Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS11500 and A4249_RS11505 overlap by 4 nucleotides A4249_RS11505 and A4249_RS11510 are separated by 23 nucleotides A4249_RS11510 and A4249_RS11515 are separated by 8 nucleotides
A4249_RS11500: A4249_RS11500 - protein-disulfide reductase DsbD, at 2,315,173 to 2,317,071
_RS11500
A4249_RS11505: A4249_RS11505 - TlpA disulfide reductase family protein, at 2,317,068 to 2,317,862
_RS11505
A4249_RS11510: A4249_RS11510 - DsbA family protein, at 2,317,886 to 2,318,560
_RS11510
A4249_RS11515: A4249_RS11515 - bifunctional metallophosphatase/5'-nucleotidase, at 2,318,569 to 2,319,996
_RS11515
Position (kb)
2317
2318
2319 Strain fitness (log2 ratio)
-2
-1
0
1 at 2317.207 kb on + strand, within A4249_RS11505 at 2317.207 kb on + strand, within A4249_RS11505 at 2317.207 kb on + strand, within A4249_RS11505 at 2317.207 kb on + strand, within A4249_RS11505 at 2317.208 kb on - strand, within A4249_RS11505 at 2317.208 kb on - strand, within A4249_RS11505 at 2317.208 kb on - strand, within A4249_RS11505 at 2317.264 kb on - strand, within A4249_RS11505 at 2317.264 kb on - strand, within A4249_RS11505 at 2317.535 kb on + strand, within A4249_RS11505 at 2317.743 kb on + strand, within A4249_RS11505 at 2317.744 kb on - strand, within A4249_RS11505 at 2317.744 kb on - strand, within A4249_RS11505 at 2318.108 kb on + strand, within A4249_RS11510 at 2318.108 kb on + strand, within A4249_RS11510 at 2318.109 kb on - strand, within A4249_RS11510 at 2318.109 kb on - strand, within A4249_RS11510 at 2318.109 kb on - strand, within A4249_RS11510 at 2318.109 kb on - strand, within A4249_RS11510 at 2318.109 kb on - strand, within A4249_RS11510 at 2318.120 kb on + strand, within A4249_RS11510 at 2318.121 kb on - strand, within A4249_RS11510 at 2318.186 kb on + strand, within A4249_RS11510 at 2318.186 kb on + strand, within A4249_RS11510 at 2318.186 kb on + strand, within A4249_RS11510 at 2318.186 kb on + strand, within A4249_RS11510 at 2318.186 kb on + strand, within A4249_RS11510 at 2318.186 kb on + strand, within A4249_RS11510 at 2318.186 kb on + strand, within A4249_RS11510 at 2318.187 kb on - strand, within A4249_RS11510 at 2318.187 kb on - strand, within A4249_RS11510 at 2318.187 kb on - strand, within A4249_RS11510 at 2318.187 kb on - strand, within A4249_RS11510 at 2318.187 kb on - strand, within A4249_RS11510 at 2318.187 kb on - strand, within A4249_RS11510 at 2318.187 kb on - strand, within A4249_RS11510 at 2318.187 kb on - strand, within A4249_RS11510 at 2318.187 kb on - strand, within A4249_RS11510 at 2318.253 kb on - strand, within A4249_RS11510 at 2318.264 kb on + strand, within A4249_RS11510 at 2318.264 kb on + strand, within A4249_RS11510 at 2318.264 kb on + strand, within A4249_RS11510 at 2318.264 kb on + strand, within A4249_RS11510 at 2318.264 kb on + strand, within A4249_RS11510 at 2318.265 kb on - strand, within A4249_RS11510 at 2318.265 kb on - strand, within A4249_RS11510 at 2318.265 kb on - strand, within A4249_RS11510 at 2318.265 kb on - strand, within A4249_RS11510 at 2318.279 kb on - strand, within A4249_RS11510 at 2318.279 kb on - strand, within A4249_RS11510 at 2318.467 kb on + strand, within A4249_RS11510 at 2318.467 kb on + strand, within A4249_RS11510 