Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS13750 and A4249_RS13755 are separated by 10 nucleotides A4249_RS13755 and A4249_RS13760 overlap by 2 nucleotides A4249_RS13760 and A4249_RS13765 are separated by 65 nucleotides A4249_RS13765 and A4249_RS13770 are separated by 4 nucleotides
A4249_RS13750: A4249_RS13750 - hypothetical protein, at 2,778,612 to 2,778,992
_RS13750
A4249_RS13755: A4249_RS13755 - thiamine phosphate synthase, at 2,779,003 to 2,779,647
_RS13755
A4249_RS13760: A4249_RS13760 - YggS family pyridoxal phosphate-dependent enzyme, at 2,779,646 to 2,780,362
_RS13760
A4249_RS13765: A4249_RS13765 - response regulator transcription factor, at 2,780,428 to 2,781,114
_RS13765
A4249_RS13770: A4249_RS13770 - hypothetical protein, at 2,781,119 to 2,781,718
_RS13770
Position (kb)
2779
2780
2781 Strain fitness (log2 ratio)
-2
-1
0
1 at 2778.855 kb on + strand, within A4249_RS13750 at 2778.855 kb on + strand, within A4249_RS13750 at 2778.856 kb on - strand, within A4249_RS13750 at 2778.856 kb on - strand, within A4249_RS13750 at 2778.858 kb on + strand, within A4249_RS13750 at 2780.135 kb on + strand, within A4249_RS13760 at 2780.135 kb on + strand, within A4249_RS13760 at 2780.135 kb on + strand, within A4249_RS13760 at 2780.135 kb on + strand, within A4249_RS13760 at 2780.136 kb on - strand, within A4249_RS13760 at 2780.136 kb on - strand, within A4249_RS13760 at 2780.136 kb on - strand, within A4249_RS13760 at 2780.268 kb on - strand, within A4249_RS13760 at 2780.353 kb on + strand at 2780.353 kb on + strand at 2780.353 kb on + strand at 2780.353 kb on + strand at 2780.353 kb on + strand at 2780.353 kb on + strand at 2780.354 kb on - strand at 2780.354 kb on - strand at 2780.354 kb on - strand at 2780.361 kb on - strand at 2780.361 kb on - strand at 2780.374 kb on + strand at 2780.375 kb on - strand at 2780.375 kb on - strand at 2781.112 kb on + strand at 2781.112 kb on + strand at 2781.113 kb on - strand at 2781.192 kb on + strand, within A4249_RS13770 at 2781.192 kb on + strand, within A4249_RS13770 at 2781.192 kb on + strand, within A4249_RS13770 at 2781.192 kb on + strand, within A4249_RS13770 at 2781.193 kb on - strand, within A4249_RS13770 at 2781.193 kb on - strand, within A4249_RS13770 at 2781.251 kb on + strand, within A4249_RS13770 at 2781.252 kb on - strand, within A4249_RS13770 at 2781.354 kb on + strand, within A4249_RS13770 at 2781.354 kb on + strand, within A4249_RS13770 at 2781.354 kb on + strand, within A4249_RS13770 at 2781.354 kb on + strand, within A4249_RS13770 at 2781.354 kb on + strand, within A4249_RS13770 at 2781.354 kb on + strand, within A4249_RS13770 at 2781.354 kb on + strand, within A4249_RS13770 at 2781.355 kb on - strand, within A4249_RS13770 at 2781.355 kb on - strand, within A4249_RS13770 at 2781.355 kb on - strand, within A4249_RS13770 at 2781.355 kb on - strand, within A4249_RS13770
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,778,855 + A4249_RS13750 0.64 +0.3 2,778,855 + A4249_RS13750 0.64 -1.0 2,778,856 - A4249_RS13750 0.64 -0.1 2,778,856 - A4249_RS13750 0.64 -0.2 2,778,858 + A4249_RS13750 0.65 -0.4 2,780,135 + A4249_RS13760 0.68 -0.4 2,780,135 + A4249_RS13760 0.68 -0.7 2,780,135 + A4249_RS13760 0.68 +0.9 2,780,135 + A4249_RS13760 0.68 +0.4 2,780,136 - A4249_RS13760 0.68 -1.0 2,780,136 - A4249_RS13760 0.68 +0.8 2,780,136 - A4249_RS13760 0.68 -0.7 2,780,268 - A4249_RS13760 0.87 -0.2 2,780,353 + -0.5 2,780,353 + -0.2 2,780,353 + +0.4 2,780,353 + +0.8 2,780,353 + +1.3 2,780,353 + -0.4 2,780,354 - +0.1 2,780,354 - -0.2 2,780,354 - +0.1 2,780,361 - +0.3 2,780,361 - +0.9 2,780,374 + +0.4 2,780,375 - +0.7 2,780,375 - +1.0 2,781,112 + +0.8 2,781,112 + -0.9 2,781,113 - -1.9 2,781,192 + A4249_RS13770 0.12 -0.1 2,781,192 + A4249_RS13770 0.12 -0.4 2,781,192 + A4249_RS13770 0.12 -0.0 2,781,192 + A4249_RS13770 0.12 +0.6 2,781,193 - A4249_RS13770 0.12 +0.0 2,781,193 - A4249_RS13770 0.12 -0.4 2,781,251 + A4249_RS13770 0.22 -0.8 2,781,252 - A4249_RS13770 0.22 +1.0 2,781,354 + A4249_RS13770 0.39 +0.5 2,781,354 + A4249_RS13770 0.39 -0.1 2,781,354 + A4249_RS13770 0.39 +0.8 2,781,354 + A4249_RS13770 0.39 +0.1 2,781,354 + A4249_RS13770 0.39 -0.4 2,781,354 + A4249_RS13770 0.39 -0.5 2,781,354 + A4249_RS13770 0.39 +0.3 2,781,355 - A4249_RS13770 0.39 -0.3 2,781,355 - A4249_RS13770 0.39 +0.4 2,781,355 - A4249_RS13770 0.39 +0.1 2,781,355 - A4249_RS13770 0.39 -0.6
Or see this region's nucleotide sequence