Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS11525 and A4249_RS11530 are separated by 99 nucleotides A4249_RS11530 and A4249_RS11535 are separated by 64 nucleotides A4249_RS11535 and A4249_RS11540 overlap by 1 nucleotides A4249_RS11540 and A4249_RS11545 are separated by 35 nucleotides
A4249_RS11525: A4249_RS11525 - DsrE family protein, at 2,320,655 to 2,321,179
_RS11525
A4249_RS11530: A4249_RS11530 - peroxiredoxin, at 2,321,279 to 2,321,929
_RS11530
A4249_RS11535: A4249_RS11535 - MBL fold metallo-hydrolase, at 2,321,994 to 2,322,893
_RS11535
A4249_RS11540: A4249_RS11540 - substrate-binding domain-containing protein, at 2,322,893 to 2,323,666
_RS11540
A4249_RS11545: A4249_RS11545 - L,D-transpeptidase family protein, at 2,323,702 to 2,325,192
_RS11545
Position (kb)
2321
2322
2323 Strain fitness (log2 ratio)
-2
-1
0
1 at 2321.160 kb on - strand at 2321.160 kb on - strand at 2321.240 kb on - strand at 2321.272 kb on + strand at 2321.273 kb on - strand at 2321.273 kb on - strand at 2321.360 kb on + strand, within A4249_RS11530 at 2321.493 kb on + strand, within A4249_RS11530 at 2321.514 kb on + strand, within A4249_RS11530 at 2321.514 kb on + strand, within A4249_RS11530 at 2321.514 kb on + strand, within A4249_RS11530 at 2321.514 kb on + strand, within A4249_RS11530 at 2321.515 kb on - strand, within A4249_RS11530 at 2321.603 kb on + strand, within A4249_RS11530 at 2321.603 kb on + strand, within A4249_RS11530 at 2321.693 kb on + strand, within A4249_RS11530 at 2321.693 kb on + strand, within A4249_RS11530 at 2321.693 kb on + strand, within A4249_RS11530 at 2321.693 kb on + strand, within A4249_RS11530 at 2321.693 kb on + strand, within A4249_RS11530 at 2321.693 kb on + strand, within A4249_RS11530 at 2321.693 kb on + strand, within A4249_RS11530 at 2321.694 kb on - strand, within A4249_RS11530 at 2321.694 kb on - strand, within A4249_RS11530 at 2321.694 kb on - strand, within A4249_RS11530 at 2321.694 kb on - strand, within A4249_RS11530 at 2321.694 kb on - strand, within A4249_RS11530 at 2321.694 kb on - strand, within A4249_RS11530 at 2321.694 kb on - strand, within A4249_RS11530 at 2321.695 kb on - strand, within A4249_RS11530 at 2321.696 kb on + strand, within A4249_RS11530 at 2321.696 kb on + strand, within A4249_RS11530 at 2321.696 kb on + strand, within A4249_RS11530 at 2321.696 kb on + strand, within A4249_RS11530 at 2321.697 kb on - strand, within A4249_RS11530 at 2321.697 kb on - strand, within A4249_RS11530 at 2321.697 kb on - strand, within A4249_RS11530 at 2321.867 kb on + strand at 2321.867 kb on + strand at 2321.868 kb on - strand at 2321.868 kb on - strand at 2321.868 kb on - strand at 2321.868 kb on - strand at 2321.868 kb on - strand at 2321.873 kb on + strand at 2321.873 kb on + strand at 2321.873 kb on + strand