Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS11610

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS11600 and A4249_RS16630 overlap by 1 nucleotidesA4249_RS16630 and A4249_RS11605 overlap by 4 nucleotidesA4249_RS11605 and A4249_RS11610 are separated by 315 nucleotidesA4249_RS11610 and A4249_RS11615 are separated by 179 nucleotidesA4249_RS11615 and A4249_RS11625 overlap by 14 nucleotides A4249_RS11600: A4249_RS11600 - cytochrome d ubiquinol oxidase subunit II, at 2,332,557 to 2,333,558 _RS11600 A4249_RS16630: A4249_RS16630 - DUF2474 family protein, at 2,333,558 to 2,333,686 _RS16630 A4249_RS11605: A4249_RS11605 - isoprenylcysteine carboxylmethyltransferase family protein, at 2,333,683 to 2,334,168 _RS11605 A4249_RS11610: A4249_RS11610 - alginate export family protein, at 2,334,484 to 2,335,026 _RS11610 A4249_RS11615: A4249_RS11615 - TnsA endonuclease N-terminal domain-containing protein, at 2,335,206 to 2,335,847 _RS11615 A4249_RS11625: A4249_RS11625 - Mu transposase C-terminal domain-containing protein, at 2,335,834 to 2,337,405 _RS11625 Position (kb) 2334 2335 2336Strain fitness (log2 ratio) -2 -1 0 1 2at 2333.494 kb on + strandat 2333.495 kb on - strandat 2333.495 kb on - strandat 2333.495 kb on - strandat 2333.499 kb on + strandat 2333.499 kb on + strandat 2333.500 kb on - strandat 2333.500 kb on - strandat 2333.500 kb on - strandat 2333.500 kb on - strandat 2333.508 kb on + strandat 2333.509 kb on - strandat 2333.509 kb on - strandat 2333.514 kb on + strandat 2333.515 kb on - strandat 2333.648 kb on + strand, within A4249_RS16630at 2333.649 kb on - strand, within A4249_RS16630at 2333.953 kb on + strand, within A4249_RS11605at 2333.954 kb on - strand, within A4249_RS11605at 2333.954 kb on - strand, within A4249_RS11605at 2333.954 kb on - strand, within A4249_RS11605at 2334.112 kb on + strand, within A4249_RS11605at 2334.112 kb on + strand, within A4249_RS11605at 2334.166 kb on + strandat 2334.166 kb on + strandat 2334.167 kb on - strandat 2334.167 kb on - strandat 2334.177 kb on + strandat 2334.178 kb on - strandat 2334.178 kb on - strandat 2334.178 kb on - strandat 2334.178 kb on - strandat 2334.335 kb on + strandat 2334.336 kb on - strandat 2334.336 kb on - strandat 2334.336 kb on - strandat 2334.568 kb on + strand, within A4249_RS11610at 2334.568 kb on + strand, within A4249_RS11610at 2334.569 kb on - strand, within A4249_RS11610at 2334.688 kb on + strand, within A4249_RS11610at 2334.688 kb on + strand, within A4249_RS11610at 2334.688 kb on + strand, within A4249_RS11610at 2334.689 kb on - strand, within A4249_RS11610at 2334.689 kb on - strand, within A4249_RS11610at 2334.689 kb on - strand, within A4249_RS11610at 2334.689 kb on - strand, within A4249_RS11610at 2334.886 kb on + strand, within A4249_RS11610at 2334.886 kb on + strand, within A4249_RS11610at 2334.886 kb on + strand, within A4249_RS11610at 2334.886 kb on + strand, within A4249_RS11610at 2334.886 kb on + strand, within A4249_RS11610at 2334.886 kb on + strand, within A4249_RS11610at 2334.886 kb on + strand, within A4249_RS11610at 2334.887 kb on - strand, within A4249_RS11610at 2334.887 kb on - strand, within A4249_RS11610at 2334.887 kb on - strand, within A4249_RS11610at 2334.887 kb on - strand, within A4249_RS11610at 2334.887 kb on - strand, within A4249_RS11610at 2334.887 kb on - strand, within A4249_RS11610at 2334.892 kb on + strand, within A4249_RS11610at 2334.893 kb on - strand, within A4249_RS11610at 2334.893 kb on - strand, within A4249_RS11610at 2335.135 kb on + strandat 2335.135 kb on + strandat 2335.135 kb on + strandat 2335.135 kb on + strandat 2335.135 kb on + strandat 2335.136 kb on - strandat 2335.136 kb on - strandat 2335.148 kb on + strandat 2335.148 kb on + strandat 2335.149 kb on - strandat 2335.149 kb on - strandat 2335.160 kb on + strandat 2335.160 kb on + strandat 2335.161 kb on - strandat 2335.161 kb on - strandat 2335.240 kb on - strandat 2335.332 kb on - strand, within A4249_RS11615at 2335.332 kb on - strand, within A4249_RS11615at 2335.332 kb on - strand, within A4249_RS11615at 2335.352 kb on + strand, within A4249_RS11615at 2335.352 kb on + strand, within A4249_RS11615at 2335.353 kb on - strand, within A4249_RS11615at 2335.353 kb on - strand, within A4249_RS11615at 2335.353 kb on - strand, within A4249_RS11615at 2335.353 kb on - strand, within A4249_RS11615at 2335.353 kb on - strand, within A4249_RS11615at 2335.356 kb on + strand, within A4249_RS11615at 2335.356 kb on + strand, within A4249_RS11615at 2335.356 kb on + strand, within A4249_RS11615at 2335.356 kb on + strand, within A4249_RS11615at 2335.356 kb on + strand, within A4249_RS11615at 2335.356 kb on + strand, within A4249_RS11615at 2335.356 kb on + strand, within A4249_RS11615at 2335.356 kb on + strand, within A4249_RS11615at 2335.356 kb on + strand, within A4249_RS11615at 2335.356 kb on + strand, within A4249_RS11615at 2335.356 kb on + strand, within A4249_RS11615at 2335.356 kb on + strand, within A4249_RS11615at 2335.357 kb on - strand, within A4249_RS11615at 2335.357 kb on - strand, within A4249_RS11615at 2335.357 kb on - strand, within A4249_RS11615at 2335.357 kb on - strand, within A4249_RS11615at 2335.357 kb on - strand, within A4249_RS11615at 2335.357 kb on - strand, within A4249_RS11615at 2335.357 kb on - strand, within A4249_RS11615at 2335.357 kb on - strand, within A4249_RS11615at 2335.357 kb on - strand, within A4249_RS11615at 2335.357 kb on - strand, within A4249_RS11615at 2335.357 kb on - strand, within A4249_RS11615at 