Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS12930 and A4249_RS12935 are separated by 56 nucleotides A4249_RS12935 and A4249_RS16370 are separated by 79 nucleotides A4249_RS16370 and A4249_RS12940 are separated by 3 nucleotides A4249_RS12940 and A4249_RS12945 are separated by 99 nucleotides A4249_RS12945 and A4249_RS12950 are separated by 153 nucleotides
A4249_RS12930: A4249_RS12930 - HAD-IA family hydrolase, at 2,592,939 to 2,593,598
_RS12930
A4249_RS12935: A4249_RS12935 - iron-sulfur cluster assembly scaffold protein, at 2,593,655 to 2,594,110
_RS12935
A4249_RS16370: A4249_RS16370 - membrane protein insertion efficiency factor YidD, at 2,594,190 to 2,594,420
_RS16370
A4249_RS12940: A4249_RS12940 - threonine--tRNA ligase, at 2,594,424 to 2,596,352
_RS12940
A4249_RS12945: A4249_RS12945 - ferritin-like domain-containing protein, at 2,596,452 to 2,596,952
_RS12945
A4249_RS12950: A4249_RS12950 - ATP-binding protein, at 2,597,106 to 2,598,443
_RS12950
Position (kb)
2594
2595
2596
2597 Strain fitness (log2 ratio)
-1
0
1
2 at 2593.542 kb on + strand at 2593.542 kb on + strand at 2593.596 kb on + strand at 2593.597 kb on - strand at 2593.597 kb on - strand at 2593.643 kb on + strand at 2593.643 kb on + strand at 2593.644 kb on - strand at 2593.644 kb on - strand at 2593.644 kb on - strand at 2593.644 kb on - strand at 2594.149 kb on + strand at 2594.149 kb on + strand at 2594.199 kb on + strand at 2594.199 kb on + strand at 2594.199 kb on + strand at 2594.200 kb on - strand at 2594.411 kb on + strand at 2594.412 kb on - strand at 2594.412 kb on - strand at 2596.378 kb on + strand at 2596.378 kb on + strand at 2596.378 kb on + strand at 2596.378 kb on + strand at 2596.379 kb on - strand at 2596.379 kb on - strand at 2596.379 kb on - strand at 2596.387 kb on + strand at 2596.503 kb on + strand, within A4249_RS12945 at 2596.503 kb on + strand, within A4249_RS12945 at 2596.503 kb on + strand, within A4249_RS12945 at 2596.503 kb on + strand, within A4249_RS12945 at 2596.503 kb on + strand, within A4249_RS12945 at 2596.503 kb on + strand, within A4249_RS12945 at 2596.503 kb on + strand, within A4249_RS12945 at 2596.503 kb on + strand, within A4249_RS12945 at 2596.503 kb on + strand, within A4249_RS12945 at 2596.503 kb on + strand, within A4249_RS12945 at 2596.503 kb on + strand, within A4249_RS12945 at 2596.503 kb on + strand, within A4249_RS12945 at 2596.503 kb on + strand, within A4249_RS12945 at 2596.503 kb on + strand, within A4249_RS12945 at 2596.503 kb on + strand, within A4249_RS12945 at 2596.503 kb on + strand, within A4249_RS12945 at 2596.504 kb on - strand, within A4249_RS12945 at 2596.504 kb on - strand, within A4249_RS12945 at 2596.504 kb on - strand, within A4249_RS12945 at 2596.504 kb on - strand, within A4249_RS12945 at 2596.504 kb on - strand, within A4249_RS12945 at 2596.504 kb on - strand, within A4249_RS12945 at 2596.504 kb on - strand, within A4249_RS12945 at 2596.504 kb on - strand, within A4249_RS12945 at 2596.504 kb on - strand, within A4249_RS12945 at 2596.504 kb on - strand, within A4249_RS12945 at 2596.504 kb on - strand, within A4249_RS12945 at 2596.504 kb on - strand, within A4249_RS12945 at 2596.504 kb on - strand, within A4249_RS12945 at 2596.504 kb on - strand, within A4249_RS12945 at 2596.504 kb on - strand, within A4249_RS12945 at 2596.504 kb on - strand, within A4249_RS12945 at 2596.504 kb on - strand, within A4249_RS12945 at 2596.504 kb on - strand, within A4249_RS12945 