Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS11515

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS11505 and A4249_RS11510 are separated by 23 nucleotidesA4249_RS11510 and A4249_RS11515 are separated by 8 nucleotidesA4249_RS11515 and A4249_RS11520 are separated by 11 nucleotidesA4249_RS11520 and A4249_RS11525 are separated by 29 nucleotides A4249_RS11505: A4249_RS11505 - TlpA disulfide reductase family protein, at 2,317,068 to 2,317,862 _RS11505 A4249_RS11510: A4249_RS11510 - DsbA family protein, at 2,317,886 to 2,318,560 _RS11510 A4249_RS11515: A4249_RS11515 - bifunctional metallophosphatase/5'-nucleotidase, at 2,318,569 to 2,319,996 _RS11515 A4249_RS11520: A4249_RS11520 - class I SAM-dependent methyltransferase, at 2,320,008 to 2,320,625 _RS11520 A4249_RS11525: A4249_RS11525 - DsrE family protein, at 2,320,655 to 2,321,179 _RS11525 Position (kb) 2318 2319 2320Strain fitness (log2 ratio) -2 -1 0 1at 2317.743 kb on + strand, within A4249_RS11505at 2317.744 kb on - strand, within A4249_RS11505at 2317.744 kb on - strand, within A4249_RS11505at 2318.108 kb on + strand, within A4249_RS11510at 2318.108 kb on + strand, within A4249_RS11510at 2318.109 kb on - strand, within A4249_RS11510at 2318.109 kb on - strand, within A4249_RS11510at 2318.109 kb on - strand, within A4249_RS11510at 2318.109 kb on - strand, within A4249_RS11510at 2318.109 kb on - strand, within A4249_RS11510at 2318.120 kb on + strand, within A4249_RS11510at 2318.121 kb on - strand, within A4249_RS11510at 2318.186 kb on + strand, within A4249_RS11510at 2318.186 kb on + strand, within A4249_RS11510at 2318.186 kb on + strand, within A4249_RS11510at 2318.186 kb on + strand, within A4249_RS11510at 2318.186 kb on + strand, within A4249_RS11510at 2318.186 kb on + strand, within A4249_RS11510at 2318.186 kb on + strand, within A4249_RS11510at 2318.187 kb on - strand, within A4249_RS11510at 2318.187 kb on - strand, within A4249_RS11510at 2318.187 kb on - strand, within A4249_RS11510at 2318.187 kb on - strand, within A4249_RS11510at 2318.187 kb on - strand, within A4249_RS11510at 2318.187 kb on - strand, within A4249_RS11510at 2318.187 kb on - strand, within A4249_RS11510at 2318.187 kb on - strand, within A4249_RS11510at 2318.187 kb on - strand, within A4249_RS11510at 2318.253 kb on - strand, within A4249_RS11510at 2318.264 kb on + strand, within A4249_RS11510at 2318.264 kb on + strand, within A4249_RS11510at 2318.264 kb on + strand, within A4249_RS11510at 2318.264 kb on + strand, within A4249_RS11510at 2318.264 kb on + strand, within A4249_RS11510at 2318.265 kb on - strand, within A4249_RS11510at 2318.265 kb on - strand, within A4249_RS11510at 2318.265 kb on - strand, within A4249_RS11510at 2318.265 kb on - strand, within A4249_RS11510at 2318.279 kb on - strand, within A4249_RS11510at 2318.279 kb on - strand, within A4249_RS11510at 