Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS12690

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS12685 and A4249_RS12690 are separated by 142 nucleotidesA4249_RS12690 and A4249_RS12695 are separated by 136 nucleotides A4249_RS12685: A4249_RS12685 - cell division protein ZapE, at 2,543,766 to 2,544,857 _RS12685 A4249_RS12690: A4249_RS12690 - aspartate-semialdehyde dehydrogenase, at 2,545,000 to 2,546,046 _RS12690 A4249_RS12695: A4249_RS12695 - EamA family transporter RarD, at 2,546,183 to 2,547,109 _RS12695 Position (kb) 2544 2545 2546 2547Strain fitness (log2 ratio) -2 -1 0 1 2at 2544.697 kb on + strand, within A4249_RS12685at 2544.917 kb on + strandat 2544.917 kb on + strandat 2544.917 kb on + strandat 2544.917 kb on + strandat 2544.917 kb on + strandat 2544.917 kb on + strandat 2544.917 kb on + strandat 2544.917 kb on + strandat 2544.935 kb on + strandat 2544.936 kb on - strandat 2544.936 kb on - strandat 2544.936 kb on - strandat 2544.936 kb on - strandat 2544.936 kb on - strandat 2544.936 kb on - strandat 2544.936 kb on - strandat 2544.936 kb on - strandat 2544.936 kb on - strandat 2545.839 kb on + strand, within A4249_RS12690at 2545.877 kb on - strand, within A4249_RS12690at 2546.240 kb on + strandat 2546.240 kb on + strandat 2546.240 kb on + strandat 2546.240 kb on + strandat 2546.240 kb on + strandat 2546.240 kb on + strandat 2546.240 kb on + strandat 2546.241 kb on - strandat 2546.241 kb on - strandat 2546.241 kb on - strandat 2546.241 kb on - strandat 2546.241 kb on - strandat 2546.241 kb on - strandat 2546.465 kb on + strand, within A4249_RS12695at 2546.465 kb on + strand, within A4249_RS12695at 2546.465 kb on + strand, within A4249_RS12695at 2546.465 kb on + strand, within A4249_RS12695at 2546.465 kb on + strand, within A4249_RS12695at 2546.466 kb on - strand, within A4249_RS12695at 2546.466 kb on - strand, within A4249_RS12695at 2546.466 kb on - strand, within A4249_RS12695at 2546.466 kb on - strand, within A4249_RS12695at 2546.466 kb on - strand, within A4249_RS12695at 2546.466 kb on - strand, within A4249_RS12695at 2546.466 kb on - strand, within A4249_RS12695at 2546.513 kb on + strand, within A4249_RS12695at 2546.513 kb on + strand, within A4249_RS12695at 2546.513 kb on + strand, within A4249_RS12695at 2546.513 kb on + strand, within A4249_RS12695at 2546.514 kb on - strand, within A4249_RS12695at 2546.514 kb on - strand, within A4249_RS12695at 2546.516 kb on + strand, within A4249_RS12695at 2546.516 kb on + strand, within A4249_RS12695at 2546.516 kb on + strand, within A4249_RS12695at 2546.516 kb on + strand, within A4249_RS12695at 2546.516 kb on + strand, within A4249_RS12695at 2546.516 kb on + strand, within A4249_RS12695at 2546.516 kb on + strand, within A4249_RS12695at 2546.516 kb on + strand, within A4249_RS12695at 2546.516 kb on + strand, within A4249_RS12695at 2546.517 kb on - strand, within A4249_RS12695at 2546.517 kb on - strand, within A4249_RS12695at 2546.517 kb on - strand, within A4249_RS12695at 2546.517 kb on - strand, within A4249_RS12695at 2546.517 kb on - strand, within A4249_RS12695at 2546.517 kb on - strand, within A4249_RS12695at 2546.517 kb on - strand, within A4249_RS12695at 2546.517 kb on - strand, within A4249_RS12695at 2546.518 kb on + strand, within A4249_RS12695at 2546.518 kb on + strand, within A4249_RS12695at 2546.518 kb on + strand, within A4249_RS12695at 2546.518 kb on + strand, within A4249_RS12695at 2546.518 kb on + strand, within A4249_RS12695at 2546.518 kb on + strand, within A4249_RS12695at 2546.518 kb on + strand, within A4249_RS12695at 2546.518 kb on + strand, within A4249_RS12695at 2546.519 kb on - strand, within A4249_RS12695at 2546.519 kb on - strand, within A4249_RS12695at 2546.519 kb on - strand, within A4249_RS12695at 2546.519 kb on - strand, within A4249_RS12695at 2546.519 kb on - strand, within A4249_RS12695at 2546.519 kb on - strand, within A4249_RS12695at 2546.519 kb on - strand, within A4249_RS12695at 2546.519 kb on - strand, within A4249_RS12695at 2546.519 kb on - strand, within A4249_RS12695at 2546.519 kb on - strand, within A4249_RS12695at 2546.519 kb on - strand, within A4249_RS12695at 2546.519 kb on - strand, within A4249_RS12695at 2546.519 kb on - strand, within A4249_RS12695at 2546.519 kb on - strand, within A4249_RS12695at 2546.519 kb on - strand, within A4249_RS12695at 2546.519 kb on - strand, within A4249_RS12695at 2546.519 kb on - strand, within A4249_RS12695