2335.357 kb on - strand, within A4249_RS11615at 2335.359 kb on - strand, within A4249_RS11615at 2335.359 kb on - strand, within A4249_RS11615at 2335.359 kb on - strand, within A4249_RS11615at 2335.450 kb on + strand, within A4249_RS11615at 2335.450 kb on + strand, within A4249_RS11615at 2335.450 kb on + strand, within A4249_RS11615at 2335.450 kb on + strand, within A4249_RS11615at 2335.451 kb on - strand, within A4249_RS11615at 2335.451 kb on - strand, within A4249_RS11615at 2335.451 kb on - strand, within A4249_RS11615at 2335.482 kb on + strand, within A4249_RS11615at 2335.482 kb on + strand, within A4249_RS11615at 2335.483 kb on - strand, within A4249_RS11615at 2335.500 kb on + strand, within A4249_RS11615at 2335.606 kb on + strand, within A4249_RS11615at 2335.606 kb on + strand, within A4249_RS11615at 2335.606 kb on + strand, within A4249_RS11615at 2335.606 kb on + strand, within A4249_RS11615at 2335.606 kb on + strand, within A4249_RS11615at 2335.606 kb on + strand, within A4249_RS11615at 2335.606 kb on + strand, within A4249_RS11615at 2335.606 kb on + strand, within A4249_RS11615at 2335.607 kb on - strand, within A4249_RS11615at 2335.667 kb on - strand, within A4249_RS11615at 2335.731 kb on + strand, within A4249_RS11615at 2335.731 kb on + strand, within A4249_RS11615at 2335.731 kb on + strand, within A4249_RS11615at 2335.731 kb on + strand, within A4249_RS11615at 2335.731 kb on + strand, within A4249_RS11615at 2335.731 kb on + strand, within A4249_RS11615at 2335.732 kb on - strand, within A4249_RS11615at 2335.732 kb on - strand, within A4249_RS11615at 2335.734 kb on + strand, within A4249_RS11615at 2335.734 kb on + strand, within A4249_RS11615at 2335.734 kb on + strand, within A4249_RS11615at 2335.734 kb on + strand, within A4249_RS11615at 2335.734 kb on + strand, within A4249_RS11615at 2335.734 kb on + strand, within A4249_RS11615at 2335.734 kb on + strand, within A4249_RS11615at 2335.734 kb on + strand, within A4249_RS11615at 2335.734 kb on + strand, within A4249_RS11615at 2335.734 kb on + strand, within A4249_RS11615at 2335.734 kb on + strand, within A4249_RS11615at 2335.735 kb on - strand, within A4249_RS11615at 2335.735 kb on - strand, within A4249_RS11615at 2335.735 kb on - strand, within A4249_RS11615at 2335.735 kb on - strand, within A4249_RS11615at 2335.735 kb on - strand, within A4249_RS11615at 2335.735 kb on - strand, within A4249_RS11615at 2335.735 kb on - strand, within A4249_RS11615at 2335.735 kb on - strand, within A4249_RS11615at 2335.735 kb on - strand, within A4249_RS11615at 2335.735 kb on - strand, within A4249_RS11615at 2335.735 kb on - strand, within A4249_RS11615at 2335.790 kb on + strandat 2335.791 kb on - strandat 2335.791 kb on - strandat 2335.791 kb on - strandat 