2318.467 kb on + strand, within A4249_RS11510at 2318.467 kb on + strand, within A4249_RS11510at 2318.467 kb on + strand, within A4249_RS11510at 2318.468 kb on - strand, within A4249_RS11510at 2318.468 kb on - strand, within A4249_RS11510at 2318.468 kb on - strand, within A4249_RS11510at 2318.468 kb on - strand, within A4249_RS11510at 2318.533 kb on + strandat 2318.534 kb on - strandat 2319.211 kb on - strand, within A4249_RS11515at 2319.211 kb on - strand, within A4249_RS11515at 2319.211 kb on - strand, within A4249_RS11515at 2319.283 kb on + strand, within A4249_RS11515at 2319.283 kb on + strand, within A4249_RS11515at 2319.283 kb on + strand, within A4249_RS11515at 2319.283 kb on + strand, within A4249_RS11515at 2319.284 kb on - strand, within A4249_RS11515at 2319.347 kb on + strand, within A4249_RS11515at 2319.604 kb on + strand, within A4249_RS11515at 2319.604 kb on + strand, within A4249_RS11515at 2319.604 kb on + strand, within A4249_RS11515at 2319.604 kb on + strand, within A4249_RS11515at 2319.605 kb on - strand, within A4249_RS11515at 2319.605 kb on - strand, within A4249_RS11515at 2319.605 kb on - strand, within A4249_RS11515at 2319.605 kb on - strand, within A4249_RS11515at 2319.609 kb on + strand, within A4249_RS11515at 2319.609 kb on + strand, within A4249_RS11515at 2319.609 kb on + strand, within A4249_RS11515at 2319.609 kb on + strand, within A4249_RS11515at 2319.609 kb on + strand, within A4249_RS11515at 2319.610 kb on - strand, within A4249_RS11515at 2319.610 kb on - strand, within A4249_RS11515at 2319.610 kb on - strand, within A4249_RS11515at 2319.712 kb on + strand, within A4249_RS11515at 2319.713 kb on - strand, within A4249_RS11515at 2319.730 kb on + strand, within A4249_RS11515at 2319.730 kb on + strand, within A4249_RS11515at 2319.731 kb on - strand, within A4249_RS11515at 2319.731 kb on - strand, within A4249_RS11515at 2319.731 kb on - strand, within A4249_RS11515at 2319.841 kb on + strand, within A4249_RS11515at 2319.841 kb on + strand, within A4249_RS11515at 2319.841 kb on + strand, within A4249_RS11515at 2319.841 kb on + strand, within A4249_RS11515at 2319.842 kb on - strand, within A4249_RS11515at 2319.842 kb on - strand, within A4249_RS11515at 2319.842 kb on - strand, within A4249_RS11515at 2319.842 kb on - strand, within A4249_RS11515at 2319.842 kb on - strand, within A4249_RS11515at 2319.951 kb on + strandat 2319.951 kb on + strandat 2319.952 kb on - strandat 2319.952 kb on - strandat 2320.007 kb on + strandat 2320.007 kb on + strandat 2320.008 kb on - strandat 2320.047 kb on + strandat 2320.048 kb on - strandat 2320.048 kb on - strandat 2320.062 kb on + strandat 2320.062 kb on + strandat 2320.062 kb on + strandat 2320.063 kb on - strandat 2320.063 kb on - strandat 2320.385 kb on + strand, within A4249_RS11520at 2320.385 kb on + strand, within A4249_RS11520at 2320.385 kb on + strand, within A4249_RS11520at 2320.385 kb on + strand, within A4249_RS11520at 2320.385 kb on + strand, within A4249_RS11520at 2320.385 kb on + strand, within A4249_RS11520at 2320.386 kb on - strand, within A4249_RS11520at 2320.386 kb on - strand, within A4249_RS11520at 2320.386 kb on - strand, within A4249_RS11520at 2320.386 kb on - strand, within A4249_RS11520at 2320.386 kb on - strand, within A4249_RS11520at 2320.452 kb on + strand, within A4249_RS11520at 2320.488 kb on + strand, within A4249_RS11520at 2320.488 kb on + strand, within A4249_RS11520at 2320.489 kb on - strand, within A4249_RS11520at 2320.489 kb on - strand, within A4249_RS11520at 2320.790 kb on + strand, within A4249_RS11525at 2320.790 kb on + strand, within A4249_RS11525at 2320.791 kb on - strand, within A4249_RS11525at 2320.873 kb on + strand, within A4249_RS11525at 2320.873 kb on + strand, within A4249_RS11525at 2320.873 kb on + strand, within A4249_RS11525at 2320.873 kb on + strand, within A4249_RS11525at 2320.873 kb on + strand, within A4249_RS11525at 2320.874 kb on - strand, within A4249_RS11525at 2320.874 kb on - strand, within A4249_RS11525at 2320.874 kb on - strand, within A4249_RS11525

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,317,743 + A4249_RS11505 0.85 +0.7
2,317,744 - A4249_RS11505 0.85 +0.2
2,317,744 - A4249_RS11505 0.85 +0.2
2,318,108 + A4249_RS11510 0.33 -0.1
2,318,108 + A4249_RS11510 0.33 +0.2
2,318,109 - A4249_RS11510 0.33 +1.6
2,318,109 - A4249_RS11510 0.33 -0.2
2,318,109 - A4249_RS11510 0.33 -0.4
2,318,109 - A4249_RS11510 0.33 -0.3
2,318,109 - A4249_RS11510 0.33 -0.7
2,318,120 + A4249_RS11510 0.35 +0.4
2,318,121 - A4249_RS11510 0.35 +0.2
2,318,186 + A4249_RS11510 0.44 +0.2
2,318,186 + A4249_RS11510 0.44 +0.0
2,318,186 + A4249_RS11510 0.44 -0.6
2,318,186 + A4249_RS11510 0.44 +0.0
2,318,186 + A4249_RS11510 0.44 +0.5
2,318,186 + A4249_RS11510 0.44 -0.1
2,318,186 + A4249_RS11510 0.44 -0.2
2,318,187 - A4249_RS11510 0.45 +0.4
2,318,187 - A4249_RS11510 0.45 +0.6
2,318,187 - A4249_RS11510 0.45 +0.2
2,318,187 - A4249_RS11510 0.45 -0.0
2,318,187 - A4249_RS11510 0.45 +0.1
2,318,187 - A4249_RS11510 0.45 +0.2
2,318,187 - A4249_RS11510 0.45 +0.2
2,318,187 - A4249_RS11510 0.45 -0.7
2,318,187 - A4249_RS11510 0.45 +0.0
2,318,253 - A4249_RS11510 0.54 -2.4
2,318,264 + A4249_RS11510 0.56 -1.2
2,318,264 + A4249_RS11510 0.56 +0.5
2,318,264 + A4249_RS11510 0.56 +0.6
2,318,264 + A4249_RS11510 0.56 +0.3
2,318,264 + A4249_RS11510 0.56 -0.2
2,318,265 - A4249_RS11510 0.56 -0.3
2,318,265 - A4249_RS11510 0.56 -0.6
2,318,265 - A4249_RS11510 0.56 -0.4
2,318,265 - A4249_RS11510 0.56 -0.2
2,318,279 - A4249_RS11510 0.58 +0.1
2,318,279 - A4249_RS11510 0.58 +0.4
2,318,467 + A4249_RS11510 0.86 +0.8
2,318,467 + A4249_RS11510 0.86 +1.3
2,318,467 + A4249_RS11510 0.86 +0.1
2,318,468 - A4249_RS11510 0.86 +0.1
2,318,468 - A4249_RS11510 0.86 -0.2
