Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS13760

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS13750 and A4249_RS13755 are separated by 10 nucleotidesA4249_RS13755 and A4249_RS13760 overlap by 2 nucleotidesA4249_RS13760 and A4249_RS13765 are separated by 65 nucleotidesA4249_RS13765 and A4249_RS13770 are separated by 4 nucleotides A4249_RS13750: A4249_RS13750 - hypothetical protein, at 2,778,612 to 2,778,992 _RS13750 A4249_RS13755: A4249_RS13755 - thiamine phosphate synthase, at 2,779,003 to 2,779,647 _RS13755 A4249_RS13760: A4249_RS13760 - YggS family pyridoxal phosphate-dependent enzyme, at 2,779,646 to 2,780,362 _RS13760 A4249_RS13765: A4249_RS13765 - response regulator transcription factor, at 2,780,428 to 2,781,114 _RS13765 A4249_RS13770: A4249_RS13770 - hypothetical protein, at 2,781,119 to 2,781,718 _RS13770 Position (kb) 2779 2780 2781Strain fitness (log2 ratio) -2 -1 0 1at 2778.855 kb on + strand, within A4249_RS13750at 2778.855 kb on + strand, within A4249_RS13750at 2778.856 kb on - strand, within A4249_RS13750at 2778.856 kb on - strand, within A4249_RS13750at 2778.858 kb on + strand, within A4249_RS13750at 2780.135 kb on + strand, within A4249_RS13760at 2780.135 kb on + strand, within A4249_RS13760at 2780.135 kb on + strand, within A4249_RS13760at 2780.135 kb on + strand, within A4249_RS13760at 2780.136 kb on - strand, within A4249_RS13760at 2780.136 kb on - strand, within A4249_RS13760at 2780.136 kb on - strand, within A4249_RS13760at 2780.268 kb on - strand, within A4249_RS13760at 2780.353 kb on + strandat 2780.353 kb on + strandat 2780.353 kb on + strandat 2780.353 kb on + strandat 2780.353 kb on + strandat 2780.353 kb on + strandat 2780.354 kb on - strandat 2780.354 kb on - strandat 2780.354 kb on - strandat 2780.361 kb on - strandat 2780.361 kb on - strandat 2780.374 kb on + strandat 2780.375 kb on - strandat 2780.375 kb on - strandat 2781.112 kb on + strandat 2781.112 kb on + strandat 2781.113 kb on - strandat 2781.192 kb on + strand, within A4249_RS13770at 2781.192 kb on + strand, within A4249_RS13770at 2781.192 kb on + strand, within A4249_RS13770at 2781.192 kb on + strand, within A4249_RS13770at 2781.193 kb on - strand, within A4249_RS13770at 2781.193 kb on - strand, within A4249_RS13770at 2781.251 kb on + strand, within A4249_RS13770at 2781.252 kb on - strand, within A4249_RS13770at 2781.354 kb on + strand, within A4249_RS13770at 2781.354 kb on + strand, within A4249_RS13770at 2781.354 kb on + strand, within A4249_RS13770at 2781.354 kb on + strand, within A4249_RS13770at 2781.354 kb on + strand, within A4249_RS13770at 2781.354 kb on + strand, within A4249_RS13770at 2781.354 kb on + strand, within A4249_RS13770at 2781.355 kb on - strand, within A4249_RS13770at 2781.355 kb on - strand, within A4249_RS13770at 2781.355 kb on - strand, within A4249_RS13770at 2781.355 kb on - strand, within A4249_RS13770

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,778,855 + A4249_RS13750 0.64 +0.3
2,778,855 + A4249_RS13750 0.64 -1.0
2,778,856 - A4249_RS13750 0.64 -0.1
2,778,856 - A4249_RS13750 0.64 -0.2
2,778,858 + A4249_RS13750 0.65 -0.4
2,780,135 + A4249_RS13760 0.68 -0.4
2,780,135 + A4249_RS13760 0.68 -0.7
2,780,135 + A4249_RS13760 0.68 +0.9
2,780,135 + A4249_RS13760 0.68 +0.4
2,780,136 - A4249_RS13760 0.68 -1.0
2,780,136 - A4249_RS13760 0.68 +0.8
2,780,136 - A4249_RS13760 0.68 -0.7
2,780,268 - A4249_RS13760 0.87 -0.2
2,780,353 + -0.5
2,780,353 + -0.2
2,780,353 + +0.4
2,780,353 + +0.8
2,780,353 + +1.3
2,780,353 + -0.4
2,780,354 - +0.1
2,780,354 - -0.2
2,780,354 - +0.1
2,780,361 - +0.3
2,780,361 - +0.9
2,780,374 + +0.4
2,780,375 - +0.7
2,780,375 - +1.0
2,781,112 + +0.8
2,781,112 + -0.9
2,781,113 - -1.9
2,781,192 + A4249_RS13770 0.12 -0.1
2,781,192 + A4249_RS13770 0.12 -0.4
2,781,192 + A4249_RS13770 0.12 -0.0
2,781,192 + A4249_RS13770 0.12 +0.6
2,781,193 - A4249_RS13770 0.12 +0.0
2,781,193 - A4249_RS13770 0.12 -0.4
2,781,251 + A4249_RS13770 0.22 -0.8
2,781,252 - A4249_RS13770 0.22 +1.0
2,781,354 + A4249_RS13770 0.39 +0.5
2,781,354 + A4249_RS13770 0.39 -0.1
2,781,354 + A4249_RS13770 0.39 +0.8
2,781,354 + A4249_RS13770 0.39 +0.1
2,781,354 + A4249_RS13770 0.39 -0.4
2,781,354 + A4249_RS13770 0.39 -0.5
2,781,354 + A4249_RS13770 0.39 +0.3
2,781,355 - A4249_RS13770 0.39 -0.3
2,781,355 - A4249_RS13770 0.39 +0.4
2,781,355 - A4249_RS13770 0.39 +0.1
2,781,355 - A4249_RS13770 0.39 -0.6

Or see this region's nucleotide sequence