2335.845 kb on + strandat 2335.845 kb on + strandat 2335.845 kb on + strandat 2335.845 kb on + strandat 2335.845 kb on + strandat 2335.845 kb on + strandat 2335.845 kb on + strandat 2335.845 kb on + strandat 2335.845 kb on + strandat 2335.845 kb on + strandat 2335.846 kb on - strandat 2335.846 kb on - strandat 2335.846 kb on - strandat 2335.846 kb on - strandat 2335.846 kb on - strandat 2335.846 kb on - strandat 2335.846 kb on - strandat 2335.846 kb on - strandat 2335.846 kb on - strandat 2335.846 kb on - strandat 2335.846 kb on - strandat 2335.850 kb on + strandat 2335.904 kb on + strandat 2335.921 kb on + strandat 2335.921 kb on + strandat 2335.921 kb on + strandat 2335.921 kb on + strandat 2335.921 kb on + strandat 2335.921 kb on + strandat 2335.921 kb on + strandat 2335.921 kb on + strandat 2335.922 kb on - strandat 2335.922 kb on - strandat 2335.922 kb on - strandat 2335.965 kb on + strandat 2335.966 kb on - strandat 2335.966 kb on - strandat 2335.991 kb on + strandat 2335.991 kb on + strandat 2335.991 kb on + strandat 2335.991 kb on + strandat 2335.991 kb on + strandat 2335.991 kb on + strandat 2336.020 kb on + strand, within A4249_RS11625at 2336.020 kb on + strand, within A4249_RS11625at 2336.020 kb on + strand, within A4249_RS11625at 2336.021 kb on - strand, within A4249_RS11625at 2336.021 kb on - strand, within A4249_RS11625at 2336.022 kb on + strand, within A4249_RS11625at 2336.022 kb on + strand, within A4249_RS11625at 2336.022 kb on + strand, within A4249_RS11625at 2336.022 kb on + strand, within A4249_RS11625at 2336.022 kb on + strand, within A4249_RS11625at 2336.023 kb on - strand, within A4249_RS11625at 2336.023 kb on - strand, within A4249_RS11625at 2336.023 kb on - strand, within A4249_RS11625

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,333,494 + +0.3
2,333,495 - +0.3
2,333,495 - -0.6
2,333,495 - +0.3
2,333,499 + -0.1
2,333,499 + -0.7
2,333,500 - +0.7
2,333,500 - +0.6
2,333,500 - +0.9
2,333,500 - -0.4
2,333,508 + +0.3
2,333,509 - -0.2
2,333,509 - -0.8
2,333,514 + -0.8
2,333,515 - -0.2
2,333,648 + A4249_RS16630 0.70 +0.2
2,333,649 - A4249_RS16630 0.71 -0.2
2,333,953 + A4249_RS11605 0.56 -0.5
2,333,954 - A4249_RS11605 0.56 -0.0
2,333,954 - A4249_RS11605 0.56 +1.0
2,333,954 - A4249_RS11605 0.56 +0.7
2,334,112 + A4249_RS11605 0.88 -1.2
2,334,112 + A4249_RS11605 0.88 -0.0
2,334,166 + -0.7
2,334,166 + -0.3
2,334,167 - +0.2
2,334,167 - -0.6
2,334,177 + -0.4
2,334,178 - -0.3
2,334,178 - -0.0
2,334,178 - +1.2
2,334,178 - -0.1
2,334,335 + +0.2
2,334,336 - -0.2
2,334,336 - +0.7
2,334,336 - -1.2
2,334,568 + A4249_RS11610 0.15 +0.2
2,334,568 + A4249_RS11610 0.15 +0.4
2,334,569 - A4249_RS11610 0.16 +1.3
2,334,688 + A4249_RS11610 0.38 +1.0
2,334,688 + A4249_RS11610 0.38 -0.6