at 2596.504 kb on - strand, within A4249_RS12945 at 2596.506 kb on + strand, within A4249_RS12945 at 2596.506 kb on + strand, within A4249_RS12945 at 2596.506 kb on + strand, within A4249_RS12945 at 2596.507 kb on - strand, within A4249_RS12945 at 2596.582 kb on + strand, within A4249_RS12945 at 2596.582 kb on + strand, within A4249_RS12945 at 2596.583 kb on - strand, within A4249_RS12945 at 2596.583 kb on - strand, within A4249_RS12945 at 2596.592 kb on + strand, within A4249_RS12945 at 2596.592 kb on + strand, within A4249_RS12945 at 2596.592 kb on + strand, within A4249_RS12945 at 2596.592 kb on + strand, within A4249_RS12945 at 2596.593 kb on - strand, within A4249_RS12945 at 2596.593 kb on - strand, within A4249_RS12945 at 2596.593 kb on - strand, within A4249_RS12945 at 2596.593 kb on - strand, within A4249_RS12945 at 2596.593 kb on - strand, within A4249_RS12945 at 2596.593 kb on - strand, within A4249_RS12945 at 2596.593 kb on - strand, within A4249_RS12945 at 2596.593 kb on - strand, within A4249_RS12945 at 2596.593 kb on - strand, within A4249_RS12945 at 2596.722 kb on + strand, within A4249_RS12945 at 2596.722 kb on + strand, within A4249_RS12945 at 2596.722 kb on + strand, within A4249_RS12945 at 2596.722 kb on + strand, within A4249_RS12945 at 2596.722 kb on + strand, within A4249_RS12945 at 2596.722 kb on + strand, within A4249_RS12945 at 2596.722 kb on + strand, within A4249_RS12945 at 2596.722 kb on + strand, within A4249_RS12945 at 2596.722 kb on + strand, within A4249_RS12945 at 2596.722 kb on + strand, within A4249_RS12945 at 2596.723 kb on - strand, within A4249_RS12945 at 2596.723 kb on - strand, within A4249_RS12945 at 2596.723 kb on - strand, within A4249_RS12945 at 2596.723 kb on - strand, within A4249_RS12945 at 2596.782 kb on + strand, within A4249_RS12945 at 2596.782 kb on + strand, within A4249_RS12945 at 2596.782 kb on + strand, within A4249_RS12945 at 2596.782 kb on + strand, within A4249_RS12945 at 2596.782 kb on + strand, within A4249_RS12945 at 2596.782 kb on + strand, within A4249_RS12945 at 2596.783 kb on - strand, within A4249_RS12945 at 2596.783 kb on - strand, within A4249_RS12945 at 2596.783 kb on - strand, within A4249_RS12945 at 2596.783 kb on - strand, within A4249_RS12945 at 2596.783 kb on - strand, within A4249_RS12945 at 2596.783 kb on - strand, within A4249_RS12945 at 2596.783 kb on - strand, within A4249_RS12945 at 2596.953 kb on + strand at 2596.954 kb on - strand at 2596.954 kb on - strand at 2597.042 kb on + strand at 2597.052 kb on - strand at 2597.052 kb on - strand at 2597.059 kb on + strand at 2597.060 kb on - strand at 2597.168 kb on + strand at 2597.169 kb on - strand at 2597.169 kb on - strand at 2597.169 kb on - strand at 2597.169 kb on - strand at 2597.169 kb on - strand at 2597.175 kb on + strand at 2597.176 kb on - strand at 2597.210 kb on + strand at 2597.210 kb on + strand at 2597.299 kb on + strand, within A4249_RS12950 at 2597.300 kb on - strand, within A4249_RS12950