2,318,468 - A4249_RS11510 0.86 +0.3
2,318,468 - A4249_RS11510 0.86 -0.9
2,318,533 + +0.7
2,318,534 - +0.4
2,319,211 - A4249_RS11515 0.45 -0.2
2,319,211 - A4249_RS11515 0.45 -0.2
2,319,211 - A4249_RS11515 0.45 +0.3
2,319,283 + A4249_RS11515 0.50 -0.8
2,319,283 + A4249_RS11515 0.50 +0.0
2,319,283 + A4249_RS11515 0.50 +0.2
2,319,283 + A4249_RS11515 0.50 +0.1
2,319,284 - A4249_RS11515 0.50 +0.3
2,319,347 + A4249_RS11515 0.54 -1.3
2,319,604 + A4249_RS11515 0.72 +0.7
2,319,604 + A4249_RS11515 0.72 +0.2
2,319,604 + A4249_RS11515 0.72 +0.5
2,319,604 + A4249_RS11515 0.72 +0.4
2,319,605 - A4249_RS11515 0.73 -0.2
2,319,605 - A4249_RS11515 0.73 -0.3
2,319,605 - A4249_RS11515 0.73 +0.7
2,319,605 - A4249_RS11515 0.73 +0.2
2,319,609 + A4249_RS11515 0.73 +0.4
2,319,609 + A4249_RS11515 0.73 +0.6
2,319,609 + A4249_RS11515 0.73 +1.1
2,319,609 + A4249_RS11515 0.73 -0.0
2,319,609 + A4249_RS11515 0.73 -0.3
2,319,610 - A4249_RS11515 0.73 -0.5
2,319,610 - A4249_RS11515 0.73 +0.3
2,319,610 - A4249_RS11515 0.73 -0.2
2,319,712 + A4249_RS11515 0.80 -0.1
2,319,713 - A4249_RS11515 0.80 +0.5
2,319,730 + A4249_RS11515 0.81 +0.1
2,319,730 + A4249_RS11515 0.81 -0.5
2,319,731 - A4249_RS11515 0.81 -0.0
2,319,731 - A4249_RS11515 0.81 +0.4
2,319,731 - A4249_RS11515 0.81 -0.4
2,319,841 + A4249_RS11515 0.89 +0.9
2,319,841 + A4249_RS11515 0.89 -0.1
2,319,841 + A4249_RS11515 0.89 -0.2
2,319,841 + A4249_RS11515 0.89 -0.2
2,319,842 - A4249_RS11515 0.89 +1.2
2,319,842 - A4249_RS11515 0.89 -0.4
2,319,842 - A4249_RS11515 0.89 -0.1
2,319,842 - A4249_RS11515 0.89 -0.3
2,319,842 - A4249_RS11515 0.89 +0.2
2,319,951 + +0.0
2,319,951 + -0.1
2,319,952 - -2.0
2,319,952 - -2.5
2,320,007 + +0.2
2,320,007 + +0.3
2,320,008 - -1.2
2,320,047 + +0.1
2,320,048 - -0.7
2,320,048 - +0.1
2,320,062 + -0.1
2,320,062 + +0.7
2,320,062 + -0.2
2,320,063 - -0.3
2,320,063 - -0.0
2,320,385 + A4249_RS11520 0.61 -0.4
2,320,385 + A4249_RS11520 0.61 -0.5
2,320,385 + A4249_RS11520 0.61 -0.1
2,320,385 + A4249_RS11520 0.61 -0.5
2,320,385 + A4249_RS11520 0.61 +0.3
2,320,385 + A4249_RS11520 0.61 +0.1
2,320,386 - A4249_RS11520 0.61 +0.4
2,320,386 - A4249_RS11520 0.61 -0.5
2,320,386 - A4249_RS11520 0.61 -0.6
2,320,386 - A4249_RS11520 0.61 +0.8
2,320,386 - A4249_RS11520 0.61 -0.4
2,320,452 + A4249_RS11520 0.72 +0.5
2,320,488 + A4249_RS11520 0.78 -0.3
2,320,488 + A4249_RS11520 0.78 -0.0
2,320,489 - A4249_RS11520 0.78 +0.3
2,320,489 - A4249_RS11520 0.78 -0.4
2,320,790 + A4249_RS11525 0.26 +0.9
2,320,790 + A4249_RS11525 0.26 -0.3
2,320,791 - A4249_RS11525 0.26 -0.4
2,320,873 + A4249_RS11525 0.42 -0.9
2,320,873 + A4249_RS11525 0.42 -0.3
2,320,873 + A4249_RS11525 0.42 +0.1
2,320,873 + A4249_RS11525 0.42 -0.1
2,320,873 + A4249_RS11525 0.42 -0.2
2,320,874 - A4249_RS11525 0.42 +0.4
2,320,874 - A4249_RS11525 0.42 -0.3
2,320,874 - A4249_RS11525 0.42 -0.8

Or see this region's nucleotide sequence