated by 126 nucleotides A4249_RS14250 and A4249_RS14255 are separated by 30 nucleotides A4249_RS14255 and A4249_RS14260 overlap by 4 nucleotides A4249_RS14260 and A4249_RS14265 overlap by 4 nucleotides A4249_RS14265 and A4249_RS14270 are separated by 95 nucleotides
A4249_RS14245: A4249_RS14245 - TVP38/TMEM64 family protein, at 2,869,399 to 2,870,148
_RS14245
A4249_RS14250: A4249_RS14250 - 50S ribosomal protein L34, at 2,870,275 to 2,870,409
_RS14250
A4249_RS14255: A4249_RS14255 - ribonuclease P protein component, at 2,870,440 to 2,870,844
_RS14255
A4249_RS14260: A4249_RS14260 - membrane protein insertase YidC, at 2,870,841 to 2,872,637
_RS14260
A4249_RS14265: A4249_RS14265 - ribosome biogenesis GTP-binding protein YihA/YsxC, at 2,872,634 to 2,873,287
_RS14265
A4249_RS14270: A4249_RS14270 - pitrilysin family protein, at 2,873,383 to 2,876,247
_RS14270
Position (kb)
2870
2871
2872
2873 Strain fitness (log2 ratio)
-2
-1
0
1 at 2869.877 kb on + strand, within A4249_RS14245 at 2869.877 kb on + strand, within A4249_RS14245 at 2869.877 kb on + strand, within A4249_RS14245 at 2869.877 kb on + strand, within A4249_RS14245 at 2869.878 kb on - strand, within A4249_RS14245 at 2869.878 kb on - strand, within A4249_RS14245 at 2869.953 kb on - strand, within A4249_RS14245 at 2870.000 kb on + strand, within A4249_RS14245 at 2870.000 kb on + strand, within A4249_RS14245 at 2870.000 kb on + strand, within A4249_RS14245 at 2870.000 kb on + strand, within A4249_RS14245 at 2870.000 kb on + strand, within A4249_RS14245 at 2870.001 kb on - strand, within A4249_RS14245 at 2870.001 kb on - strand, within A4249_RS14245 at 2870.001 kb on - strand, within A4249_RS14245 at 2870.049 kb on - strand, within A4249_RS14245 at 2870.049 kb on - strand, within A4249_RS14245 at 2870.049 kb on - strand, within A4249_RS14245 at 2870.049 kb on - strand, within A4249_RS14245 at 2870.453 kb on + strand at 2870.453 kb on + strand at 2870.453 kb on + strand at 2870.766 kb on + strand, within A4249_RS14255 at 2872.579 kb on - strand at 2873.286 kb on - strand at 2873.384 kb on + strand at 2873.384 kb on + strand at 2873.384 kb on + strand at 2873.385 kb on - strand at 2873.385 kb on - strand at 2873.570 kb on + strand at 2873.636 kb on + strand at 2873.637 kb on - strand at 2873.637 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,869,877 + A4249_RS14245 0.64 +1.0 2,869,877 + A4249_RS14245 0.64 -0.6 2,869,877 + A4249_RS14245 0.64 +0.2 2,869,877 + A4249_RS14245 0.64 -0.1 2,869,878 - A4249_RS14245 0.64 +0.1 2,869,878 - A4249_RS14245 0.64 +0.1 2,869,953 - A4249_RS14245 0.74 -0.4 2,870,000 + A4249_RS14245 0.80 -0.7 2,870,000 + A4249_RS14245 0.80 -0.1 2,870,000 + A4249_RS14245 0.80 -0.4 2,870,000 + A4249_RS14245 0.80 +0.1 2,870,000 + A4249_RS14245 0.80 +0.2 2,870,001 - A4249_RS14245 0.80 +0.0 2,870,001 - A4249_RS14245 0.80 +0.1 2,870,001 - A4249_RS14245 0.80 +0.6 2,870,049 - A4249_RS14245 0.87 +0.4 2,870,049 - A4249_RS14245 0.87 +0.2 2,870,049 - A4249_RS14245 0.87 -0.1 2,870,049 - A4249_RS14245 0.87 +0.2 2,870,453 + -0.3 2,870,453 + -0.7 2,870,453 + -1.9 2,870,766 + A4249_RS14255 0.80 -0.5 2,872,579 - +0.6 2,873,286 - -0.3 2,873,384 + +0.4 2,873,384 + +0.4 2,873,384 + +0.7 2,873,385 - -0.5 2,873,385 - -0.4 2,873,570 + -0.9 2,873,636 + +0.0 2,873,637 - -0.4 2,873,637 - +0.4
Or see this region's nucleotide sequence