Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS13995 and A4249_RS14000 are separated by 18 nucleotides A4249_RS14000 and A4249_RS14005 are separated by 108 nucleotides A4249_RS14005 and A4249_RS14010 are separated by 242 nucleotides A4249_RS14010 and A4249_RS14015 are separated by 23 nucleotides
A4249_RS13995: A4249_RS13995 - transcription termination factor NusA, at 2,821,374 to 2,823,107
_RS13995
A4249_RS14000: A4249_RS14000 - RNA-binding protein, at 2,823,126 to 2,823,785
_RS14000
A4249_RS14005: A4249_RS14005 - translation initiation factor IF-2, at 2,823,894 to 2,826,920
_RS14005
A4249_RS14010: A4249_RS14010 - DUF2141 domain-containing protein, at 2,827,163 to 2,827,588
_RS14010
A4249_RS14015: A4249_RS14015 - carotenoid oxygenase family protein, at 2,827,612 to 2,829,090
_RS14015
Position (kb)
2823
2824
2825
2826
2827 Strain fitness (log2 ratio)
-2
-1
0
1 at 2822.985 kb on + strand at 2823.018 kb on + strand at 2823.018 kb on + strand at 2823.019 kb on - strand at 2823.019 kb on - strand at 2823.125 kb on + strand at 2823.125 kb on + strand at 2823.125 kb on + strand at 2823.125 kb on + strand at 2823.125 kb on + strand at 2823.125 kb on + strand at 2823.125 kb on + strand at 2823.125 kb on + strand at 2823.125 kb on + strand at 2823.125 kb on + strand at 2823.125 kb on + strand at 2823.126 kb on - strand at 2823.126 kb on - strand at 2823.126 kb on - strand at 2823.126 kb on - strand at 2823.126 kb on - strand at 2823.126 kb on - strand at 2823.126 kb on - strand at 2823.126 kb on - strand at 2823.126 kb on - strand at 2823.126 kb on - strand at 2823.126 kb on - strand at 2823.126 kb on - strand at 2823.126 kb on - strand at 2823.126 kb on - strand at 2823.126 kb on - strand at 2823.126 kb on - strand at 2823.126 kb on - strand at 2823.847 kb on + strand at 2823.847 kb on + strand at 2823.850 kb on + strand at 2823.850 kb on + strand at 2823.850 kb on + strand at 2823.850 kb on + strand at 2823.850 kb on + strand at 2823.850 kb on + strand at 2826.918 kb on + strand at 2826.918 kb on + strand at 2826.918 kb on + strand at 2826.918 kb on + strand at 2826.918 kb on + strand at 2826.919 kb on - strand at 2826.919 kb on - strand at 2826.919 kb on - strand at 2826.919 kb on - strand at 2826.919 kb on - strand at 2826.919 kb on - strand at 2826.919 kb on - strand at 2827.154 kb on + strand at 2827.154 kb on + strand at 2827.155 kb on - strand at 2827.313 kb on + strand, within A4249_RS14010 at 2827.313 kb on + strand, within A4249_RS14010 at 2827.313 kb on + strand, within A4249_RS14010 at 2827.313 kb on + strand, within A4249_RS14010 at 2827.314 kb on - strand, within A4249_RS14010 at 2827.314 kb on - strand, within A4249_RS14010 at 2827.314 kb on - strand, within A4249_RS14010 at 2827.372 kb on + strand, within A4249_RS14010 at 2827.372 kb on + strand, within A4249_RS14010 at 2827.372 kb on + strand, within A4249_RS14010 at 2827.372 kb on + strand, within A4249_RS14010 