Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS12495

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS12490 and A4249_RS12495 are separated by 271 nucleotidesA4249_RS12495 and A4249_RS12500 are separated by 49 nucleotidesA4249_RS12500 and A4249_RS12505 overlap by 1 nucleotides A4249_RS12490: A4249_RS12490 - methyltransferase domain-containing protein, at 2,503,719 to 2,504,525 _RS12490 A4249_RS12495: A4249_RS12495 - Hsp20 family protein, at 2,504,797 to 2,505,276 _RS12495 A4249_RS12500: A4249_RS12500 - RNA pyrophosphohydrolase, at 2,505,326 to 2,505,802 _RS12500 A4249_RS12505: A4249_RS12505 - divergent polysaccharide deacetylase family protein, at 2,505,802 to 2,506,992 _RS12505 Position (kb) 2504 2505 2506Strain fitness (log2 ratio) -1 0 1 2at 2503.954 kb on + strand, within A4249_RS12490at 2503.954 kb on + strand, within A4249_RS12490at 2503.954 kb on + strand, within A4249_RS12490at 2503.954 kb on + strand, within A4249_RS12490at 2503.955 kb on - strand, within A4249_RS12490at 2503.955 kb on - strand, within A4249_RS12490at 2503.955 kb on - strand, within A4249_RS12490at 2503.955 kb on - strand, within A4249_RS12490at 2503.955 kb on - strand, within A4249_RS12490at 2503.969 kb on + strand, within A4249_RS12490at 2503.969 kb on + strand, within A4249_RS12490at 2503.969 kb on + strand, within A4249_RS12490at 2503.969 kb on + strand, within A4249_RS12490at 2503.969 kb on + strand, within A4249_RS12490at 2503.969 kb on + strand, within A4249_RS12490at 2503.970 kb on - strand, within A4249_RS12490at 2503.970 kb on - strand, within A4249_RS12490at 2503.970 kb on - strand, within A4249_RS12490at 2504.075 kb on - strand, within A4249_RS12490at 2504.075 kb on - strand, within A4249_RS12490at 2504.188 kb on + strand, within A4249_RS12490at 2504.188 kb on + strand, within A4249_RS12490at 2504.188 kb on + strand, within A4249_RS12490at 2504.188 kb on + strand, within A4249_RS12490at 2504.188 kb on + strand, within A4249_RS12490at 2504.189 kb on - strand, within A4249_RS12490at 2504.189 kb on - strand, within A4249_RS12490at 2504.189 kb on - strand, within A4249_RS12490at 2504.212 kb on + strand, within A4249_RS12490at 2504.213 kb on - strand, within A4249_RS12490at 2504.213 kb on - strand, within A4249_RS12490at 2504.308 kb on + strand, within A4249_RS12490at 2504.309 kb on - strand, within A4249_RS12490at 2504.309 kb on - strand, within A4249_RS12490at 2504.309 kb on - strand, within A4249_RS12490at 2504.309 kb on - strand, within A4249_RS12490at 2504.320 kb on + strand, within A4249_RS12490at 2504.321 kb on - strand, within A4249_RS12490at 2504.321 kb on - strand, within A4249_RS12490at 2504.321 kb on - strand, within A4249_RS12490at 2504.321 kb on - strand, within A4249_RS12490at 2504.509 kb on + strandat 2504.510 kb on - strandat 2504.510 kb on - strandat 2504.559 kb on - strandat 2504.802 kb on + strandat 2504.802 kb on + strandat 2504.802 kb on + strandat 2504.802 kb on + strandat 2504.802 kb on + strandat 2504.802 kb on + strandat 2504.802 kb on + strandat 2504.802 kb on + strandat 2504.802 kb on + strandat 2504.803 kb on - strandat 2504.803 kb on - strandat 2504.803 kb on - strandat 2504.803 kb on - strandat 2504.803 kb on - strandat 2504.803 kb on - strandat 2504.803 kb on - strandat 2504.803 kb on - strandat 2504.806 kb on + strandat 2504.806 kb on + strandat 2504.806 kb on + strandat 2504.806 kb on + strandat 2504.806 kb on + strandat 2504.807 kb on - strandat 2504.807 kb on - strandat 2504.807 kb on - strandat 2504.807 kb on - strandat 2504.807 kb on - strandat 2504.807 kb on - strandat 2504.807 kb on - strandat 2504.807 kb