Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS11675

Experiment: Adenine 0.74 mM (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntA4249_RS11670 and A4249_RS11675 are separated by 544 nucleotidesA4249_RS11675 and A4249_RS11680 are separated by 433 nucleotides A4249_RS11670: A4249_RS11670 - mercury(II) reductase, at 2,342,361 to 2,343,845 _RS11670 A4249_RS11675: A4249_RS11675 - hypothetical protein, at 2,344,390 to 2,344,614 _RS11675 A4249_RS11680: A4249_RS11680 - 7-cyano-7-deazaguanine synthase, at 2,345,048 to 2,345,641 _RS11680 Position (kb) 2344 2345Strain fitness (log2 ratio) -2 -1 0 1at 2343.390 kb on + strand, within A4249_RS11670at 2343.390 kb on + strand, within A4249_RS11670at 2343.390 kb on + strand, within A4249_RS11670at 2343.390 kb on + strand, within A4249_RS11670at 2343.391 kb on - strand, within A4249_RS11670at 2343.391 kb on - strand, within A4249_RS11670at 2343.391 kb on - strand, within A4249_RS11670at 2343.391 kb on - strand, within A4249_RS11670at 2343.391 kb on - strand, within A4249_RS11670at 2343.391 kb on - strand, within A4249_RS11670at 2343.391 kb on - strand, within A4249_RS11670at 2343.392 kb on + strand, within A4249_RS11670at 2343.392 kb on + strand, within A4249_RS11670at 2343.392 kb on + strand, within A4249_RS11670at 2343.393 kb on - strand, within A4249_RS11670at 2343.402 kb on + strand, within A4249_RS11670at 2343.402 kb on + strand, within A4249_RS11670at 2343.402 kb on + strand, within A4249_RS11670at 2343.453 kb on + strand, within A4249_RS11670at 2343.453 kb on + strand, within A4249_RS11670at 2343.454 kb on - strand, within A4249_RS11670at 2343.454 kb on - strand, within A4249_RS11670at 2343.482 kb on - strand, within A4249_RS11670at 2343.516 kb on - strand, within A4249_RS11670at 2343.762 kb on + strandat 2343.763 kb on - strandat 2343.763 kb on - strandat 2343.763 kb on - strandat 2343.817 kb on + strandat 2343.817 kb on + strandat 2343.817 kb on + strandat 2343.817 kb on + strandat 2343.817 kb on + strandat 2343.817 kb on + strandat 2343.817 kb on + strandat 2343.817 kb on + strandat 2343.818 kb on - strandat 2343.818 kb on - strandat 2343.818 kb on - strandat 2343.818 kb on - strandat 2343.818 kb on - strandat 2343.933 kb on + strandat 2343.933 kb on + strandat 2343.933 kb on + strandat 2343.933 kb on + strandat 2343.934 kb on - strandat 2343.934 kb on - strandat 2344.121 kb on + strandat 2344.121 kb on + strandat 2344.122 kb on - strandat 2344.169 kb on - strandat 2344.196 kb on + strandat 2344.196 kb on + strandat 2344.196 kb on + strandat 2344.196 kb on + strandat 2344.197 kb on - strandat 2344.197 kb on - strandat 2344.197 kb on - strandat 2344.268 kb on + strandat 2344.269 kb on - strandat 2344.269 kb on - strandat 2344.269 kb on - strandat 2344.384 kb on + strandat 2344.384 kb on + strandat 2344.384 kb on + strandat 2344.384 kb on + strandat 2344.384 kb on + strandat 2344.385 kb on - strandat 2344.385 kb on - strandat 2344.385 kb on - strandat 2344.432 kb on - strand, within A4249_RS11675at 2344.432 kb on - strand, within A4249_RS11675at 2344.432 kb on - strand, within A4249_RS11675at 2344.432 kb on - strand, within A4249_RS11675at 2344.665 kb on + strandat 2344.665 kb on + strandat 2344.665 kb on + strandat 2344.665 kb on + strandat 2344.665 kb on + strandat 2344.665 kb on + strandat 2344.665 kb on + strandat 2344.665 kb on + strandat 2344.666 kb on - strandat 2344.666 kb on - strandat 2344.679 kb on + strandat 2344.679 kb on + strandat 2344.679 kb on + strandat 2344.680 kb on - strandat 2344.680 kb on - strandat 2344.692 kb on + strandat 2344.693 kb on - strandat 2344.693 kb on - strandat 2344.693 kb on - strandat 2344.693 kb on - strandat 2344.733 kb on + strandat 2344.734 kb on - strandat 2344.768 kb on + strandat 2344.768 kb on + strandat 2344.768 kb on + strandat 2344.768 kb on + strandat 2344.769 kb on - strandat 2344.769 kb on - strandat 2344.769 kb on - strandat 2344.776 kb on + strandat 2344.776 kb on + strandat 2344.776 kb on + strandat 2344.776 kb on + strandat 2344.777 kb on - strandat 2344.777 kb on - strandat 2344.777 kb on - strandat 2344.777 kb on - strandat 2344.777 kb on - strandat 2344.777 kb on - strandat 2344.777 kb on - strandat 2344.777 kb on - strandat 2344.777 kb on - strandat 2344.778 kb on + strandat 2344.778 kb on + strandat 2344.779 kb on - strandat 2344.827 kb on + strandat 2344.905 kb on + strandat 2344.905 kb on + strandat 2344.905 kb on + strandat 2344.906 kb on - strandat 2344.906 kb on - strandat 2345.131 kb on + strand, within A4249_RS11680at 2345.132 kb on - strand, within A4249_RS11680at 2345.153 kb on + strand, within A4249_RS11680at 2345.153 kb on + strand, within A4249_RS11680at 2345.154 kb on - strand, within A4249_RS11680at 2345.228 kb on + strand, within A4249_RS11680at 2345.228 kb on + strand, within A4249_RS11680at 2345.229 kb on - strand, within A4249_RS11680at 2345.229 kb on - strand, within A4249_RS11680at 2345.556 kb on + strand, within A4249_RS11680