at 2827.372 kb on + strand, within A4249_RS14010 at 2827.372 kb on + strand, within A4249_RS14010 at 2827.372 kb on + strand, within A4249_RS14010 at 2827.372 kb on + strand, within A4249_RS14010 at 2827.373 kb on - strand, within A4249_RS14010 at 2827.373 kb on - strand, within A4249_RS14010 at 2827.373 kb on - strand, within A4249_RS14010 at 2827.406 kb on + strand, within A4249_RS14010 at 2827.406 kb on + strand, within A4249_RS14010 at 2827.407 kb on - strand, within A4249_RS14010 at 2827.407 kb on - strand, within A4249_RS14010 at 2827.407 kb on - strand, within A4249_RS14010 at 2827.407 kb on - strand, within A4249_RS14010 at 2827.407 kb on - strand, within A4249_RS14010 at 2827.587 kb on - strand at 2827.587 kb on - strand at 2827.587 kb on - strand at 2827.828 kb on + strand, within A4249_RS14015 at 2827.828 kb on + strand, within A4249_RS14015
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,822,985 + -0.9 2,823,018 + -0.7 2,823,018 + -1.0 2,823,019 - -0.1 2,823,019 - -1.4 2,823,125 + +0.3 2,823,125 + +0.3 2,823,125 + -0.3 2,823,125 + +0.7 2,823,125 + -0.8 2,823,125 + -1.3 2,823,125 + +0.8 2,823,125 + -0.3 2,823,125 + -0.2 2,823,125 + +0.4 2,823,125 + -1.3 2,823,126 - +0.1 2,823,126 - +0.8 2,823,126 - -0.0 2,823,126 - +0.2 2,823,126 - +0.6 2,823,126 - -0.3 2,823,126 - +0.0 2,823,126 - +0.3 2,823,126 - -0.2 2,823,126 - -0.4 2,823,126 - -0.7 2,823,126 - -0.1 2,823,126 - -0.2 2,823,126 - -0.9 2,823,126 - +0.1 2,823,126 - -0.4 2,823,126 - -0.7 2,823,847 + -0.7 2,823,847 + -1.2 2,823,850 + -0.2 2,823,850 + -1.1 2,823,850 + -0.9 2,823,850 + -1.0 2,823,850 + -0.6 2,823,850 + -0.0 2,826,918 + -0.5 2,826,918 + -0.6 2,826,918 + +0.1 2,826,918 + -0.2 2,826,918 + +1.1 2,826,919 - +1.6 2,826,919 - +0.3 2,826,919 - +0.3 2,826,919 - -1.9 2,826,919 - -1.8 2,826,919 - -0.2 2,826,919 - -0.4 2,827,154 + -0.7 2,827,154 + -0.7 2,827,155 - +0.9 2,827,313 + A4249_RS14010 0.35 -0.5 2,827,313 + A4249_RS14010 0.35 -0.2 2,827,313 + A4249_RS14010 0.35 -0.3 2,827,313 + A4249_RS14010 0.35 -0.0 2,827,314 - A4249_RS14010 0.35 -0.9 2,827,314 - A4249_RS14010 0.35 +0.2 2,827,314 - A4249_RS14010 0.35 -1.1 2,827,372 + A4249_RS14010 0.49 -0.5 2,827,372 + A4249_RS14010 0.49 +0.3 2,827,372 + A4249_RS14010 0.49 -1.4 2,827,372 + A4249_RS14010 0.49 -1.0 2,827,372 + A4249_RS14010 0.49 -0.1 2,827,372 + A4249_RS14010 0.49 -0.9 2,827,372 + A4249_RS14010 0.49 -0.1 2,827,372 + A4249_RS14010 0.49 -1.6 2,827,373 - A4249_RS14010 0.49 +0.0 2,827,373 - A4249_RS14010 0.49 -1.2 2,827,373 - A4249_RS14010 0.49 -0.4 2,827,406 + A4249_RS14010 0.57 -0.3 2,827,406 + A4249_RS14010 0.57 +0.4 2,827,407 - A4249_RS14010 0.57 -0.0 2,827,407 - A4249_RS14010 0.57 -0.3 2,827,407 - A4249_RS14010 0.57 -1.1 2,827,407 - A4249_RS14010 0.57 -1.2 2,827,407 - A4249_RS14010 0.57 -0.4 2,827,587 - -0.4 2,827,587 - -0.3 2,827,587 - -0.2 2,827,828 + A4249_RS14015 0.15 +0.3 2,827,828 + A4249_RS14015 0.15 +0.1
Or see this region's nucleotide sequence