at 2321.885 kb on + strand at 2321.885 kb on + strand at 2321.886 kb on - strand at 2321.886 kb on - strand at 2322.063 kb on + strand at 2322.063 kb on + strand at 2322.063 kb on + strand at 2322.063 kb on + strand at 2322.063 kb on + strand at 2322.064 kb on - strand at 2322.064 kb on - strand at 2322.064 kb on - strand at 2322.064 kb on - strand at 2322.064 kb on - strand at 2322.064 kb on - strand at 2322.174 kb on + strand, within A4249_RS11535 at 2322.174 kb on + strand, within A4249_RS11535 at 2322.174 kb on + strand, within A4249_RS11535 at 2322.174 kb on + strand, within A4249_RS11535 at 2322.175 kb on - strand, within A4249_RS11535 at 2322.175 kb on - strand, within A4249_RS11535 at 2322.175 kb on - strand, within A4249_RS11535 at 2322.175 kb on - strand, within A4249_RS11535 at 2322.175 kb on - strand, within A4249_RS11535 at 2322.175 kb on - strand, within A4249_RS11535 at 2322.175 kb on - strand, within A4249_RS11535 at 2322.330 kb on + strand, within A4249_RS11535 at 2322.331 kb on - strand, within A4249_RS11535 at 2322.331 kb on - strand, within A4249_RS11535 at 2322.331 kb on - strand, within A4249_RS11535 at 2322.331 kb on - strand, within A4249_RS11535 at 2322.331 kb on - strand, within A4249_RS11535 at 2322.331 kb on - strand, within A4249_RS11535 at 2322.331 kb on - strand, within A4249_RS11535 at 2322.465 kb on + strand, within A4249_RS11535 at 2322.465 kb on + strand, within A4249_RS11535 at 2322.465 kb on + strand, within A4249_RS11535 at 2322.465 kb on + strand, within A4249_RS11535 at 2322.465 kb on + strand, within A4249_RS11535 at 2322.465 kb on + strand, within A4249_RS11535 at 2322.465 kb on + strand, within A4249_RS11535 at 2322.465 kb on + strand, within A4249_RS11535 at 2322.466 kb on - strand, within A4249_RS11535 at 2322.466 kb on - strand, within A4249_RS11535 at 2322.466 kb on - strand, within A4249_RS11535 at 2322.466 kb on - strand, within A4249_RS11535 at 2322.513 kb on + strand, within A4249_RS11535 at 2322.513 kb on + strand, within A4249_RS11535 at 2322.514 kb on - strand, within A4249_RS11535 at 2322.627 kb on + strand, within A4249_RS11535 at 2322.628 kb on - strand, within A4249_RS11535 at 2322.628 kb on - strand, within A4249_RS11535 at 2322.628 kb on - strand, within A4249_RS11535 at 2322.780 kb on + strand, within A4249_RS11535 at 2322.780 kb on + strand, within A4249_RS11535 at 2322.780 kb on + strand, within A4249_RS11535 at 2322.780 kb on + strand, within A4249_RS11535 at 2322.781 kb on - strand, within A4249_RS11535 at 2322.843 kb on + strand at 2322.843 kb on + strand at 2322.843 kb on + strand at 2322.844 kb on - strand at 2322.844 kb on - strand at 2322.983 kb on + strand, within A4249_RS11540 at 2322.983 kb on + strand, within A4249_RS11540 at 2322.984 kb on - strand, within A4249_RS11540 