2,334,688 + A4249_RS11610 0.38 +0.2
2,334,689 - A4249_RS11610 0.38 -0.8
2,334,689 - A4249_RS11610 0.38 -0.4
2,334,689 - A4249_RS11610 0.38 +0.7
2,334,689 - A4249_RS11610 0.38 +0.6
2,334,886 + A4249_RS11610 0.74 -1.0
2,334,886 + A4249_RS11610 0.74 -0.8
2,334,886 + A4249_RS11610 0.74 -0.1
2,334,886 + A4249_RS11610 0.74 +0.2
2,334,886 + A4249_RS11610 0.74 +0.5
2,334,886 + A4249_RS11610 0.74 +0.7
2,334,886 + A4249_RS11610 0.74 +0.7
2,334,887 - A4249_RS11610 0.74 -1.4
2,334,887 - A4249_RS11610 0.74 +0.8
2,334,887 - A4249_RS11610 0.74 -0.3
2,334,887 - A4249_RS11610 0.74 -0.6
2,334,887 - A4249_RS11610 0.74 +0.1
2,334,887 - A4249_RS11610 0.74 -0.3
2,334,892 + A4249_RS11610 0.75 -0.3
2,334,893 - A4249_RS11610 0.75 +0.5
2,334,893 - A4249_RS11610 0.75 -0.5
2,335,135 + -0.2
2,335,135 + -1.0
2,335,135 + -0.7
2,335,135 + -0.9
2,335,135 + +0.7
2,335,136 - -0.1
2,335,136 - +0.3
2,335,148 + -0.5
2,335,148 + +0.2
2,335,149 - -0.3
2,335,149 - +0.8
2,335,160 + +0.6
2,335,160 + +0.4
2,335,161 - +0.1
2,335,161 - -0.8
2,335,240 - +0.2
2,335,332 - A4249_RS11615 0.20 -0.0
2,335,332 - A4249_RS11615 0.20 -1.2
2,335,332 - A4249_RS11615 0.20 +0.0
2,335,352 + A4249_RS11615 0.23 -0.7
2,335,352 + A4249_RS11615 0.23 -1.5
2,335,353 - A4249_RS11615 0.23 +0.4
2,335,353 - A4249_RS11615 0.23 +0.5
2,335,353 - A4249_RS11615 0.23 +0.8
2,335,353 - A4249_RS11615 0.23 +0.2
2,335,353 - A4249_RS11615 0.23 -0.2
2,335,356 + A4249_RS11615 0.23 +0.5
2,335,356 + A4249_RS11615 0.23 -0.3
2,335,356 + A4249_RS11615 0.23 -0.6
2,335,356 + A4249_RS11615 0.23 +0.2
2,335,356 + A4249_RS11615 0.23 +0.3
2,335,356 + A4249_RS11615 0.23 -1.9
2,335,356 + A4249_RS11615 0.23 -0.3
2,335,356 + A4249_RS11615 0.23 +0.9
2,335,356 + A4249_RS11615 0.23 -0.7
2,335,356 + A4249_RS11615 0.23 +0.9
2,335,356 + A4249_RS11615 0.23 -0.1
2,335,356 + A4249_RS11615 0.23 -0.5
2,335,357 - A4249_RS11615 0.24 -0.2
2,335,357 - A4249_RS11615 0.24 -0.5
2,335,357 - A4249_RS11615 0.24 -0.8
2,335,357 - A4249_RS11615 0.24 +0.7
2,335,357 - A4249_RS11615 0.24 +0.8
2,335,357 - A4249_RS11615 0.24 -1.7
2,335,357 - A4249_RS11615 0.24 -0.8
2,335,357 - A4249_RS11615 0.24 -0.2
2,335,357 - A4249_RS11615 0.24 +0.2
2,335,357 - A4249_RS11615 0.24 -1.0
2,335,357 - A4249_RS11615 0.24 +0.3
2,335,357 - A4249_RS11615 0.24 -0.9
2,335,359 - A4249_RS11615 0.24 +0.7
2,335,359 - A4249_RS11615 0.24 +0.9
2,335,359 - A4249_RS11615 0.24 +0.6
2,335,450 + A4249_RS11615 0.38 -0.9
2,335,450 + A4249_RS11615 0.38 -0.8
2,335,450 + A4249_RS11615 0.38 -1.2
2,335,450 + A4249_RS11615 0.38 -0.8
2,335,451 - A4249_RS11615 0.38 +0.0
2,335,451 - A4249_RS11615 0.38 -0.6
2,335,451 - A4249_RS11615 0.38 -0.1
2,335,482 + A4249_RS11615 0.43 -0.3
2,335,482 + A4249_RS11615 0.43 -1.0
2,335,483 - A4249_RS11615 0.43 -1.3
2,335,500 + A4249_RS11615 0.46 +0.2
