Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14245

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS14240 and A4249_RS14245 overlap by 4 nucleotidesA4249_RS14245 and A4249_RS14250 are separated by 126 nucleotidesA4249_RS14250 and A4249_RS14255 are separated by 30 nucleotidesA4249_RS14255 and A4249_RS14260 overlap by 4 nucleotides A4249_RS14240: A4249_RS14240 - HAMP domain-containing sensor histidine kinase, at 2,867,930 to 2,869,402 _RS14240 A4249_RS14245: A4249_RS14245 - TVP38/TMEM64 family protein, at 2,869,399 to 2,870,148 _RS14245 A4249_RS14250: A4249_RS14250 - 50S ribosomal protein L34, at 2,870,275 to 2,870,409 _RS14250 A4249_RS14255: A4249_RS14255 - ribonuclease P protein component, at 2,870,440 to 2,870,844 _RS14255 A4249_RS14260: A4249_RS14260 - membrane protein insertase YidC, at 2,870,841 to 2,872,637 _RS14260 Position (kb) 2869 2870 2871Strain fitness (log2 ratio) -2 -1 0 1 2at 2869.449 kb on + strandat 2869.449 kb on + strandat 2869.449 kb on + strandat 2869.450 kb on - strandat 2869.583 kb on + strand, within A4249_RS14245at 2869.583 kb on + strand, within A4249_RS14245at 2869.584 kb on - strand, within A4249_RS14245at 2869.584 kb on - strand, within A4249_RS14245at 2869.584 kb on - strand, within A4249_RS14245at 2869.584 kb on - strand, within A4249_RS14245at 2869.628 kb on + strand, within A4249_RS14245at 2869.628 kb on + strand, within A4249_RS14245at 2869.628 kb on + strand, within A4249_RS14245at 2869.628 kb on + strand, within A4249_RS14245at 2869.628 kb on + strand, within A4249_RS14245at 2869.628 kb on + strand, within A4249_RS14245at 2869.628 kb on + strand, within A4249_RS14245at 2869.628 kb on + strand, within A4249_RS14245at 2869.628 kb on + strand, within A4249_RS14245at 2869.629 kb on - strand, within A4249_RS14245at 2869.629 kb on - strand, within A4249_RS14245at 2869.814 kb on + strand, within A4249_RS14245at 2869.815 kb on - strand, within A4249_RS14245at 2869.820 kb on + strand, within A4249_RS14245at 2869.820 kb on + strand, within A4249_RS14245at 2869.820 kb on + strand, within A4249_RS14245at 2869.820 kb on + strand, within A4249_RS14245at 2869.820 kb on + strand, within A4249_RS14245at 2869.820 kb on + strand, within A4249_RS14245at 2869.820 kb on + strand, within A4249_RS14245at 2869.820 kb on + strand, within A4249_RS14245at 2869.820 kb on + strand, within A4249_RS14245at 2869.820 kb on + strand, within A4249_RS14245at 2869.820 kb on + strand, within A4249_RS14245at 2869.820 kb on + strand, within A4249_RS14245at 2869.820 kb on + strand, within A4249_RS14245at 2869.821 kb on - strand, within A4249_RS14245at 2869.821 kb on - strand, within A4249_RS14245at 2869.821 kb on - strand, within A4249_RS14245at 2869.821 kb on - strand, within A4249_RS14245at 2869.821 kb on - strand, within A4249_RS14245at 2869.821 kb on - strand, within A4249_RS14245at 2869.821 kb on - strand, within A4249_RS14245at 2869.821 kb on - strand, within A4249_RS14245at 2869.821 kb on - strand, within A4249_RS14245at 2869.821 kb on - strand, within A4249_RS14245at 2869.821 kb on - strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.823 kb on + strand, within A4249_RS14245at 2869.824 kb on - strand, within A4249_RS14245at 2869.824 kb on - strand, within A4249_RS14245at 2869.824 kb on - strand, within A4249_RS14245at 2869.824 kb on - strand, within A4249_RS14245at 2869.824 kb on - strand, within A4249_RS14245at 2869.824 kb on - strand, within A4249_RS14245at 2869.824 kb on - strand, within A4249_RS14245at 2869.824 kb on - strand, within A4249_RS14245at 2869.824 kb on - strand, within A4249_RS14245at 2869.824 kb on - strand, within A4249_RS14245at 2869.824 kb on - strand, within A4249_RS14245at 2869.824 kb on - strand, within A4249_RS14245at 2869.824 kb on - strand, within A4249_RS14245at 2869.877 kb on + strand, within A4249_RS14245at 2869.877 kb on + strand, within A4249_RS14245at 2869.877 kb on + strand, within A4249_RS14245at 2869.877 kb on + strand, within A4249_RS14245at 2869.878 kb on - strand, within A4249_RS14245at 2869.878 kb on - strand, within A4249_RS14245at 2869.953 kb on - strand, within A4249_RS14245at 2870.000 kb on + strand, within A4249_RS14245at 2870.000 kb on + strand, within A4249_RS14245at 2870.000 kb on + strand, within A4249_RS14245at 2870.000 kb on + strand, within A4249_RS14245at 2870.000 kb on + strand, within A4249_RS14245at 2870.001 kb on - strand, within A4249_RS14245at 2870.001 kb on - strand, within A4249_RS14245at 2870.001 kb on - strand, within A4249_RS14245at 2870.049 kb on - strand, within A4249_RS14245at 2870.049 kb on - strand, within A4249_RS14245at 2870.049 kb on - strand, within A4249_RS14245at 2870.049 kb on - strand, within A4249_RS14245at 2870.453 kb on + strandat 2870.453 kb on + strandat 2870.453 kb on + strandat 2870.766 kb on + strand, within A4249_RS14255

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,869,449 + +0.6
2,869,449 + +0.4
2,869,449 + +0.4
2,869,450 - +0.6
2,869,583 + A4249_RS14245 0.25 +0.1
2,869,583 + A4249_RS14245 0.25 +0.8
2,869,584 - A4249_RS14245 0.25 +0.4
2,869,584 - A4249_RS14245 0.25 +0.3
2,869,584 - A4249_RS14245 0.25 -0.2
2,869,584 - A4249_RS14245 0.25 +0.5
2,869,628 + A4249_RS14245 0.31 -0.6
2,869,628 + A4249_RS14245 0.31 +0.3
2,869,628 + A4249_RS14245 0.31 -0.0
2,869,628 + A4249_RS14245 0.31 +0.2
2,869,628 + A4249_RS14245 0.31 +0.1
2,869,628 + A4249_RS14245 0.31 -1.3
2,869,628 + A4249_RS14245 0.31 +0.7
2,869,628 + A4249_RS14245 0.31 +1.0
2,869,628 + A4249_RS14245 0.31 -0.1
2,869,629 - A4249_RS14245 0.31 -0.1
2,869,629 - A4249_RS14245 0.31 +0.2
2,869,814 + A4249_RS14245 0.55 +0.4
2,869,815 - A4249_RS14245 0.55 -0.4
2,869,820 + A4249_RS14245 0.56 +0.1
2,869,820 + A4249_RS14245 0.56 -0.1
2,869,820 + A4249_RS14245 0.56 -0.1
2,869,820 + A4249_RS14245 0.56 -1.3
2,869,820 + A4249_RS14245 0.56 -0.6
2,869,820 + A4249_RS14245 0.56 +0.2
