Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS12410 and A4249_RS12415 are separated by 156 nucleotides A4249_RS12415 and A4249_RS12420 are separated by 191 nucleotides A4249_RS12420 and A4249_RS12425 are separated by 66 nucleotides
A4249_RS12410: A4249_RS12410 - M13 family peptidase, at 2,488,233 to 2,490,356
_RS12410
A4249_RS12415: A4249_RS12415 - cation:proton antiporter, at 2,490,513 to 2,492,348
_RS12415
A4249_RS12420: A4249_RS12420 - TetR/AcrR family transcriptional regulator, at 2,492,540 to 2,493,181
_RS12420
A4249_RS12425: A4249_RS12425 - Smr/MutS family protein, at 2,493,248 to 2,493,829
_RS12425
Position (kb)
2490
2491
2492
2493 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2489.521 kb on + strand, within A4249_RS12410 at 2489.521 kb on + strand, within A4249_RS12410 at 2489.521 kb on + strand, within A4249_RS12410 at 2489.522 kb on - strand, within A4249_RS12410 at 2489.522 kb on - strand, within A4249_RS12410 at 2489.653 kb on + strand, within A4249_RS12410 at 2489.653 kb on + strand, within A4249_RS12410 at 2489.653 kb on + strand, within A4249_RS12410 at 2489.653 kb on + strand, within A4249_RS12410 at 2489.653 kb on + strand, within A4249_RS12410 at 2489.653 kb on + strand, within A4249_RS12410 at 2489.654 kb on - strand, within A4249_RS12410 at 2489.654 kb on - strand, within A4249_RS12410 at 2489.654 kb on - strand, within A4249_RS12410 at 2489.654 kb on - strand, within A4249_RS12410 at 2489.662 kb on + strand, within A4249_RS12410 at 2489.662 kb on + strand, within A4249_RS12410 at 2489.662 kb on + strand, within A4249_RS12410 at 2489.662 kb on + strand, within A4249_RS12410 at 2489.662 kb on + strand, within A4249_RS12410 at 2489.662 kb on + strand, within A4249_RS12410 at 2489.662 kb on + strand, within A4249_RS12410 at 2489.662 kb on + strand, within A4249_RS12410 at 2489.662 kb on + strand, within A4249_RS12410 at 2489.662 kb on + strand, within A4249_RS12410 at 2489.663 kb on - strand, within A4249_RS12410 at 2489.663 kb on - strand, within A4249_RS12410 at 2489.663 kb on - strand, within A4249_RS12410 at 2489.663 kb on - strand, within A4249_RS12410 at 2489.698 kb on + strand, within A4249_RS12410 at 2489.701 kb on + strand, within A4249_RS12410 at 2489.701 kb on + strand, within A4249_RS12410 at 2489.701 kb on + strand, within A4249_RS12410 at 2489.749 kb on + strand, within A4249_RS12410 at 2489.829 kb on - strand, within A4249_RS12410 at 2489.829 kb on - strand, within A4249_RS12410 at 2489.829 kb on - strand, within A4249_RS12410 at 2489.829 kb on - strand, within A4249_RS12410 at 2489.830 kb on + strand, within A4249_RS12410 at 2489.830 kb on + strand, within A4249_RS12410 at 2489.830 kb on + strand, within A4249_RS12410 at 2489.830 kb on + strand, within A4249_RS12410 at 2489.830 kb on + strand, within A4249_RS12410 at 2489.830 kb on + strand, within A4249_RS12410 