Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS11225 and A4249_RS11230 are separated by 63 nucleotides A4249_RS11230 and A4249_RS11235 are separated by 54 nucleotides A4249_RS11235 and A4249_RS11240 are separated by 12 nucleotides A4249_RS11240 and A4249_RS11245 are separated by 61 nucleotides
A4249_RS11225: A4249_RS11225 - fumarylacetoacetate hydrolase family protein, at 2,260,339 to 2,261,358
_RS11225
A4249_RS11230: A4249_RS11230 - DUF1453 family protein, at 2,261,422 to 2,261,958
_RS11230
A4249_RS11235: A4249_RS11235 - tRNA-Leu, at 2,262,013 to 2,262,097
_RS11235
A4249_RS11240: A4249_RS11240 - alpha/beta hydrolase, at 2,262,110 to 2,262,961
_RS11240
A4249_RS11245: A4249_RS11245 - AsmA family protein, at 2,263,023 to 2,264,993
_RS11245
Position (kb)
2262
2263 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2261.365 kb on + strand at 2261.365 kb on + strand at 2261.366 kb on - strand at 2261.896 kb on + strand, within A4249_RS11230 at 2261.896 kb on + strand, within A4249_RS11230 at 2261.896 kb on + strand, within A4249_RS11230 at 2261.896 kb on + strand, within A4249_RS11230 at 2261.896 kb on + strand, within A4249_RS11230 at 2261.896 kb on + strand, within A4249_RS11230 at 2261.896 kb on + strand, within A4249_RS11230 at 2261.897 kb on - strand, within A4249_RS11230 at 2261.897 kb on - strand, within A4249_RS11230 at 2261.897 kb on - strand, within A4249_RS11230 at 2261.897 kb on - strand, within A4249_RS11230 at 2261.897 kb on - strand, within A4249_RS11230 at 2262.220 kb on - strand, within A4249_RS11240 at 2262.432 kb on + strand, within A4249_RS11240 at 2262.432 kb on + strand, within A4249_RS11240 at 2262.433 kb on - strand, within A4249_RS11240 at 2262.490 kb on + strand, within A4249_RS11240 at 2262.490 kb on + strand, within A4249_RS11240 at 2262.490 kb on + strand, within A4249_RS11240 at 2262.490 kb on + strand, within A4249_RS11240 at 2262.491 kb on - strand, within A4249_RS11240 at 2262.491 kb on - strand, within A4249_RS11240 at 2262.492 kb on + strand, within A4249_RS11240 at 2262.492 kb on + strand, within A4249_RS11240 at 2262.492 kb on + strand, within A4249_RS11240 at 2262.492 kb on + strand, within A4249_RS11240 at 2262.492 kb on + strand, within A4249_RS11240 at 2262.493 kb on - strand, within A4249_RS11240 at 2262.493 kb on - strand, within A4249_RS11240 at 2262.493 kb on - strand, within A4249_RS11240 at 2262.493 kb on - strand, within A4249_RS11240 at 2262.493 kb on - strand, within A4249_RS11240 at 2262.493 kb on - strand, within A4249_RS11240 at 2262.493 kb on - strand, within A4249_RS11240 at 2262.493 kb on - strand, within A4249_RS11240 at 2262.577 kb on - strand, within A4249_RS11240 at 2262.577 kb on - strand, within A4249_RS11240 at 2262.577 kb on - strand, within A4249_RS11240 at 2262.663 kb on + strand, within A4249_RS11240 at 2262.721 kb on - strand, within A4249_RS11240 at 2262.721 kb on - strand, within A4249_RS11240 at 2262.721 kb on - strand, within A4249_RS11240 at 2262.756 kb on + strand, within A4249_RS11240 at 2262.756 kb on + strand, within A4249_RS11240 at 2262.802 kb on - strand, within A4249_RS11240 at 2262.834 kb on + strand, within A4249_RS11240 at 2262.841 kb on + strand, within A4249_RS11240 at 2262.985 kb on + strand at 2262.985 kb on + strand at 2262.985 kb on + strand at 2262.985 kb on + strand at 2262.985 kb on + strand at 2262.985 kb on + strand at 2262.985 kb on + strand at 2262.985 kb on + strand at 2262.985 kb on + strand at 2262.986 kb on - strand at 2262.986 kb on - strand at 2262.986 kb on - strand at 2262.986 kb on - strand at 2262.986 kb on - strand at 2262.986 kb on - strand at 2262.986 kb on - strand at 2262.986 kb on - strand at 2262.986 kb on - strand at 2263.021 kb on + strand at 2263.021 kb on + strand at 2263.021 kb on + strand at 2263.022 kb on - strand at 2263.022 kb on - strand at 2263.022 kb on - strand at 2263.022 kb on - strand at 2263.022 kb on - strand at 2263.022 kb on - strand at 2263.022 kb on - strand at 2263.022 kb on - strand at 2263.022 kb on - strand at 2263.663 kb on + strand, within A4249_RS11245 at 2263.664 kb on - strand, within A4249_RS11245 at 2263.664 kb on - strand, within A4249_RS11245 at 2263.826 kb on - strand, within A4249_RS11245 at 2263.835 kb on + strand, within A4249_RS11245
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,261,365 + +0.0 2,261,365 + -0.3 2,261,366 - -0.3 2,261,896 + A4249_RS11230 0.88 +0.1 2,261,896 + A4249_RS11230 0.88 +0.1 2,261,896 + A4249_RS11230 0.88 +0.0 2,261,896 + A4249_RS11230 0.88 -0.4 2,261,896 + A4249_RS11230 0.88 -0.1 2,261,896 + A4249_RS11230 0.88 +0.3 2,261,896 + A4249_RS11230 0.88 +0.3 2,261,897 - A4249_RS11230 0.88 +0.3 2,261,897 - A4249_RS11230 0.88 -2.2 2,261,897 - A4249_RS11230 0.88 -0.4 2,261,897 - A4249_RS11230 0.88 +0.0 2,261,897 - A4249_RS11230 0.88 -0.2 2,262,220 - A4249_RS11240 0.13 -1.7 2,262,432 + A4249_RS11240 0.38 -1.1 2,262,432 + A4249_RS11240 0.38 +0.0 2,262,433 - A4249_RS11240 0.38 +0.1 2,262,490 + A4249_RS11240 0.45 -1.2 2,262,490 + A4249_RS11240 0.45 -1.0 2,262,490 + A4249_RS11240 0.45 -0.1 2,262,490 + A4249_RS11240 0.45 -0.5 2,262,491 - A4249_RS11240 0.45 -0.6 2,262,491 - A4249_RS11240 0.45 +0.1 2,262,492 + A4249_RS11240 0.45 -0.9 2,262,492 + A4249_RS11240 0.45 -0.9 2,262,492 + A4249_RS11240 0.45 -0.3 2,262,492 + A4249_RS11240 0.45 -0.6 2,262,492 + A4249_RS11240 0.45 +0.6 2,262,493 - A4249_RS11240 0.45 -0.1 2,262,493 - A4249_RS11240 0.45 +0.1 2,262,493 - A4249_RS11240 0.45 -0.2 2,262,493 - A4249_RS11240 0.45 -1.0 2,262,493 - A4249_RS11240 0.45 -0.3 2,262,493 - A4249_RS11240 0.45 -0.4 2,262,493 - A4249_RS11240 0.45 -0.3 2,262,493 - A4249_RS11240 0.45 -0.2 2,262,577 - A4249_RS11240 0.55 +1.8 2,262,577 - A4249_RS11240 0.55 -2.0 2,262,577 - A4249_RS11240 0.55 +0.6 2,262,663 + A4249_RS11240 0.65 +0.2 2,262,721 - A4249_RS11240 0.72 -2.4 2,262,721 - A4249_RS11240 0.72 -1.0 2,262,721 - A4249_RS11240 0.72 -0.7 2,262,756 + A4249_RS11240 0.76 +0.5 2,262,756 + A4249_RS11240 0.76 +0.4 2,262,802 - A4249_RS11240 0.81 +0.1 2,262,834 + A4249_RS11240 0.85 +0.0 2,262,841 + A4249_RS11240 0.86 -0.2 2,262,985 + -0.0 2,262,985 + -0.9 2,262,985 + -0.1 2,262,985 + +0.1 2,262,985 + -0.6 2,262,985 + +0.6 2,262,985 + -0.9 2,262,985 + -1.2 2,262,985 + -1.1 2,262,986 - +0.3 2,262,986 - +0.3 2,262,986 - +0.1 2,262,986 - -0.6 2,262,986 - +0.3 2,262,986 - +0.8 2,262,986 - +0.1 2,262,986 - +0.1 2,262,986 - -0.4 2,263,021 + -0.4 2,263,021 + +0.5 2,263,021 + +0.3 2,263,022 - +0.3 2,263,022 - +0.1 2,263,022 - -0.6 2,263,022 - +0.2 2,263,022 - -0.1 2,263,022 - -0.4 2,263,022 - -1.0 2,263,022 - -0.0 2,263,022 - -0.4 2,263,663 + A4249_RS11245 0.32 -0.6 2,263,664 - A4249_RS11245 0.33 -0.4 2,263,664 - A4249_RS11245 0.33 -0.1 2,263,826 - A4249_RS11245 0.41 -0.2 2,263,835 + A4249_RS11245 0.41 -0.0
Or see this region's nucleotide sequence