Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS11510

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS11500 and A4249_RS11505 overlap by 4 nucleotidesA4249_RS11505 and A4249_RS11510 are separated by 23 nucleotidesA4249_RS11510 and A4249_RS11515 are separated by 8 nucleotides A4249_RS11500: A4249_RS11500 - protein-disulfide reductase DsbD, at 2,315,173 to 2,317,071 _RS11500 A4249_RS11505: A4249_RS11505 - TlpA disulfide reductase family protein, at 2,317,068 to 2,317,862 _RS11505 A4249_RS11510: A4249_RS11510 - DsbA family protein, at 2,317,886 to 2,318,560 _RS11510 A4249_RS11515: A4249_RS11515 - bifunctional metallophosphatase/5'-nucleotidase, at 2,318,569 to 2,319,996 _RS11515 Position (kb) 2317 2318 2319Strain fitness (log2 ratio) -2 -1 0 1at 2317.207 kb on + strand, within A4249_RS11505at 2317.207 kb on + strand, within A4249_RS11505at 2317.207 kb on + strand, within A4249_RS11505at 2317.207 kb on + strand, within A4249_RS11505at 2317.208 kb on - strand, within A4249_RS11505at 2317.208 kb on - strand, within A4249_RS11505at 2317.208 kb on - strand, within A4249_RS11505at 2317.264 kb on - strand, within A4249_RS11505at 2317.264 kb on - strand, within A4249_RS11505at 2317.535 kb on + strand, within A4249_RS11505at 2317.743 kb on + strand, within A4249_RS11505at 2317.744 kb on - strand, within A4249_RS11505at 2317.744 kb on - strand, within A4249_RS11505at 2318.108 kb on + strand, within A4249_RS11510at 2318.108 kb on + strand, within A4249_RS11510at 2318.109 kb on - strand, within A4249_RS11510at 2318.109 kb on - strand, within A4249_RS11510at 2318.109 kb on - strand, within A4249_RS11510at 2318.109 kb on - strand, within A4249_RS11510at 2318.109 kb on - strand, within A4249_RS11510at 2318.120 kb on + strand, within A4249_RS11510at 2318.121 kb on - strand, within A4249_RS11510at 2318.186 kb on + strand, within A4249_RS11510at 2318.186 kb on + strand, within A4249_RS11510at 2318.186 kb on + strand, within A4249_RS11510at 2318.186 kb on + strand, within A4249_RS11510at 2318.186 kb on + strand, within A4249_RS11510at 2318.186 kb on + strand, within A4249_RS11510at 2318.186 kb on + strand, within A4249_RS11510at 2318.187 kb on - strand, within A4249_RS11510at 2318.187 kb on - strand, within A4249_RS11510at 2318.187 kb on - strand, within A4249_RS11510at 2318.187 kb on - strand, within A4249_RS11510at 2318.187 kb on - strand, within A4249_RS11510at 2318.187 kb on - strand, within A4249_RS11510at 2318.187 kb on - strand, within A4249_RS11510at 2318.187 kb on - strand, within A4249_RS11510at 2318.187 kb on - strand, within A4249_RS11510at 2318.253 kb on - strand, within A4249_RS11510at 2318.264 kb on + strand, within A4249_RS11510at 2318.264 kb on + strand, within A4249_RS11510at 2318.264 kb on + strand, within A4249_RS11510at 2318.264 kb on + strand, within A4249_RS11510at 2318.264 kb on + strand, within A4249_RS11510at 2318.265 kb on - strand, within A4249_RS11510at 2318.265 kb on - strand, within A4249_RS11510at 2318.265 kb on - strand, within A4249_RS11510at 2318.265 kb on - strand, within A4249_RS11510at 2318.279 kb on - strand, within A4249_RS11510at 2318.279 kb on - strand, within A4249_RS11510at 2318.467 kb on + strand, within A4249_RS11510at 2318.467 kb on + strand, within A4249_RS11510at 2318.467 kb on + strand, within A4249_RS11510at 2318.468 kb on - strand, within A4249_RS11510at 2318.468 kb on - strand, within A4249_RS11510at 2318.468 kb on - strand, within A4249_RS11510at 2318.468 kb on - strand, within A4249_RS11510at 2318.533 kb on + strandat 2318.534 kb on - strandat 2319.211 kb on - strand, within A4249_RS11515at 2319.211 kb on - strand, within A4249_RS11515at 2319.211 kb on - strand, within A4249_RS11515at 2319.283 kb on + strand, within A4249_RS11515at 2319.283 kb on + strand, within A4249_RS11515at 2319.283 kb on + strand, within A4249_RS11515at 2319.283 kb on + strand, within A4249_RS11515at 2319.284 kb on - strand, within A4249_RS11515at 2319.347 kb on + strand, within A4249_RS11515