at 2489.830 kb on + strand, within A4249_RS12410 at 2489.830 kb on + strand, within A4249_RS12410 at 2489.831 kb on - strand, within A4249_RS12410 at 2489.831 kb on - strand, within A4249_RS12410 at 2489.831 kb on - strand, within A4249_RS12410 at 2489.831 kb on - strand, within A4249_RS12410 at 2489.831 kb on - strand, within A4249_RS12410 at 2489.878 kb on + strand, within A4249_RS12410 at 2489.878 kb on + strand, within A4249_RS12410 at 2489.878 kb on + strand, within A4249_RS12410 at 2489.879 kb on - strand, within A4249_RS12410 at 2489.879 kb on - strand, within A4249_RS12410 at 2489.929 kb on + strand, within A4249_RS12410 at 2489.929 kb on + strand, within A4249_RS12410 at 2489.929 kb on + strand, within A4249_RS12410 at 2489.929 kb on + strand, within A4249_RS12410 at 2489.930 kb on - strand, within A4249_RS12410 at 2489.930 kb on - strand, within A4249_RS12410 at 2490.058 kb on + strand, within A4249_RS12410 at 2490.058 kb on + strand, within A4249_RS12410 at 2490.058 kb on + strand, within A4249_RS12410 at 2490.059 kb on - strand, within A4249_RS12410 at 2490.059 kb on - strand, within A4249_RS12410 at 2490.059 kb on - strand, within A4249_RS12410 at 2490.059 kb on - strand, within A4249_RS12410 at 2490.112 kb on + strand, within A4249_RS12410 at 2490.112 kb on + strand, within A4249_RS12410 at 2490.113 kb on - strand, within A4249_RS12410 at 2490.181 kb on + strand at 2490.360 kb on + strand at 2490.360 kb on + strand at 2490.360 kb on + strand at 2490.360 kb on + strand at 2490.360 kb on + strand at 2490.360 kb on + strand at 2490.360 kb on + strand at 2490.360 kb on + strand at 2490.360 kb on + strand at 2490.360 kb on + strand at 2490.360 kb on + strand at 2490.360 kb on + strand at 2490.361 kb on - strand at 2490.361 kb on - strand at 2490.361 kb on - strand at 2490.361 kb on - strand at 2490.361 kb on - strand at 2490.361 kb on - strand at 2490.361 kb on - strand at 2490.361 kb on - strand at 2490.361 kb on - strand at 2490.361 kb on - strand at 2490.361 kb on - strand at 2490.361 kb on - strand at 2490.361 kb on - strand at 2490.406 kb on + strand at 2490.406 kb on + strand at 2490.406 kb on + strand at 2490.406 kb on + strand at 2490.406 kb on + strand at 2490.407 kb on - strand at 2490.491 kb on + strand at 2490.491 kb on + strand at 2490.492 kb on - strand at 2490.492 kb on - strand at 2490.534 kb on + strand at 2490.534 kb on + strand at 2490.534 kb on + strand at 2490.535 kb on - strand at 2490.535 kb on - strand at 2490.535 kb on - strand at 2490.535 kb on - strand at 2490.536 kb on + strand at 2490.536 kb on + strand at 2490.536 kb on + strand at 2490.536 kb on + strand at 2490.536 kb on + strand at 2490.536 kb on + strand at 2490.536 kb on + strand at 2490.537 kb on - strand at 2490.537 kb on - strand at 2490.537 kb on - strand at 2490.537 kb on - strand at 2491.899 kb on - strand, within A4249_RS12415 at 2491.929 kb on + strand, within A4249_RS12415 at 2491.929 kb on + strand, within A4249_RS12415 at 2491.929 kb on + strand, within A4249_RS12415 at 2491.929 kb on + strand, within A4249_RS12415 at 2491.929 kb on + strand, within A4249_RS12415 at 2491.930 kb on - strand, within A4249_RS12415 at 2491.930 kb on - strand, within A4249_RS12415 at 2491.930 kb on - strand, within A4249_RS12415 at 2491.930 kb on - strand, within A4249_RS12415 at 2491.930 kb on - strand, within A4249_RS12415 at 2491.930 kb on - strand, within A4249_RS12415 at 2491.930 kb on - strand, within A4249_RS12415 at 2492.109 kb on + strand, within A4249_RS12415 at 2492.109 kb on + strand, within A4249_RS12415 at 2492.109 kb on + strand, within A4249_RS12415 at 2492.109 kb on + strand, within A4249_RS12415 at 2492.110 kb on - strand, within A4249_RS12415 at 2492.110 kb on - strand, within A4249_RS12415 at 2492.110 kb on - strand, within A4249_RS12415 at 2492.314 kb on + strand at 2492.314 kb on + strand at 2492.346 kb on + strand at 2492.347 kb on - strand at 2492.360 kb on + strand at 2492.360 kb on + strand at 2492.360 kb on + strand at 2492.361 kb on - strand at 2492.361 kb on - strand at 2492.472 kb on + strand at 2492.472 kb on + strand at 2492.473 kb on - strand at 2492.473 kb on - strand at 2492.473 kb on - strand at 2492.521 kb on - strand at 2492.537 kb on + strand at 2492.537 kb on + strand at 2492.538 kb on - strand at 2492.539 kb on + strand at 2492.539 kb on + strand at 2492.539 kb on + strand at 2492.539 kb on + strand at 2492.540 kb on - strand at 2492.548 kb on + strand at 2492.549 kb on - strand at 2492.660 kb on + strand, within A4249_RS12420 at 2492.661 kb on - strand, within A4249_RS12420 at 2492.661 kb on - strand, within A4249_RS12420 at 2492.773 kb on + strand, within A4249_RS12420 at 2492.773 kb on + strand, within A4249_RS12420 at 2492.774 kb on - strand, within A4249_RS12420 at 2493.068 kb on + strand, within A4249_RS12420 at 2493.068 kb on + strand, within A4249_RS12420 at 2493.068 kb on + strand, within A4249_RS12420 at 2493.069 kb on - strand, within A4249_RS12420 at 2493.095 kb on + strand, within A4249_RS12420 at 2493.096 kb on - strand, within A4249_RS12420 at 2493.130 kb on + strand at 2493.131 kb on - strand at 2493.179 kb on + strand at 2493.179 kb on + strand at 2493.180 kb on - strand at 2493.180 kb on - strand at 2493.180 kb on - strand at 2493.180 kb on - strand at 2493.249 kb on + strand at 2493.249 kb on + strand at 2493.249 kb on + strand at 2493.250 kb on - strand at 2493.273 kb on + strand at 2493.273 kb on + strand at 2493.273 kb on + strand at 2493.273 kb on + strand at 2493.273 kb on + strand at 2493.273 kb on + strand at 2493.273 kb on + strand at 2493.273 kb on + strand at 2493.273 kb on + strand at 2493.273 kb on + strand at 2493.273 kb on + strand at 2493.274 kb on - strand at 2493.274 kb on - strand at 2493.274 kb on - strand at 2493.274 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,489,521 + A4249_RS12410 0.61 -0.2 2,489,521 + A4249_RS12410 0.61 +0.1 2,489,521 + A4249_RS12410 0.61 -0.2 2,489,522 - A4249_RS12410 0.61 +0.2 2,489,522 - A4249_RS12410 0.61 +0.3 2,489,653 + A4249_RS12410 0.67 -0.8 2,489,653 + A4249_RS12410 0.67 +0.2 2,489,653 + A4249_RS12410 0.67 +0.2 2,489,653 + A4249_RS12410 0.67 +0.4 2,489,653 + A4249_RS12410 0.67 -0.3 2,489,653 + A4249_RS12410 0.67 -1.5 2,489,654 - A4249_RS12410 0.67 +1.4 2,489,654 - A4249_RS12410 0.67 -0.3 2,489,654 - A4249_RS12410 0.67 +1.0 2,489,654 - A4249_RS12410 0.67 +0.2 2,489,662 + A4249_RS12410 0.67 +0.0 2,489,662 + A4249_RS12410 0.67 +0.5 2,489,662 + A4249_RS12410 0.67 -1.3 2,489,662 + A4249_RS12410 0.67 -0.1 2,489,662 + A4249_RS12410 0.67 +0.1 2,489,662 + A4249_RS12410 0.67 -0.5 2,489,662 + A4249_RS12410 0.67 -0.2 2,489,662 + A4249_RS12410 0.67 +0.4 2,489,662 + A4249_RS12410 0.67 -0.4 2,489,662 + A4249_RS12410 0.67 -1.3 2,489,663 - A4249_RS12410 0.67 -2.4 2,489,663 - A4249_RS12410 0.67 +1.3 2,489,663 - A4249_RS12410 0.67 -0.3 2,489,663 - A4249_RS12410 0.67 +0.2 2,489,698 + A4249_RS12410 0.69 +0.3 2,489,701 + A4249_RS12410 0.69 +0.3 2,489,701 + A4249_RS12410 0.69 -0.2 2,489,701 + A4249_RS12410 0.69 +0.0 2,489,749 + A4249_RS12410 0.71 -0.1 2,489,829 - A4249_RS12410 0.75 +0.6 2,489,829 - A4249_RS12410 0.75 -1.3 2,489,829 - A4249_RS12410 0.75 -0.2 2,489,829 - A4249_RS12410 0.75 +0.2 2,489,830 + A4249_RS12410 0.75 +1.4 2,489,830 + A4249_RS12410 0.75 -0.6 2,489,830 + A4249_RS12410 0.75 +0.7 2,489,830 + A4249_RS12410 0.75 +0.7 2,489,830 + A4249_RS12410 0.75 -0.0 2,489,830 + A4249_RS12410 0.75 -0.2 2,489,830 + A4249_RS12410 0.75 -0.5 2,489,830 + A4249_RS12410 0.75 -0.2 2,489,831 - A4249_RS12410 0.75 -0.7 2,489,831 - A4249_RS12410 0.75 +0.3 2,489,831 - A4249_RS12410 0.75 -0.9 2,489,831 - A4249_RS12410 0.75 -0.0 2,489,831 - A4249_RS12410 0.75 +0.2 2,489,878 + A4249_RS12410 0.77 +0.6 2,489,878 + A4249_RS12410 0.77 +0.8 2,489,878 + A4249_RS12410 0.77 -0.7 2,489,879 - A4249_RS12410 0.77 +0.9 2,489,879 - A4249_RS12410 0.77 +0.6 2,489,929 + A4249_RS12410 0.80 -1.2 2,489,929 + A4249_RS12410 0.80 +1.1 2,489,929 + A4249_RS12410 0.80 -0.2 2,489,929 + A4249_RS12410 0.80 +0.3 2,489,930 - A4249_RS12410 0.80 -0.7 2,489,930 - A4249_RS12410 0.80 -0.3 2,490,058 + A4249_RS12410 0.86 -0.6 2,490,058 + A4249_RS12410 0.86 -0.3 2,490,058 + A4249_RS12410 0.86 +0.4 2,490,059 - A4249_RS12410 0.86 -0.7 2,490,059 - A4249_RS12410 0.86 -1.7 2,490,059 - A4249_RS12410 0.86 +1.1 2,490,059 - A4249_RS12410 0.86 +0.4 2,490,112 + A4249_RS12410 0.88 -1.1 2,490,112 + A4249_RS12410 0.88 +0.4 2,490,113 - A4249_RS12410 0.89 -0.5 2,490,181 + -0.1 2,490,360 + -0.2 2,490,360 + -0.4 2,490,360 + -0.2 2,490,360 + +0.4 2,490,360 + -0.4 2,490,360 + +0.2 2,490,360 + +1.5 