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,593,542 + +0.0 2,593,542 + -0.3 2,593,596 + -0.0 2,593,597 - -0.8 2,593,597 - +0.3 2,593,643 + +0.2 2,593,643 + +0.1 2,593,644 - -1.3 2,593,644 - +1.6 2,593,644 - -0.1 2,593,644 - -0.8 2,594,149 + -0.2 2,594,149 + -1.5 2,594,199 + +0.8 2,594,199 + +2.5 2,594,199 + +0.1 2,594,200 - -1.0 2,594,411 + +0.3 2,594,412 - +1.4 2,594,412 - +0.5 2,596,378 + -1.7 2,596,378 + +1.4 2,596,378 + +0.9 2,596,378 + +0.8 2,596,379 - -0.0 2,596,379 - -0.3 2,596,379 - +0.6 2,596,387 + -0.4 2,596,503 + A4249_RS12945 0.10 +0.2 2,596,503 + A4249_RS12945 0.10 -0.1 2,596,503 + A4249_RS12945 0.10 +0.3 2,596,503 + A4249_RS12945 0.10 +0.4 2,596,503 + A4249_RS12945 0.10 -0.1 2,596,503 + A4249_RS12945 0.10 +0.2 2,596,503 + A4249_RS12945 0.10 -0.6 2,596,503 + A4249_RS12945 0.10 +0.0 2,596,503 + A4249_RS12945 0.10 -0.0 2,596,503 + A4249_RS12945 0.10 -0.6 2,596,503 + A4249_RS12945 0.10 +0.3 2,596,503 + A4249_RS12945 0.10 -0.3 2,596,503 + A4249_RS12945 0.10 -0.2 2,596,503 + A4249_RS12945 0.10 +0.5 2,596,503 + A4249_RS12945 0.10 +0.0 2,596,503 + A4249_RS12945 0.10 +0.5 2,596,504 - A4249_RS12945 0.10 -0.5 2,596,504 - A4249_RS12945 0.10 -0.2 2,596,504 - A4249_RS12945 0.10 -0.3 2,596,504 - A4249_RS12945 0.10 -0.1 2,596,504 - A4249_RS12945 0.10 -1.4 2,596,504 - A4249_RS12945 0.10 +0.2 2,596,504 - A4249_RS12945 0.10 +0.3 2,596,504 - A4249_RS12945 0.10 -0.5 2,596,504 - A4249_RS12945 0.10 -0.1 2,596,504 - A4249_RS12945 0.10 +0.4 2,596,504 - A4249_RS12945 0.10 -0.2 2,596,504 - A4249_RS12945 0.10 +0.0 2,596,504 - A4249_RS12945 0.10 -0.7 2,596,504 - A4249_RS12945 0.10 +1.4 2,596,504 - A4249_RS12945 0.10 -0.1 2,596,504 - A4249_RS12945 0.10 -0.2 2,596,504 - A4249_RS12945 0.10 -0.5 2,596,504 - A4249_RS12945 0.10 -1.4 2,596,504 - A4249_RS12945 0.10 -0.2 2,596,506 + A4249_RS12945 0.11 -1.7 2,596,506 + A4249_RS12945 0.11 -0.5 2,596,506 + A4249_RS12945 0.11 +0.3 2,596,507 - A4249_RS12945 0.11 -0.6 2,596,582 + A4249_RS12945 0.26 +0.1 2,596,582 + A4249_RS12945 0.26 +1.4 2,596,583 - A4249_RS12945 0.26 -0.6 2,596,583 - A4249_RS12945 0.26 +1.2 2,596,592 + A4249_RS12945 0.28 +0.6 2,596,592 + A4249_RS12945 0.28 -0.8 2,596,592 + A4249_RS12945 0.28 -0.1 2,596,592 + A4249_RS12945 0.28 -0.1 2,596,593 - A4249_RS12945 0.28 +0.5 2,596,593 - A4249_RS12945 0.28 +0.6 2,596,593 - A4249_RS12945 0.28 +0.5 2,596,593 - A4249_RS12945 0.28 -0.7 2,596,593 - A4249_RS12945 0.28 +0.2 2,596,593 - A4249_RS12945 0.28 -0.5 2,596,593 - A4249_RS12945 0.28 +0.4 2,596,593 - A4249_RS12945 0.28 +0.1 2,596,593 - A4249_RS12945 0.28 -0.1 2,596,722 + A4249_RS12945 0.54 -1.0 2,596,722 + A4249_RS12945 0.54 -1.0 2,596,722 + A4249_RS12945 0.54 -0.4 2,596,722 + A4249_RS12945 0.54 -1.2 2,596,722 + A4249_RS12945 0.54 +1.4 2,596,722 + A4249_RS12945 0.54 -0.1 2,596,722 + A4249_RS12945 0.54 -0.3 2,596,722 + A4249_RS12945 0.54 +0.2 2,596,722 + A4249_RS12945 0.54 -0.7 2,596,722 + A4249_RS12945 0.54 -1.5 2,596,723 - A4249_RS12945 0.54 -0.6 2,596,723 - A4249_RS12945 0.54 -0.1 2,596,723 - A4249_RS12945 0.54 +0.5 2,596,723 - A4249_RS12945 0.54 -0.2 2,596,782 + A4249_RS12945 0.66 +0.3 2,596,782 + A4249_RS12945 0.66 +0.6 2,596,782 + A4249_RS12945 0.66 +0.0 2,596,782 + A4249_RS12945 0.66 -1.2 2,596,782 + A4249_RS12945 0.66 +0.2 2,596,782 + A4249_RS12945 0.66 -0.5 2,596,783 - A4249_RS12945 0.66 -0.4 2,596,783 - A4249_RS12945 0.66 +0.0 2,596,783 - A4249_RS12945 0.66 -0.3 2,596,783 - A4249_RS12945 0.66 +1.0 2,596,783 - A4249_RS12945 0.66 -1.4 2,596,783 - A4249_RS12945 0.66 +0.1 2,596,783 - A4249_RS12945 0.66 -0.4 2,596,953 + +1.2 2,596,954 - -0.6 2,596,954 - -0.2 2,597,042 + -0.1 2,597,052 - -0.1 2,597,052 - -0.2 2,597,059 + +0.2 2,597,060 - +1.4 2,597,168 + +0.4 2,597,169 - +0.4 2,597,169 - +1.4 2,597,169 - -0.2 2,597,169 - +0.5 2,597,169 - -0.3 2,597,175 + -0.4 2,597,176 - +0.7 2,597,210 + -0.2 2,597,210 + +0.3 2,597,299 + A4249_RS12950 0.14 +0.8 2,597,300 - A4249_RS12950 0.14 -0.7
Or see this region's nucleotide sequence