on - strandat 2504.911 kb on + strand, within A4249_RS12495at 2504.911 kb on + strand, within A4249_RS12495at 2504.911 kb on + strand, within A4249_RS12495at 2504.911 kb on + strand, within A4249_RS12495at 2504.911 kb on + strand, within A4249_RS12495at 2504.911 kb on + strand, within A4249_RS12495at 2504.911 kb on + strand, within A4249_RS12495at 2504.911 kb on + strand, within A4249_RS12495at 2504.911 kb on + strand, within A4249_RS12495at 2504.912 kb on - strand, within A4249_RS12495at 2504.912 kb on - strand, within A4249_RS12495at 2504.912 kb on - strand, within A4249_RS12495at 2504.912 kb on - strand, within A4249_RS12495at 2504.912 kb on - strand, within A4249_RS12495at 2504.912 kb on - strand, within A4249_RS12495at 2505.064 kb on + strand, within A4249_RS12495at 2505.064 kb on + strand, within A4249_RS12495at 2505.064 kb on + strand, within A4249_RS12495at 2505.064 kb on + strand, within A4249_RS12495at 2505.064 kb on + strand, within A4249_RS12495at 2505.064 kb on + strand, within A4249_RS12495at 2505.064 kb on + strand, within A4249_RS12495at 2505.064 kb on + strand, within A4249_RS12495at 2505.064 kb on + strand, within A4249_RS12495at 2505.065 kb on - strand, within A4249_RS12495at 2505.065 kb on - strand, within A4249_RS12495at 2505.065 kb on - strand, within A4249_RS12495at 2505.065 kb on - strand, within A4249_RS12495at 2505.065 kb on - strand, within A4249_RS12495at 2505.065 kb on - strand, within A4249_RS12495at 2505.121 kb on + strand, within A4249_RS12495at 2505.121 kb on + strand, within A4249_RS12495at 2505.121 kb on + strand, within A4249_RS12495at 2505.121 kb on + strand, within A4249_RS12495at 2505.122 kb on - strand, within A4249_RS12495at 2505.122 kb on - strand, within A4249_RS12495at 2505.122 kb on - strand, within A4249_RS12495at 2505.122 kb on - strand, within A4249_RS12495at 2505.122 kb on - strand, within A4249_RS12495at 2505.122 kb on - strand, within A4249_RS12495at 2505.274 kb on + strandat 2505.274 kb on + strandat 2505.294 kb on + strandat 2505.294 kb on + strandat 2505.295 kb on - strandat 2505.295 kb on - strandat 2505.295 kb on - strandat 2505.803 kb on + strandat 2505.803 kb on + strandat 2505.905 kb on + strandat 2506.149 kb on - strand, within A4249_RS12505at 2506.149 kb on - strand, within A4249_RS12505at 2506.167 kb on - strand, within A4249_RS12505at 2506.239 kb on + strand, within A4249_RS12505at 2506.239 kb on + strand, within A4249_RS12505at 2506.239 kb on + strand, within A4249_RS12505at 2506.239 kb on + strand, within A4249_RS12505at 2506.239 kb on + strand, within A4249_RS12505at 2506.239 kb on + strand, within A4249_RS12505at 2506.239 kb on + strand, within A4249_RS12505at 2506.240 kb on - strand, within A4249_RS12505at 2506.240 kb on - strand, within A4249_RS12505at 2506.240 kb on - strand, within A4249_RS12505at 2506.240 kb on - strand, within A4249_RS12505at 2506.242 kb on - strand, within A4249_RS12505

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,503,954 + A4249_RS12490 0.29 +0.1
2,503,954 + A4249_RS12490 0.29 +0.6
2,503,954 + A4249_RS12490 0.29 +0.4
2,503,954 + A4249_RS12490 0.29 +0.2
2,503,955 - A4249_RS12490 0.29 -0.1
2,503,955 - A4249_RS12490 0.29 +0.1
2,503,955 - A4249_RS12490 0.29 +0.1
2,503,955 - A4249_RS12490 0.29 -0.1
2,503,955 - A4249_RS12490 0.29 -0.3
2,503,969 + A4249_RS12490 0.31 -0.1
2,503,969 + A4249_RS12490 0.31 +0.3
2,503,969 + A4249_RS12490 0.31 +0.3
2,503,969 + A4249_RS12490 0.31 +0.2
2,503,969 + A4249_RS12490 0.31 +0.6
2,503,969 + A4249_RS12490 0.31 +0.9
2,503,970 - A4249_RS12490 0.31 +0.7
2,503,970 - A4249_RS12490 0.31 -0.5
2,503,970 - A4249_RS12490 0.31 -0.8