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,544,697 + A4249_RS12685 0.85 +0.8
2,544,917 + -0.3
2,544,917 + -0.1
2,544,917 + +0.2
2,544,917 + -0.6
2,544,917 + +0.4
2,544,917 + +0.3
2,544,917 + +0.3
2,544,917 + +0.5
2,544,935 + -0.3
2,544,936 - -0.8
2,544,936 - -0.8
2,544,936 - -1.8
2,544,936 - -0.4
2,544,936 - -0.5
2,544,936 - -1.7
2,544,936 - -0.6
2,544,936 - +0.7
2,544,936 - -0.3
2,545,839 + A4249_RS12690 0.80 -0.2
2,545,877 - A4249_RS12690 0.84 -0.2
2,546,240 + +0.1
2,546,240 + -1.0
2,546,240 + -0.5
2,546,240 + +1.1
2,546,240 + +0.1
2,546,240 + +0.0
2,546,240 + +0.4
2,546,241 - +0.3
2,546,241 - -0.2
2,546,241 - -0.3
2,546,241 - +0.5
2,546,241 - -0.2
2,546,241 - +0.1
2,546,465 + A4249_RS12695 0.30 -0.3
2,546,465 + A4249_RS12695 0.30 -0.8
2,546,465 + A4249_RS12695 0.30 -0.5
2,546,465 + A4249_RS12695 0.30 -0.1
2,546,465 + A4249_RS12695 0.30 -0.8
2,546,466 - A4249_RS12695 0.31 +2.0
2,546,466 - A4249_RS12695 0.31 +0.6
2,546,466 - A4249_RS12695 0.31 -0.6
2,546,466 - A4249_RS12695 0.31 -1.4
2,546,466 - A4249_RS12695 0.31 -0.8
2,546,466 - A4249_RS12695 0.31 +0.3
2,546,466 - A4249_RS12695 0.31 -0.4
2,546,513 + A4249_RS12695 0.36 -0.8
2,546,513 + A4249_RS12695 0.36 -0.3
2,546,513 + A4249_RS12695 0.36 +0.2
2,546,513 + A4249_RS12695 0.36 +0.2
2,546,514 - A4249_RS12695 0.36 +0.0
2,546,514 - A4249_RS12695 0.36 +0.0
2,546,516 + A4249_RS12695 0.36 -1.0
2,546,516 + A4249_RS12695 0.36 -1.1
2,546,516 + A4249_RS12695 0.36 +0.0
2,546,516 + A4249_RS12695 0.36 +0.2
2,546,516 + A4249_RS12695 0.36 +0.5
2,546,516 + A4249_RS12695 0.36 +0.2
2,546,516 + A4249_RS12695 0.36 +0.5
2,546,516 + A4249_RS12695 0.36 +1.4
2,546,516 + A4249_RS12695 0.36 +0.1
2,546,517 - A4249_RS12695 0.36 -0.0
2,546,517 - A4249_RS12695 0.36 +0.1
2,546,517 - A4249_RS12695 0.36 +0.4
2,546,517 - A4249_RS12695 0.36 +0.3
2,546,517 - A4249_RS12695 0.36 -0.6
2,546,517 - A4249_RS12695 0.36 -0.4
2,546,517 - A4249_RS12695 0.36 +0.1
2,546,517 - A4249_RS12695 0.36 -0.5
2,546,518 + A4249_RS12695 0.36 -0.1
2,546,518 + A4249_RS12695 0.36 -1.3
2,546,518 + A4249_RS12695 0.36 -1.5
2,546,518 + A4249_RS12695 0.36 +0.7
2,546,518 + A4249_RS12695 0.36 -0.2
2,546,518 + A4249_RS12695 0.36 -0.0
2,546,518 + A4249_RS12695 0.36 +0.0
2,546,518 + A4249_RS12695 0.36 +0.2
2,546,519 - A4249_RS12695 0.36 +0.3
2,546,519 - A4249_RS12695 0.36 +0.2
2,546,519 - A4249_RS12695 0.36 +1.3
2,546,519 - A4249_RS12695 0.36 -1.3
2,546,519 - A4249_RS12695 0.36 -0.2
2,546,519 - A4249_RS12695 0.36 -1.2
2,546,519 - A4249_RS12695 0.36 -1.1
2,546,519 - A4249_RS12695 0.36 +0.4
2,546,519 - A4249_RS12695 0.36 +0.2
2,546,519 - A4249_RS12695 0.36 -2.3
2,546,519 - A4249_RS12695 0.36 -0.6
2,546,519 - A4249_RS12695 0.36 -1.6
2,546,519 - A4249_RS12695 0.36 +0.9
2,546,519 - A4249_RS12695 0.36 +0.2
2,546,519 - A4249_RS12695 0.36 +1.1
2,546,519 - A4249_RS12695 0.36 +0.3
2,546,519 - A4249_RS12695 0.36 +0.7

Or see this region's nucleotide sequence