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
remove
2,343,390 + A4249_RS11670 0.69 -0.2
2,343,390 + A4249_RS11670 0.69 +1.3
2,343,390 + A4249_RS11670 0.69 +0.2
2,343,390 + A4249_RS11670 0.69 -1.4
2,343,391 - A4249_RS11670 0.69 -0.1
2,343,391 - A4249_RS11670 0.69 -0.8
2,343,391 - A4249_RS11670 0.69 -1.3
2,343,391 - A4249_RS11670 0.69 +0.3
2,343,391 - A4249_RS11670 0.69 -2.5
2,343,391 - A4249_RS11670 0.69 +0.2
2,343,391 - A4249_RS11670 0.69 +0.2
2,343,392 + A4249_RS11670 0.69 -0.1
2,343,392 + A4249_RS11670 0.69 +1.1
2,343,392 + A4249_RS11670 0.69 -0.3
2,343,393 - A4249_RS11670 0.69 -0.1
2,343,402 + A4249_RS11670 0.70 -0.4
2,343,402 + A4249_RS11670 0.70 +0.7
2,343,402 + A4249_RS11670 0.70 +1.1
2,343,453 + A4249_RS11670 0.74 -0.2
2,343,453 + A4249_RS11670 0.74 +0.4
2,343,454 - A4249_RS11670 0.74 +0.1
2,343,454 - A4249_RS11670 0.74 +1.2
2,343,482 - A4249_RS11670 0.75 +0.4
2,343,516 - A4249_RS11670 0.78 -0.7
2,343,762 + -0.6
2,343,763 - -0.1
2,343,763 - -1.3
2,343,763 - +0.4
2,343,817 + -0.5
2,343,817 + -0.9
2,343,817 + -0.2
2,343,817 + +0.6
2,343,817 + -1.6
2,343,817 + +0.1
2,343,817 + +0.6
2,343,817 + +0.4
2,343,818 - +0.4
2,343,818 - -0.2
2,343,818 - +0.7
2,343,818 - +0.2
2,343,818 - -0.2
2,343,933 + +0.2
2,343,933 + +0.8
2,343,933 + +0.6
2,343,933 + -1.7
2,343,934 - +0.1
2,343,934 - +0.4
2,344,121 + +1.3
2,344,121 + +0.7
2,344,122 - -0.8
2,344,169 - +0.3
2,344,196 + -0.5
2,344,196 + -0.0
2,344,196 + -0.4
2,344,196 + +0.4
2,344,197 - -0.7
2,344,197 - -1.4
2,344,197 - +0.1
2,344,268 + +1.2
2,344,269 - -0.1
2,344,269 - -1.0
2,344,269 - -0.1
2,344,384 + +0.3
2,344,384 + -0.2
2,344,384 + -1.3
2,344,384 + -0.7
2,344,384 + +0.2
2,344,385 - -0.0
2,344,385 - -0.0
2,344,385 - +0.4
2,344,432 - A4249_RS11675 0.19 -0.2
2,344,432 - A4249_RS11675 0.19 +0.1
2,344,432 - A4249_RS11675 0.19 +0.3
2,344,432 - A4249_RS11675 0.19 +0.6
2,344,665 + +0.7
2,344,665 + -0.2
2,344,665 + -0.1
2,344,665 + +0.0
2,344,665 + -0.2
2,344,665 + +0.6
2,344,665 + -0.1
2,344,665 + -0.5
2,344,666 - -0.7
2,344,666 - +0.3
2,344,679 + +0.4
2,344,679 + -0.7
2,344,679 + +0.7
2,344,680 - -0.5
2,344,680 - -0.0
2,344,692 + +0.3
2,344,693 - -0.6
2,344,693 - +0.2
2,344,693 - +0.2
2,344,693 - +0.2
2,344,733 + +0.3
2,344,734 - -0.3
2,344,768 + +0.3
2,344,768 + -0.1
2,344,768 + +0.7
2,344,768 + -0.1
2,344,769 - -0.4
2,344,769 - -0.8
2,344,769 - -0.8
2,344,776 + +0.3
2,344,776 + -0.1
2,344,776 + +0.1
2,344,776 + -0.4
2,344,777 - -0.0
2,344,777 - -0.2
2,344,777 - -0.0
2,344,777 - -0.6
2,344,777 - -0.4
2,344,777 - -0.3
2,344,777 - +1.4
2,344,777 - -0.0
2,344,777 - +0.3
2,344,778 + +0.1
2,344,778 + +0.0
2,344,779 - +0.2
2,344,827 + -0.4
2,344,905 + +0.2
2,344,905 + +0.4
2,344,905 + -0.3
2,344,906 - -0.5
2,344,906 - +0.8
2,345,131 + A4249_RS11680 0.14 -0.5
2,345,132 - A4249_RS11680 0.14 -0.0
2,345,153 + A4249_RS11680 0.18 +0.3
2,345,153 + A4249_RS11680 0.18 +0.3
2,345,154 - A4249_RS11680 0.18 +0.6
2,345,228 + A4249_RS11680 0.30 -0.5
2,345,228 + A4249_RS11680 0.30 +0.9
2,345,229 - A4249_RS11680 0.30 -0.3
2,345,229 - A4249_RS11680 0.30 +1.2
2,345,556 + A4249_RS11680 0.86 +0.6

Or see this region's nucleotide sequence