Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS12740 and A4249_RS12745 are separated by 5 nucleotides A4249_RS12745 and A4249_RS12750 are separated by 68 nucleotides
A4249_RS12740: A4249_RS12740 - TerC family protein, at 2,555,953 to 2,556,780
_RS12740
A4249_RS12745: A4249_RS12745 - glutaminyl-peptide cyclotransferase, at 2,556,786 to 2,557,559
_RS12745
A4249_RS12750: A4249_RS12750 - catalase/peroxidase HPI, at 2,557,628 to 2,559,898
_RS12750
Position (kb)
2556
2557
2558 Strain fitness (log2 ratio)
-2
-1
0
1 at 2555.912 kb on - strand at 2555.966 kb on + strand at 2555.967 kb on - strand at 2556.596 kb on - strand, within A4249_RS12740 at 2556.613 kb on + strand, within A4249_RS12740 at 2556.613 kb on + strand, within A4249_RS12740 at 2556.613 kb on + strand, within A4249_RS12740 at 2556.613 kb on + strand, within A4249_RS12740 at 2556.613 kb on + strand, within A4249_RS12740 at 2556.614 kb on - strand, within A4249_RS12740 at 2556.619 kb on + strand, within A4249_RS12740 at 2556.619 kb on + strand, within A4249_RS12740 at 2556.619 kb on + strand, within A4249_RS12740 at 2556.619 kb on + strand, within A4249_RS12740 at 2556.619 kb on + strand, within A4249_RS12740 at 2556.619 kb on + strand, within A4249_RS12740 at 2556.619 kb on + strand, within A4249_RS12740 at 2556.619 kb on + strand, within A4249_RS12740 at 2556.619 kb on + strand, within A4249_RS12740 at 2556.619 kb on + strand, within A4249_RS12740 at 2556.619 kb on + strand, within A4249_RS12740 at 2556.620 kb on - strand, within A4249_RS12740 at 2556.620 kb on - strand, within A4249_RS12740 at 2556.620 kb on - strand, within A4249_RS12740 at 2556.620 kb on - strand, within A4249_RS12740 at 2556.620 kb on - strand, within A4249_RS12740 at 2556.620 kb on - strand, within A4249_RS12740 at 2556.620 kb on - strand, within A4249_RS12740 at 2556.620 kb on - strand, within A4249_RS12740 at 2556.620 kb on - strand, within A4249_RS12740 at 2556.885 kb on + strand, within A4249_RS12745 at 2556.886 kb on - strand, within A4249_RS12745 at 2556.960 kb on + strand, within A4249_RS12745 at 2556.960 kb on + strand, within A4249_RS12745 at 2556.960 kb on + strand, within A4249_RS12745 at 2556.960 kb on + strand, within A4249_RS12745 at 2556.960 kb on + strand, within A4249_RS12745 at 2556.960 kb on + strand, within A4249_RS12745 at 2556.961 kb on - strand, within A4249_RS12745 at 2556.979 kb on - strand, within A4249_RS12745 at 2556.995 kb on + strand, within A4249_RS12745 at 2556.996 kb on - strand, within A4249_RS12745 at 2556.996 kb on - strand, within A4249_RS12745 at 2557.050 kb on + strand, within A4249_RS12745 at 2557.050 kb on + strand, within A4249_RS12745 at 2557.051 kb on - strand, within A4249_RS12745 at 2557.051 kb on - strand, within A4249_RS12745 