2,504,075 - A4249_RS12490 0.44 +0.1
2,504,075 - A4249_RS12490 0.44 -0.1
2,504,188 + A4249_RS12490 0.58 +1.2
2,504,188 + A4249_RS12490 0.58 +0.6
2,504,188 + A4249_RS12490 0.58 -0.7
2,504,188 + A4249_RS12490 0.58 -0.2
2,504,188 + A4249_RS12490 0.58 -0.1
2,504,189 - A4249_RS12490 0.58 +0.7
2,504,189 - A4249_RS12490 0.58 +0.1
2,504,189 - A4249_RS12490 0.58 +0.2
2,504,212 + A4249_RS12490 0.61 -0.4
2,504,213 - A4249_RS12490 0.61 +0.2
2,504,213 - A4249_RS12490 0.61 -0.3
2,504,308 + A4249_RS12490 0.73 -0.8
2,504,309 - A4249_RS12490 0.73 -0.5
2,504,309 - A4249_RS12490 0.73 -0.2
2,504,309 - A4249_RS12490 0.73 +0.3
2,504,309 - A4249_RS12490 0.73 +0.4
2,504,320 + A4249_RS12490 0.74 +0.3
2,504,321 - A4249_RS12490 0.75 +0.0
2,504,321 - A4249_RS12490 0.75 +0.6
2,504,321 - A4249_RS12490 0.75 +0.9
2,504,321 - A4249_RS12490 0.75 -0.2
2,504,509 + -0.4
2,504,510 - -0.2
2,504,510 - -0.8
2,504,559 - -0.0
2,504,802 + +0.2
2,504,802 + -1.4
2,504,802 + +0.1
2,504,802 + -0.3
2,504,802 + -1.0
2,504,802 + -0.2
2,504,802 + +0.2
2,504,802 + -1.2
2,504,802 + -0.7
2,504,803 - -0.4
2,504,803 - +0.5
2,504,803 - +0.1
2,504,803 - +0.2
2,504,803 - +2.0
2,504,803 - +1.7
2,504,803 - +1.1
2,504,803 - +0.3
2,504,806 + -1.4
2,504,806 + -0.4
2,504,806 + -0.0
2,504,806 + +0.5
2,504,806 + -0.4
2,504,807 - +1.1
2,504,807 - +0.3
2,504,807 - -0.5
2,504,807 - +0.1
2,504,807 - -0.1
2,504,807 - -0.2
2,504,807 - -1.1
2,504,807 - -0.1
2,504,911 + A4249_RS12495 0.24 +0.3
2,504,911 + A4249_RS12495 0.24 +1.0
2,504,911 + A4249_RS12495 0.24 -1.1
2,504,911 + A4249_RS12495 0.24 -0.3
2,504,911 + A4249_RS12495 0.24 -1.4
2,504,911 + A4249_RS12495 0.24 +0.2
2,504,911 + A4249_RS12495 0.24 +0.6
2,504,911 + A4249_RS12495 0.24 +0.0
2,504,911 + A4249_RS12495 0.24 +0.0
2,504,912 - A4249_RS12495 0.24 -0.8
2,504,912 - A4249_RS12495 0.24 +0.1
2,504,912 - A4249_RS12495 0.24 +0.7
2,504,912 - A4249_RS12495 0.24 +0.1
2,504,912 - A4249_RS12495 0.24 +0.2
2,504,912 - A4249_RS12495 0.24 +1.2
2,505,064 + A4249_RS12495 0.56 +0.1
2,505,064 + A4249_RS12495 0.56 -0.5
2,505,064 + A4249_RS12495 0.56 +0.3
2,505,064 + A4249_RS12495 0.56 -1.7
2,505,064 + A4249_RS12495 0.56 +0.4
2,505,064 + A4249_RS12495 0.56 +0.4
2,505,064 + A4249_RS12495 0.56 +0.7
2,505,064 + A4249_RS12495 0.56 +0.4
2,505,064 + A4249_RS12495 0.56 +1.3
2,505,065 - A4249_RS12495 0.56 -0.2
2,505,065 - A4249_RS12495 0.56 -0.1
2,505,065 - A4249_RS12495 0.56 -1.0
2,505,065 - A4249_RS12495 0.56 -0.8
2,505,065 - A4249_RS12495 0.56 +0.6
2,505,065 - A4249_RS12495 0.56 +0.5
2,505,121 + A4249_RS12495 0.68 -0.6
2,505,121 + A4249_RS12495 0.68 -0.1
2,505,121 + A4249_RS12495 0.68 +0.2
2,505,121 + A4249_RS12495 0.68 +0.5
2,505,122 - A4249_RS12495 0.68 -0.2
2,505,122 - A4249_RS12495 0.68 +0.2
2,505,122 - A4249_RS12495 0.68 -0.3
2,505,122 - A4249_RS12495 0.68 -0.0
2,505,122 - A4249_RS12495 0.68 +0.4
2,505,122 - A4249_RS12495 0.68 -0.3
2,505,274 + +0.2
2,505,274 + +0.7
2,505,294 + -0.4
2,505,294 + +0.2
2,505,295 - -0.2
2,505,295 - +0.5
2,505,295 - +0.6
2,505,803 + -0.0
2,505,803 + -0.5
2,505,905 + -0.2
2,506,149 - A4249_RS12505 0.29 -0.6
2,506,149 - A4249_RS12505 0.29 -0.2
2,506,167 - A4249_RS12505 0.31 +0.9
2,506,239 + A4249_RS12505 0.37 +0.9
2,506,239 + A4249_RS12505 0.37 +0.2
2,506,239 + A4249_RS12505 0.37 -0.8
2,506,239 + A4249_RS12505 0.37 +0.8
2,506,239 + A4249_RS12505 0.37 -0.4
2,506,239 + A4249_RS12505 0.37 -0.3
2,506,239 + A4249_RS12505 0.37 -0.4
2,506,240 - A4249_RS12505 0.37 -0.3
2,506,240 - A4249_RS12505 0.37 -0.2
2,506,240 - A4249_RS12505 0.37 -0.2
2,506,240 - A4249_RS12505 0.37 +0.4
2,506,242 - A4249_RS12505 0.37 -0.5

Or see this region's nucleotide sequence