2,490,360 + -0.1 2,490,360 + -0.4 2,490,360 + +0.4 2,490,360 + +1.2 2,490,360 + +0.4 2,490,361 - -0.4 2,490,361 - -0.4 2,490,361 - +1.1 2,490,361 - +2.2 2,490,361 - +0.1 2,490,361 - +0.2 2,490,361 - -0.1 2,490,361 - -0.4 2,490,361 - -0.1 2,490,361 - -0.0 2,490,361 - +0.3 2,490,361 - -0.5 2,490,361 - +0.6 2,490,406 + +0.5 2,490,406 + +0.8 2,490,406 + +0.1 2,490,406 + +0.7 2,490,406 + -0.3 2,490,407 - +0.8 2,490,491 + -0.3 2,490,491 + -0.5 2,490,492 - +0.1 2,490,492 - +0.0 2,490,534 + -0.4 2,490,534 + -0.7 2,490,534 + +1.0 2,490,535 - +0.4 2,490,535 - -0.5 2,490,535 - +0.2 2,490,535 - +1.7 2,490,536 + +0.8 2,490,536 + -0.0 2,490,536 + +0.2 2,490,536 + -0.9 2,490,536 + +1.2 2,490,536 + -0.2 2,490,536 + -0.4 2,490,537 - +0.7 2,490,537 - -0.2 2,490,537 - +0.2 2,490,537 - +0.2 2,491,899 - A4249_RS12415 0.75 +0.2 2,491,929 + A4249_RS12415 0.77 +0.7 2,491,929 + A4249_RS12415 0.77 +0.3 2,491,929 + A4249_RS12415 0.77 -0.6 2,491,929 + A4249_RS12415 0.77 +0.9 2,491,929 + A4249_RS12415 0.77 -0.3 2,491,930 - A4249_RS12415 0.77 +0.8 2,491,930 - A4249_RS12415 0.77 -0.3 2,491,930 - A4249_RS12415 0.77 +0.4 2,491,930 - A4249_RS12415 0.77 -1.3 2,491,930 - A4249_RS12415 0.77 +0.2 2,491,930 - A4249_RS12415 0.77 +0.4 2,491,930 - A4249_RS12415 0.77 -0.5 2,492,109 + A4249_RS12415 0.87 -1.0 2,492,109 + A4249_RS12415 0.87 -0.1 2,492,109 + A4249_RS12415 0.87 +0.6 2,492,109 + A4249_RS12415 0.87 -0.3 2,492,110 - A4249_RS12415 0.87 +0.3 2,492,110 - A4249_RS12415 0.87 -0.8 2,492,110 - A4249_RS12415 0.87 +0.8 2,492,314 + +1.2 2,492,314 + -0.8 2,492,346 + -0.2 2,492,347 - -0.4 2,492,360 + -1.5 2,492,360 + -0.3 2,492,360 + +1.7 2,492,361 - +1.4 2,492,361 - -0.3 2,492,472 + +0.2 2,492,472 + +0.3 2,492,473 - +0.1 2,492,473 - -0.3 2,492,473 - +0.3 2,492,521 - -0.2 2,492,537 + +0.3 2,492,537 + -0.0 2,492,538 - -0.4 2,492,539 + +1.2 2,492,539 + +0.5 2,492,539 + -0.7 2,492,539 + +0.2 2,492,540 - -0.9 2,492,548 + -0.4 2,492,549 - +0.0 2,492,660 + A4249_RS12420 0.19 -0.4 2,492,661 - A4249_RS12420 0.19 -1.0 2,492,661 - A4249_RS12420 0.19 +0.4 2,492,773 + A4249_RS12420 0.36 +0.5 2,492,773 + A4249_RS12420 0.36 -0.7 2,492,774 - A4249_RS12420 0.36 -0.0 2,493,068 + A4249_RS12420 0.82 -0.2 2,493,068 + A4249_RS12420 0.82 +0.8 2,493,068 + A4249_RS12420 0.82 -0.8 2,493,069 - A4249_RS12420 0.82 -0.5 2,493,095 + A4249_RS12420 0.86 +0.8 2,493,096 - A4249_RS12420 0.87 +1.3 2,493,130 + -0.1 2,493,131 - -1.0 2,493,179 + -0.4 2,493,179 + +0.2 2,493,180 - -0.2 2,493,180 - +0.7 2,493,180 - -1.4 2,493,180 - +0.8 2,493,249 + -0.6 2,493,249 + +1.1 2,493,249 + -0.1 2,493,250 - -0.5 2,493,273 + -0.0 2,493,273 + -0.5 2,493,273 + -0.8 2,493,273 + -0.4 2,493,273 + -0.1 2,493,273 + +0.9 2,493,273 + +0.6 2,493,273 + -0.6 2,493,273 + -0.0 2,493,273 + +0.3 2,493,273 + +0.9 2,493,274 - +0.4 2,493,274 - +0.4 2,493,274 - +0.8 2,493,274 - +0.8
Or see this region's nucleotide sequence