at 2318.467 kb on + strand, within A4249_RS11510 at 2318.468 kb on - strand, within A4249_RS11510 at 2318.468 kb on - strand, within A4249_RS11510 at 2318.468 kb on - strand, within A4249_RS11510 at 2318.468 kb on - strand, within A4249_RS11510 at 2318.533 kb on + strand at 2318.534 kb on - strand at 2319.211 kb on - strand, within A4249_RS11515 at 2319.211 kb on - strand, within A4249_RS11515 at 2319.211 kb on - strand, within A4249_RS11515 at 2319.283 kb on + strand, within A4249_RS11515 at 2319.283 kb on + strand, within A4249_RS11515 at 2319.283 kb on + strand, within A4249_RS11515 at 2319.283 kb on + strand, within A4249_RS11515 at 2319.284 kb on - strand, within A4249_RS11515 at 2319.347 kb on + strand, within A4249_RS11515
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,317,207 + A4249_RS11505 0.17 -0.3 2,317,207 + A4249_RS11505 0.17 -0.5 2,317,207 + A4249_RS11505 0.17 +0.2 2,317,207 + A4249_RS11505 0.17 -1.2 2,317,208 - A4249_RS11505 0.18 -0.2 2,317,208 - A4249_RS11505 0.18 +0.4 2,317,208 - A4249_RS11505 0.18 -0.1 2,317,264 - A4249_RS11505 0.25 +0.8 2,317,264 - A4249_RS11505 0.25 -0.0 2,317,535 + A4249_RS11505 0.59 +0.5 2,317,743 + A4249_RS11505 0.85 +0.7 2,317,744 - A4249_RS11505 0.85 +0.2 2,317,744 - A4249_RS11505 0.85 +0.2 2,318,108 + A4249_RS11510 0.33 -0.1 2,318,108 + A4249_RS11510 0.33 +0.2 2,318,109 - A4249_RS11510 0.33 +1.6 2,318,109 - A4249_RS11510 0.33 -0.2 2,318,109 - A4249_RS11510 0.33 -0.4 2,318,109 - A4249_RS11510 0.33 -0.3 2,318,109 - A4249_RS11510 0.33 -0.7 2,318,120 + A4249_RS11510 0.35 +0.4 2,318,121 - A4249_RS11510 0.35 +0.2 2,318,186 + A4249_RS11510 0.44 +0.2 2,318,186 + A4249_RS11510 0.44 +0.0 2,318,186 + A4249_RS11510 0.44 -0.6 2,318,186 + A4249_RS11510 0.44 +0.0 2,318,186 + A4249_RS11510 0.44 +0.5 2,318,186 + A4249_RS11510 0.44 -0.1 2,318,186 + A4249_RS11510 0.44 -0.2 2,318,187 - A4249_RS11510 0.45 +0.4 2,318,187 - A4249_RS11510 0.45 +0.6 2,318,187 - A4249_RS11510 0.45 +0.2 2,318,187 - A4249_RS11510 0.45 -0.0 2,318,187 - A4249_RS11510 0.45 +0.1 2,318,187 - A4249_RS11510 0.45 +0.2 2,318,187 - A4249_RS11510 0.45 +0.2 2,318,187 - A4249_RS11510 0.45 -0.7 2,318,187 - A4249_RS11510 0.45 +0.0 2,318,253 - A4249_RS11510 0.54 -2.4 2,318,264 + A4249_RS11510 0.56 -1.2 2,318,264 + A4249_RS11510 0.56 +0.5 2,318,264 + A4249_RS11510 0.56 +0.6 2,318,264 + A4249_RS11510 0.56 +0.3 2,318,264 + A4249_RS11510 0.56 -0.2 2,318,265 - A4249_RS11510 0.56 -0.3 2,318,265 - A4249_RS11510 0.56 -0.6 2,318,265 - A4249_RS11510 0.56 -0.4 2,318,265 - A4249_RS11510 0.56 -0.2 2,318,279 - A4249_RS11510 0.58 +0.1 2,318,279 - A4249_RS11510 0.58 +0.4 2,318,467 + A4249_RS11510 0.86 +0.8 2,318,467 + A4249_RS11510 0.86 +1.3 2,318,467 + A4249_RS11510 0.86 +0.1 2,318,468 - A4249_RS11510 0.86 +0.1 2,318,468 - A4249_RS11510 0.86 -0.2 2,318,468 - A4249_RS11510 0.86 +0.3 2,318,468 - A4249_RS11510 0.86 -0.9 2,318,533 + +0.7 2,318,534 - +0.4 2,319,211 - A4249_RS11515 0.45 -0.2 2,319,211 - A4249_RS11515 0.45 -0.2 2,319,211 - A4249_RS11515 0.45 +0.3 2,319,283 + A4249_RS11515 0.50 -0.8 2,319,283 + A4249_RS11515 0.50 +0.0 2,319,283 + A4249_RS11515 0.50 +0.2 2,319,283 + A4249_RS11515 0.50 +0.1 2,319,284 - A4249_RS11515 0.50 +0.3 2,319,347 + A4249_RS11515 0.54 -1.3
Or see this region's nucleotide sequence