Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS12780 and A4249_RS12785 are separated by 39 nucleotides A4249_RS12785 and A4249_RS12790 are separated by 4 nucleotides A4249_RS12790 and A4249_RS12795 overlap by 4 nucleotides A4249_RS12795 and A4249_RS12800 are separated by 45 nucleotides A4249_RS12800 and A4249_RS12805 are separated by 0 nucleotides
A4249_RS12780: A4249_RS12780 - heme exporter protein CcmB, at 2,566,368 to 2,567,078
_RS12780
A4249_RS12785: A4249_RS12785 - heme ABC transporter permease, at 2,567,118 to 2,567,837
_RS12785
A4249_RS12790: A4249_RS12790 - heme exporter protein CcmD, at 2,567,842 to 2,568,060
_RS12790
A4249_RS12795: A4249_RS12795 - DsbE family thiol:disulfide interchange protein, at 2,568,057 to 2,568,617
_RS12795
A4249_RS12800: A4249_RS12800 - hypothetical protein, at 2,568,663 to 2,568,941
_RS12800
A4249_RS12805: A4249_RS12805 - M48 family metallopeptidase, at 2,568,942 to 2,569,697
_RS12805
Position (kb)
2568
2569 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2567.104 kb on + strand at 2567.105 kb on - strand at 2567.866 kb on + strand, within A4249_RS12790 at 2568.044 kb on + strand at 2568.044 kb on + strand at 2568.544 kb on + strand, within A4249_RS12795 at 2568.545 kb on - strand, within A4249_RS12795 at 2568.921 kb on + strand at 2568.965 kb on + strand at 2568.965 kb on + strand at 2568.965 kb on + strand at 2568.965 kb on + strand at 2568.966 kb on - strand at 2568.966 kb on - strand at 2568.966 kb on - strand at 2568.966 kb on - strand at 2568.966 kb on - strand at 2568.967 kb on + strand at 2568.967 kb on + strand at 2568.967 kb on + strand at 2568.967 kb on + strand at 2568.968 kb on - strand at 2568.968 kb on - strand at 2568.968 kb on - strand at 2568.968 kb on - strand at 2568.968 kb on - strand at 2568.968 kb on - strand at 2568.968 kb on - strand at 2569.052 kb on + strand, within A4249_RS12805 at 2569.052 kb on + strand, within A4249_RS12805 at 2569.052 kb on + strand, within A4249_RS12805 at 2569.052 kb on + strand, within A4249_RS12805 at 2569.053 kb on - strand, within A4249_RS12805 at 2569.053 kb on - strand, within A4249_RS12805 at 2569.103 kb on + strand, within A4249_RS12805 at 2569.103 kb on + strand, within A4249_RS12805 at 2569.103 kb on + strand, within A4249_RS12805 at 2569.103 kb on + strand, within A4249_RS12805 at 2569.104 kb on - strand, within A4249_RS12805 at 2569.104 kb on - strand, within A4249_RS12805 at 2569.104 kb on - strand, within A4249_RS12805 at 2569.104 kb on - strand, within A4249_RS12805 at 2569.104 kb on - strand, within A4249_RS12805 at 2569.105 kb on + strand, within A4249_RS12805 at 2569.105 kb on + strand, within A4249_RS12805 at 2569.105 kb on + strand, within A4249_RS12805 at 2569.105 kb on + strand, within A4249_RS12805 at 2569.105 kb on + strand, within A4249_RS12805 at 2569.105 kb on + strand, within A4249_RS12805 at 2569.105 kb on + strand, within A4249_RS12805 at 2569.105 kb on + strand, within A4249_RS12805 at 2569.106 kb on - strand, within A4249_RS12805 at 2569.106 kb on - strand, within A4249_RS12805 at 2569.106 kb on - strand, within A4249_RS12805 at 2569.106 kb on - strand, within A4249_RS12805 at 2569.106 kb on - strand, within A4249_RS12805 at 2569.106 kb on - strand, within A4249_RS12805 at 2569.106 kb on - strand, within A4249_RS12805 at 2569.106 kb on - strand, within A4249_RS12805 at 2569.106 kb on - strand, within A4249_RS12805 at 2569.106 kb on - strand, within A4249_RS12805 at 2569.106 kb on - strand, within A4249_RS12805 at 2569.106 kb on - strand, within A4249_RS12805 at 2569.106 kb on - strand, within A4249_RS12805 at 2569.106 kb on - strand, within A4249_RS12805 at 2569.189 kb on + strand, within A4249_RS12805 at 2569.190 kb on - strand, within A4249_RS12805 at 2569.190 kb on - strand, within A4249_RS12805 at 2569.210 kb on + strand, within A4249_RS12805 at 2569.348 kb on - strand, within A4249_RS12805 at 2569.432 kb on + strand, within A4249_RS12805 at 2569.432 kb on + strand, within A4249_RS12805 at 2569.433 kb on - strand, within A4249_RS12805 at 2569.433 kb on - strand, within A4249_RS12805 at 2569.433 kb on - strand, within A4249_RS12805 at 2569.433 kb on - strand, within A4249_RS12805 at 2569.433 kb on - strand, within A4249_RS12805 at 2569.433 kb on - strand, within A4249_RS12805 at 2569.433 kb on - strand, within A4249_RS12805 at 2569.433 kb on - strand, within A4249_RS12805 at 2569.590 kb on + strand, within A4249_RS12805 at 2569.591 kb on - strand, within A4249_RS12805
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,567,104 + +0.3 2,567,105 - +0.3 2,567,866 + A4249_RS12790 0.11 +3.2 2,568,044 + +0.5 2,568,044 + +0.8 2,568,544 + A4249_RS12795 0.87 -0.6 2,568,545 - A4249_RS12795 0.87 -0.5 2,568,921 + +0.3 2,568,965 + +0.4 2,568,965 + +0.3 2,568,965 + +0.3 2,568,965 + +0.3 2,568,966 - -1.6 2,568,966 - -0.1 2,568,966 - -0.6 2,568,966 - -0.9 2,568,966 - +0.6 2,568,967 + -0.6 2,568,967 + -0.3 2,568,967 + -0.0 2,568,967 + +0.6 2,568,968 - +0.0 2,568,968 - +0.5 2,568,968 - +0.6 2,568,968 - +0.2 2,568,968 - +0.2 2,568,968 - -0.4 2,568,968 - -0.1 2,569,052 + A4249_RS12805 0.15 +0.0 2,569,052 + A4249_RS12805 0.15 +0.7 2,569,052 + A4249_RS12805 0.15 -0.1 2,569,052 + A4249_RS12805 0.15 +0.2 2,569,053 - A4249_RS12805 0.15 +0.2 2,569,053 - A4249_RS12805 0.15 -1.0 2,569,103 + A4249_RS12805 0.21 +0.2 2,569,103 + A4249_RS12805 0.21 +0.0 2,569,103 + A4249_RS12805 0.21 +0.9 2,569,103 + A4249_RS12805 0.21 +0.4 2,569,104 - A4249_RS12805 0.21 +0.0 2,569,104 - A4249_RS12805 0.21 -0.1 2,569,104 - A4249_RS12805 0.21 +1.1 2,569,104 - A4249_RS12805 0.21 +0.6 2,569,104 - A4249_RS12805 0.21 -0.0 2,569,105 + A4249_RS12805 0.22 -1.0 2,569,105 + A4249_RS12805 0.22 +1.6 2,569,105 + A4249_RS12805 0.22 -0.3 2,569,105 + A4249_RS12805 0.22 +0.7 2,569,105 + A4249_RS12805 0.22 -0.4 2,569,105 + A4249_RS12805 0.22 -1.0 2,569,105 + A4249_RS12805 0.22 -0.8 2,569,105 + A4249_RS12805 0.22 +0.2 2,569,106 - A4249_RS12805 0.22 +0.1 2,569,106 - A4249_RS12805 0.22 +0.6 2,569,106 - A4249_RS12805 0.22 +0.5 2,569,106 - A4249_RS12805 0.22 +0.3 2,569,106 - A4249_RS12805 0.22 -0.6 2,569,106 - A4249_RS12805 0.22 +0.3 2,569,106 - A4249_RS12805 0.22 +0.2 2,569,106 - A4249_RS12805 0.22 -0.2 2,569,106 - A4249_RS12805 0.22 -0.4 2,569,106 - A4249_RS12805 0.22 -0.3 2,569,106 - A4249_RS12805 0.22 -0.6 2,569,106 - A4249_RS12805 0.22 +1.3 2,569,106 - A4249_RS12805 0.22 -2.7 2,569,106 - A4249_RS12805 0.22 -0.5 2,569,189 + A4249_RS12805 0.33 -0.2 2,569,190 - A4249_RS12805 0.33 +0.3 2,569,190 - A4249_RS12805 0.33 +0.1 2,569,210 + A4249_RS12805 0.35 +0.2 2,569,348 - A4249_RS12805 0.54 +0.0 2,569,432 + A4249_RS12805 0.65 +0.2 2,569,432 + A4249_RS12805 0.65 +0.6 2,569,433 - A4249_RS12805 0.65 +0.0 2,569,433 - A4249_RS12805 0.65 +0.8 2,569,433 - A4249_RS12805 0.65 +0.2 2,569,433 - A4249_RS12805 0.65 -0.4 2,569,433 - A4249_RS12805 0.65 -1.0 2,569,433 - A4249_RS12805 0.65 +0.0 2,569,433 - A4249_RS12805 0.65 +0.3 2,569,433 - A4249_RS12805 0.65 -0.3 2,569,590 + A4249_RS12805 0.86 -1.2 2,569,591 - A4249_RS12805 0.86 -0.2
Or see this region's nucleotide sequence