2,335,606 + A4249_RS11615 0.62 -0.3
2,335,606 + A4249_RS11615 0.62 +1.2
2,335,606 + A4249_RS11615 0.62 +0.0
2,335,606 + A4249_RS11615 0.62 +0.2
2,335,606 + A4249_RS11615 0.62 +0.4
2,335,606 + A4249_RS11615 0.62 +0.6
2,335,606 + A4249_RS11615 0.62 +0.3
2,335,606 + A4249_RS11615 0.62 +1.0
2,335,607 - A4249_RS11615 0.62 +2.0
2,335,667 - A4249_RS11615 0.72 -0.5
2,335,731 + A4249_RS11615 0.82 +0.4
2,335,731 + A4249_RS11615 0.82 +0.9
2,335,731 + A4249_RS11615 0.82 -0.5
2,335,731 + A4249_RS11615 0.82 -0.8
2,335,731 + A4249_RS11615 0.82 -0.3
2,335,731 + A4249_RS11615 0.82 +0.6
2,335,732 - A4249_RS11615 0.82 +0.3
2,335,732 - A4249_RS11615 0.82 -0.8
2,335,734 + A4249_RS11615 0.82 -0.3
2,335,734 + A4249_RS11615 0.82 -0.1
2,335,734 + A4249_RS11615 0.82 +0.8
2,335,734 + A4249_RS11615 0.82 +0.8
2,335,734 + A4249_RS11615 0.82 +0.6
2,335,734 + A4249_RS11615 0.82 +0.2
2,335,734 + A4249_RS11615 0.82 +0.0
2,335,734 + A4249_RS11615 0.82 -0.3
2,335,734 + A4249_RS11615 0.82 +0.0
2,335,734 + A4249_RS11615 0.82 -0.8
2,335,734 + A4249_RS11615 0.82 -1.4
2,335,735 - A4249_RS11615 0.82 -0.3
2,335,735 - A4249_RS11615 0.82 -0.3
2,335,735 - A4249_RS11615 0.82 +0.9
2,335,735 - A4249_RS11615 0.82 +0.6
2,335,735 - A4249_RS11615 0.82 +0.6
2,335,735 - A4249_RS11615 0.82 +0.9
2,335,735 - A4249_RS11615 0.82 +0.2
2,335,735 - A4249_RS11615 0.82 +0.0
2,335,735 - A4249_RS11615 0.82 -0.5
2,335,735 - A4249_RS11615 0.82 -0.3
2,335,735 - A4249_RS11615 0.82 +0.2
2,335,790 + +0.0
2,335,791 - -0.2
2,335,791 - -0.7
2,335,791 - +0.9
2,335,845 + -1.8
2,335,845 + -0.5
2,335,845 + +0.3
2,335,845 + +0.3
2,335,845 + -0.3
2,335,845 + +0.1
2,335,845 + -0.3
2,335,845 + +0.2
2,335,845 + -2.2
2,335,845 + -0.7
2,335,846 - -0.7
2,335,846 - +1.2
2,335,846 - +0.5
2,335,846 - -0.1
2,335,846 - +0.3
2,335,846 - -0.3
2,335,846 - -0.7
2,335,846 - -0.5
2,335,846 - -1.7
2,335,846 - -1.8
2,335,846 - +0.3
2,335,850 + -0.2
2,335,904 + +0.0
2,335,921 + +0.0
2,335,921 + +0.2
2,335,921 + +0.8
2,335,921 + +0.5
2,335,921 + +0.3
2,335,921 + +0.7
2,335,921 + +0.2
2,335,921 + -0.2
2,335,922 - -0.8
2,335,922 - +0.6
2,335,922 - +1.0
2,335,965 + +0.7
2,335,966 - -0.5
2,335,966 - +1.0
2,335,991 + +0.2
2,335,991 + -0.7
2,335,991 + -0.1
2,335,991 + -1.7
2,335,991 + -0.1
2,335,991 + +0.4
2,336,020 + A4249_RS11625 0.12 +0.3
2,336,020 + A4249_RS11625 0.12 +0.2
2,336,020 + A4249_RS11625 0.12 +0.4
2,336,021 - A4249_RS11625 0.12 +0.5
2,336,021 - A4249_RS11625 0.12 +1.5
2,336,022 + A4249_RS11625 0.12 +0.4
2,336,022 + A4249_RS11625 0.12 +1.0
2,336,022 + A4249_RS11625 0.12 -0.1
2,336,022 + A4249_RS11625 0.12 +0.4
2,336,022 + A4249_RS11625 0.12 -0.7
2,336,023 - A4249_RS11625 0.12 +0.7
2,336,023 - A4249_RS11625 0.12 -0.1
2,336,023 - A4249_RS11625 0.12 -0.0

Or see this region's nucleotide sequence