at 2557.051 kb on - strand, within A4249_RS12745 at 2557.051 kb on - strand, within A4249_RS12745 at 2557.089 kb on + strand, within A4249_RS12745 at 2557.089 kb on + strand, within A4249_RS12745 at 2557.089 kb on + strand, within A4249_RS12745 at 2557.090 kb on - strand, within A4249_RS12745 at 2557.165 kb on - strand, within A4249_RS12745 at 2557.722 kb on + strand at 2557.722 kb on + strand at 2557.722 kb on + strand at 2557.722 kb on + strand at 2557.722 kb on + strand at 2557.723 kb on - strand at 2557.723 kb on - strand at 2557.723 kb on - strand at 2557.946 kb on - strand, within A4249_RS12750
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,555,912 - +0.0 2,555,966 + +0.4 2,555,967 - -0.8 2,556,596 - A4249_RS12740 0.78 +0.6 2,556,613 + A4249_RS12740 0.80 +0.7 2,556,613 + A4249_RS12740 0.80 -0.1 2,556,613 + A4249_RS12740 0.80 +0.2 2,556,613 + A4249_RS12740 0.80 -0.3 2,556,613 + A4249_RS12740 0.80 -0.3 2,556,614 - A4249_RS12740 0.80 +0.0 2,556,619 + A4249_RS12740 0.80 +0.0 2,556,619 + A4249_RS12740 0.80 +0.5 2,556,619 + A4249_RS12740 0.80 -0.1 2,556,619 + A4249_RS12740 0.80 +1.0 2,556,619 + A4249_RS12740 0.80 +0.1 2,556,619 + A4249_RS12740 0.80 +0.6 2,556,619 + A4249_RS12740 0.80 -0.0 2,556,619 + A4249_RS12740 0.80 +0.2 2,556,619 + A4249_RS12740 0.80 -0.2 2,556,619 + A4249_RS12740 0.80 -1.1 2,556,619 + A4249_RS12740 0.80 +0.4 2,556,620 - A4249_RS12740 0.81 +0.7 2,556,620 - A4249_RS12740 0.81 +0.8 2,556,620 - A4249_RS12740 0.81 -0.2 2,556,620 - A4249_RS12740 0.81 +1.2 2,556,620 - A4249_RS12740 0.81 -0.2 2,556,620 - A4249_RS12740 0.81 +0.4 2,556,620 - A4249_RS12740 0.81 +0.3 2,556,620 - A4249_RS12740 0.81 +0.4 2,556,620 - A4249_RS12740 0.81 -0.5 2,556,885 + A4249_RS12745 0.13 +0.0 2,556,886 - A4249_RS12745 0.13 +0.9 2,556,960 + A4249_RS12745 0.22 -0.4 2,556,960 + A4249_RS12745 0.22 +0.4 2,556,960 + A4249_RS12745 0.22 -0.3 2,556,960 + A4249_RS12745 0.22 -0.2 2,556,960 + A4249_RS12745 0.22 -0.3 2,556,960 + A4249_RS12745 0.22 -0.1 2,556,961 - A4249_RS12745 0.23 +0.2 2,556,979 - A4249_RS12745 0.25 +0.4 2,556,995 + A4249_RS12745 0.27 +0.3 2,556,996 - A4249_RS12745 0.27 -0.4 2,556,996 - A4249_RS12745 0.27 +0.0 2,557,050 + A4249_RS12745 0.34 +0.2 2,557,050 + A4249_RS12745 0.34 -0.4 2,557,051 - A4249_RS12745 0.34 -1.2 2,557,051 - A4249_RS12745 0.34 -0.6 2,557,051 - A4249_RS12745 0.34 -0.2 2,557,051 - A4249_RS12745 0.34 -0.1 2,557,089 + A4249_RS12745 0.39 +0.3 2,557,089 + A4249_RS12745 0.39 +0.3 2,557,089 + A4249_RS12745 0.39 -0.4 2,557,090 - A4249_RS12745 0.39 -0.0 2,557,165 - A4249_RS12745 0.49 +0.4 2,557,722 + +0.4 2,557,722 + +0.2 2,557,722 + -1.8 2,557,722 + +1.0 2,557,722 + +0.3 2,557,723 - +0.8 2,557,723 - +0.3 2,557,723 - -0.0 2,557,946 - A4249_RS12750 0.14 +0.5
Or see this region's nucleotide sequence