at 2323.031 kb on + strand, within A4249_RS11540 at 2323.031 kb on + strand, within A4249_RS11540 at 2323.031 kb on + strand, within A4249_RS11540 at 2323.031 kb on + strand, within A4249_RS11540 at 2323.032 kb on - strand, within A4249_RS11540 at 2323.032 kb on - strand, within A4249_RS11540 at 2323.032 kb on - strand, within A4249_RS11540 at 2323.032 kb on - strand, within A4249_RS11540 at 2323.202 kb on + strand, within A4249_RS11540 at 2323.394 kb on + strand, within A4249_RS11540 at 2323.394 kb on + strand, within A4249_RS11540 at 2323.394 kb on + strand, within A4249_RS11540 at 2323.394 kb on + strand, within A4249_RS11540 at 2323.395 kb on - strand, within A4249_RS11540 at 2323.395 kb on - strand, within A4249_RS11540 at 2323.533 kb on - strand, within A4249_RS11540 at 2323.596 kb on + strand at 2323.596 kb on + strand at 2323.596 kb on + strand at 2323.597 kb on - strand at 2323.664 kb on + strand at 2323.664 kb on + strand at 2323.664 kb on + strand at 2323.665 kb on - strand at 2323.665 kb on - strand at 2323.665 kb on - strand at 2323.675 kb on + strand at 2323.675 kb on + strand at 2323.676 kb on - strand at 2323.811 kb on - strand at 2323.838 kb on - strand at 2323.838 kb on - strand at 2323.838 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,321,160 - -0.3 2,321,160 - -0.7 2,321,240 - +0.7 2,321,272 + +0.4 2,321,273 - +0.8 2,321,273 - -0.1 2,321,360 + A4249_RS11530 0.12 -0.4 2,321,493 + A4249_RS11530 0.33 -2.4 2,321,514 + A4249_RS11530 0.36 -0.6 2,321,514 + A4249_RS11530 0.36 -0.7 2,321,514 + A4249_RS11530 0.36 +0.3 2,321,514 + A4249_RS11530 0.36 +0.6 2,321,515 - A4249_RS11530 0.36 -0.3 2,321,603 + A4249_RS11530 0.50 -0.7 2,321,603 + A4249_RS11530 0.50 +0.1 2,321,693 + A4249_RS11530 0.64 -1.0 2,321,693 + A4249_RS11530 0.64 -0.1 2,321,693 + A4249_RS11530 0.64 +0.1 2,321,693 + A4249_RS11530 0.64 +0.7 2,321,693 + A4249_RS11530 0.64 -0.2 2,321,693 + A4249_RS11530 0.64 +0.5 2,321,693 + A4249_RS11530 0.64 +0.6 2,321,694 - A4249_RS11530 0.64 -0.2 2,321,694 - A4249_RS11530 0.64 -1.4 2,321,694 - A4249_RS11530 0.64 -0.0 2,321,694 - A4249_RS11530 0.64 +0.2 2,321,694 - A4249_RS11530 0.64 -0.2 2,321,694 - A4249_RS11530 0.64 +0.2 2,321,694 - A4249_RS11530 0.64 -0.1 2,321,695 - A4249_RS11530 0.64 -1.3 2,321,696 + A4249_RS11530 0.64 -0.4 2,321,696 + A4249_RS11530 0.64 -0.2 2,321,696 + A4249_RS11530 0.64 -0.1 2,321,696 + A4249_RS11530 0.64 +0.9 2,321,697 - A4249_RS11530 0.64 +0.2 2,321,697 - A4249_RS11530 0.64 -1.2 2,321,697 - A4249_RS11530 0.64 +0.7 2,321,867 + +0.4 2,321,867 + -0.3 2,321,868 - -0.1 2,321,868 - -0.1 2,321,868 - -1.3 2,321,868 - -2.4 2,321,868 - +0.2 2,321,873 + +0.7 2,321,873 + -2.0 2,321,873 + -0.1 2,321,885 + -0.6 2,321,885 + +0.2 2,321,886 - -0.2 2,321,886 - +0.2 2,322,063 + -0.4 2,322,063 + -0.2 2,322,063 + +0.8 2,322,063 + -0.2 2,322,063 + +0.6 2,322,064 - +0.4 2,322,064 - +0.8 2,322,064 - -0.4 2,322,064 - -0.2 2,322,064 - +0.6 2,322,064 - +0.2 2,322,174 + A4249_RS11535 0.20 -0.1 2,322,174 + A4249_RS11535 0.20 -0.0 2,322,174 + A4249_RS11535 0.20 -0.9 2,322,174 + A4249_RS11535 0.20 -0.1 2,322,175 - A4249_RS11535 0.20 -0.3 2,322,175 - A4249_RS11535 0.20 -0.1 2,322,175 - A4249_RS11535 0.20 +0.2 2,322,175 - A4249_RS11535 0.20 -0.2 2,322,175 - A4249_RS11535 0.20 -0.2 2,322,175 - A4249_RS11535 0.20 -0.2 2,322,175 - A4249_RS11535 0.20 -0.3 2,322,330 + A4249_RS11535 0.37 -1.2 2,322,331 - A4249_RS11535 0.37 +0.1 2,322,331 - A4249_RS11535 0.37 +0.2 2,322,331 - A4249_RS11535 0.37 +0.1 2,322,331 - A4249_RS11535 0.37 -0.4 2,322,331 - A4249_RS11535 0.37 +0.2 2,322,331 - A4249_RS11535 0.37 +0.4 2,322,331 - A4249_RS11535 0.37 -0.1 2,322,465 + A4249_RS11535 0.52 -1.5 2,322,465 + A4249_RS11535 0.52 -0.1 2,322,465 + A4249_RS11535 0.52 -0.0 2,322,465 + A4249_RS11535 0.52 -0.0 2,322,465 + A4249_RS11535 0.52 +0.5 2,322,465 + A4249_RS11535 0.52 +1.4 2,322,465 + A4249_RS11535 0.52 -0.3 2,322,465 + A4249_RS11535 0.52 +0.6 2,322,466 - A4249_RS11535 0.52 +0.0 2,322,466 - A4249_RS11535 0.52 -0.1 2,322,466 - A4249_RS11535 0.52 +0.3 2,322,466 - A4249_RS11535 0.52 -0.2 2,322,513 + A4249_RS11535 0.58 -0.4 2,322,513 + A4249_RS11535 0.58 +0.8 2,322,514 - A4249_RS11535 0.58 -0.4 2,322,627 + A4249_RS11535 0.70 +0.2 2,322,628 - A4249_RS11535 0.70 +0.3 2,322,628 - A4249_RS11535 0.70 -1.5 2,322,628 - A4249_RS11535 0.70 -0.1 2,322,780 + A4249_RS11535 0.87 -0.4 2,322,780 + A4249_RS11535 0.87 +0.1 2,322,780 + A4249_RS11535 0.87 -0.1 2,322,780 + A4249_RS11535 0.87 +1.3 2,322,781 - A4249_RS11535 0.87 -0.4 2,322,843 + +0.2 2,322,843 + -1.0 2,322,843 + -1.0 2,322,844 - -0.3 2,322,844 - +0.2 2,322,983 + A4249_RS11540 0.12 -0.4 2,322,983 + A4249_RS11540 0.12 -0.4 2,322,984 - A4249_RS11540 0.12 -1.0 2,323,031 + A4249_RS11540 0.18 +1.0 2,323,031 + A4249_RS11540 0.18 +0.2 2,323,031 + A4249_RS11540 0.18 +1.2 2,323,031 + A4249_RS11540 0.18 +0.2 2,323,032 - A4249_RS11540 0.18 -1.1 2,323,032 - A4249_RS11540 0.18 +1.6 2,323,032 - A4249_RS11540 0.18 -0.4 2,323,032 - A4249_RS11540 0.18 +0.2 2,323,202 + A4249_RS11540 0.40 -0.9 2,323,394 + A4249_RS11540 0.65 -1.1 2,323,394 + A4249_RS11540 0.65 -0.3 2,323,394 + A4249_RS11540 0.65 +0.5 2,323,394 + A4249_RS11540 0.65 -0.2 2,323,395 - A4249_RS11540 0.65 +0.0 2,323,395 - A4249_RS11540 0.65 -0.4 2,323,533 - A4249_RS11540 0.83 +0.3 2,323,596 + -1.4 2,323,596 + +0.3 2,323,596 + -1.0 2,323,597 - +0.5 2,323,664 + -0.0 2,323,664 + -0.8 2,323,664 + +0.0 2,323,665 - +0.3 2,323,665 - -0.3 2,323,665 - -0.1 2,323,675 + -0.1 2,323,675 + +0.8 2,323,676 - -0.2 2,323,811 - -0.4 2,323,838 - -1.4 2,323,838 - -0.8 2,323,838 - +0.0
Or see this region's nucleotide sequence