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,317,207 + A4249_RS11505 0.17 -0.3
2,317,207 + A4249_RS11505 0.17 -0.5
2,317,207 + A4249_RS11505 0.17 +0.2
2,317,207 + A4249_RS11505 0.17 -1.2
2,317,208 - A4249_RS11505 0.18 -0.2
2,317,208 - A4249_RS11505 0.18 +0.4
2,317,208 - A4249_RS11505 0.18 -0.1
2,317,264 - A4249_RS11505 0.25 +0.8
2,317,264 - A4249_RS11505 0.25 -0.0
2,317,535 + A4249_RS11505 0.59 +0.5
2,317,743 + A4249_RS11505 0.85 +0.7
2,317,744 - A4249_RS11505 0.85 +0.2
2,317,744 - A4249_RS11505 0.85 +0.2
2,318,108 + A4249_RS11510 0.33 -0.1
2,318,108 + A4249_RS11510 0.33 +0.2
2,318,109 - A4249_RS11510 0.33 +1.6
2,318,109 - A4249_RS11510 0.33 -0.2
2,318,109 - A4249_RS11510 0.33 -0.4
2,318,109 - A4249_RS11510 0.33 -0.3
2,318,109 - A4249_RS11510 0.33 -0.7
2,318,120 + A4249_RS11510 0.35 +0.4
2,318,121 - A4249_RS11510 0.35 +0.2
2,318,186 + A4249_RS11510 0.44 +0.2
2,318,186 + A4249_RS11510 0.44 +0.0
2,318,186 + A4249_RS11510 0.44 -0.6
2,318,186 + A4249_RS11510 0.44 +0.0
2,318,186 + A4249_RS11510 0.44 +0.5
2,318,186 + A4249_RS11510 0.44 -0.1
2,318,186 + A4249_RS11510 0.44 -0.2
2,318,187 - A4249_RS11510 0.45 +0.4
2,318,187 - A4249_RS11510 0.45 +0.6
2,318,187 - A4249_RS11510 0.45 +0.2
2,318,187 - A4249_RS11510 0.45 -0.0
2,318,187 - A4249_RS11510 0.45 +0.1
2,318,187 - A4249_RS11510 0.45 +0.2
2,318,187 - A4249_RS11510 0.45 +0.2
2,318,187 - A4249_RS11510 0.45 -0.7
2,318,187 - A4249_RS11510 0.45 +0.0
2,318,253 - A4249_RS11510 0.54 -2.4
2,318,264 + A4249_RS11510 0.56 -1.2
2,318,264 + A4249_RS11510 0.56 +0.5
2,318,264 + A4249_RS11510 0.56 +0.6
2,318,264 + A4249_RS11510 0.56 +0.3
2,318,264 + A4249_RS11510 0.56 -0.2
2,318,265 - A4249_RS11510 0.56 -0.3
2,318,265 - A4249_RS11510 0.56 -0.6
2,318,265 - A4249_RS11510 0.56 -0.4
2,318,265 - A4249_RS11510 0.56 -0.2
2,318,279 - A4249_RS11510 0.58 +0.1
2,318,279 - A4249_RS11510 0.58 +0.4
2,318,467 + A4249_RS11510 0.86 +0.8
2,318,467 + A4249_RS11510 0.86 +1.3
2,318,467 + A4249_RS11510 0.86 +0.1
2,318,468 - A4249_RS11510 0.86 +0.1
2,318,468 - A4249_RS11510 0.86 -0.2
2,318,468 - A4249_RS11510 0.86 +0.3
2,318,468 - A4249_RS11510 0.86 -0.9
2,318,533 + +0.7
2,318,534 - +0.4
2,319,211 - A4249_RS11515 0.45 -0.2
2,319,211 - A4249_RS11515 0.45 -0.2
2,319,211 - A4249_RS11515 0.45 +0.3
2,319,283 + A4249_RS11515 0.50 -0.8
2,319,283 + A4249_RS11515 0.50 +0.0
2,319,283 + A4249_RS11515 0.50 +0.2
2,319,283 + A4249_RS11515 0.50 +0.1
2,319,284 - A4249_RS11515 0.50 +0.3
2,319,347 + A4249_RS11515 0.54 -1.3

Or see this region's nucleotide sequence