2,869,820 + A4249_RS14245 0.56 +0.1
2,869,820 + A4249_RS14245 0.56 +0.8
2,869,820 + A4249_RS14245 0.56 +0.7
2,869,820 + A4249_RS14245 0.56 +0.5
2,869,820 + A4249_RS14245 0.56 -0.2
2,869,820 + A4249_RS14245 0.56 -0.2
2,869,820 + A4249_RS14245 0.56 -0.6
2,869,821 - A4249_RS14245 0.56 -0.0
2,869,821 - A4249_RS14245 0.56 -0.3
2,869,821 - A4249_RS14245 0.56 -0.0
2,869,821 - A4249_RS14245 0.56 +0.1
2,869,821 - A4249_RS14245 0.56 +0.2
2,869,821 - A4249_RS14245 0.56 +0.3
2,869,821 - A4249_RS14245 0.56 +0.1
2,869,821 - A4249_RS14245 0.56 +0.9
2,869,821 - A4249_RS14245 0.56 +0.1
2,869,821 - A4249_RS14245 0.56 +0.5
2,869,821 - A4249_RS14245 0.56 +0.0
2,869,823 + A4249_RS14245 0.57 -0.1
2,869,823 + A4249_RS14245 0.57 +0.8
2,869,823 + A4249_RS14245 0.57 +0.3
2,869,823 + A4249_RS14245 0.57 +0.3
2,869,823 + A4249_RS14245 0.57 +0.4
2,869,823 + A4249_RS14245 0.57 +0.3
2,869,823 + A4249_RS14245 0.57 +0.2
2,869,823 + A4249_RS14245 0.57 -0.1
2,869,823 + A4249_RS14245 0.57 +0.0
2,869,823 + A4249_RS14245 0.57 +0.0
2,869,823 + A4249_RS14245 0.57 +0.1
2,869,823 + A4249_RS14245 0.57 +1.1
2,869,823 + A4249_RS14245 0.57 +0.3
2,869,823 + A4249_RS14245 0.57 +0.0
2,869,823 + A4249_RS14245 0.57 +0.3
2,869,823 + A4249_RS14245 0.57 +0.1
2,869,823 + A4249_RS14245 0.57 -0.1
2,869,823 + A4249_RS14245 0.57 -0.4
2,869,823 + A4249_RS14245 0.57 +1.0
2,869,823 + A4249_RS14245 0.57 +1.0
2,869,823 + A4249_RS14245 0.57 +0.1
2,869,823 + A4249_RS14245 0.57 +0.0
2,869,823 + A4249_RS14245 0.57 +0.1
2,869,823 + A4249_RS14245 0.57 -0.1
2,869,823 + A4249_RS14245 0.57 +0.0
2,869,823 + A4249_RS14245 0.57 +0.7
2,869,823 + A4249_RS14245 0.57 +0.6
2,869,824 - A4249_RS14245 0.57 +0.0
2,869,824 - A4249_RS14245 0.57 -0.4
2,869,824 - A4249_RS14245 0.57 -0.9
2,869,824 - A4249_RS14245 0.57 +0.6
2,869,824 - A4249_RS14245 0.57 +0.2
2,869,824 - A4249_RS14245 0.57 -0.2
2,869,824 - A4249_RS14245 0.57 +1.8
2,869,824 - A4249_RS14245 0.57 +0.4
2,869,824 - A4249_RS14245 0.57 -0.2
2,869,824 - A4249_RS14245 0.57 +0.2
2,869,824 - A4249_RS14245 0.57 +0.3
2,869,824 - A4249_RS14245 0.57 +0.1
2,869,824 - A4249_RS14245 0.57 +0.1
2,869,877 + A4249_RS14245 0.64 +1.0
2,869,877 + A4249_RS14245 0.64 -0.6
2,869,877 + A4249_RS14245 0.64 +0.2
2,869,877 + A4249_RS14245 0.64 -0.1
2,869,878 - A4249_RS14245 0.64 +0.1
2,869,878 - A4249_RS14245 0.64 +0.1
2,869,953 - A4249_RS14245 0.74 -0.4
2,870,000 + A4249_RS14245 0.80 -0.7
2,870,000 + A4249_RS14245 0.80 -0.1
2,870,000 + A4249_RS14245 0.80 -0.4
2,870,000 + A4249_RS14245 0.80 +0.1
2,870,000 + A4249_RS14245 0.80 +0.2
2,870,001 - A4249_RS14245 0.80 +0.0
2,870,001 - A4249_RS14245 0.80 +0.1
2,870,001 - A4249_RS14245 0.80 +0.6
2,870,049 - A4249_RS14245 0.87 +0.4
2,870,049 - A4249_RS14245 0.87 +0.2
2,870,049 - A4249_RS14245 0.87 -0.1
2,870,049 - A4249_RS14245 0.87 +0.2
2,870,453 + -0.3
2,870,453 + -0.7
2,870,453 + -1.9
2,870,766 + A4249_RS14255 0.80 -0.5

Or see this region's nucleotide sequence