Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS11240

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS11225 and A4249_RS11230 are separated by 63 nucleotidesA4249_RS11230 and A4249_RS11235 are separated by 54 nucleotidesA4249_RS11235 and A4249_RS11240 are separated by 12 nucleotidesA4249_RS11240 and A4249_RS11245 are separated by 61 nucleotides A4249_RS11225: A4249_RS11225 - fumarylacetoacetate hydrolase family protein, at 2,260,339 to 2,261,358 _RS11225 A4249_RS11230: A4249_RS11230 - DUF1453 family protein, at 2,261,422 to 2,261,958 _RS11230 A4249_RS11235: A4249_RS11235 - tRNA-Leu, at 2,262,013 to 2,262,097 _RS11235 A4249_RS11240: A4249_RS11240 - alpha/beta hydrolase, at 2,262,110 to 2,262,961 _RS11240 A4249_RS11245: A4249_RS11245 - AsmA family protein, at 2,263,023 to 2,264,993 _RS11245 Position (kb) 2262 2263Strain fitness (log2 ratio) -2 -1 0 1 2at 2261.365 kb on + strandat 2261.365 kb on + strandat 2261.366 kb on - strandat 2261.896 kb on + strand, within A4249_RS11230at 2261.896 kb on + strand, within A4249_RS11230at 2261.896 kb on + strand, within A4249_RS11230at 2261.896 kb on + strand, within A4249_RS11230at 2261.896 kb on + strand, within A4249_RS11230at 2261.896 kb on + strand, within A4249_RS11230at 2261.896 kb on + strand, within A4249_RS11230at 2261.897 kb on - strand, within A4249_RS11230at 2261.897 kb on - strand, within A4249_RS11230at 2261.897 kb on - strand, within A4249_RS11230at 2261.897 kb on - strand, within A4249_RS11230at 2261.897 kb on - strand, within A4249_RS11230at 2262.220 kb on - strand, within A4249_RS11240at 2262.432 kb on + strand, within A4249_RS11240at 2262.432 kb on + strand, within A4249_RS11240at 2262.433 kb on - strand, within A4249_RS11240at 2262.490 kb on + strand, within A4249_RS11240at 2262.490 kb on + strand, within A4249_RS11240at 2262.490 kb on + strand, within A4249_RS11240at 2262.490 kb on + strand, within A4249_RS11240at 2262.491 kb on - strand, within A4249_RS11240at 2262.491 kb on - strand, within A4249_RS11240at 2262.492 kb on + strand, within A4249_RS11240at 2262.492 kb on + strand, within A4249_RS11240at 2262.492 kb on + strand, within A4249_RS11240at 2262.492 kb on + strand, within A4249_RS11240at 2262.492 kb on + strand, within A4249_RS11240at 2262.493 kb on - strand, within A4249_RS11240at 2262.493 kb on - strand, within A4249_RS11240at 2262.493 kb on - strand, within A4249_RS11240at 2262.493 kb on - strand, within A4249_RS11240at 2262.493 kb on - strand, within A4249_RS11240at 2262.493 kb on - strand, within A4249_RS11240at 2262.493 kb on - strand, within A4249_RS11240at 2262.493 kb on - strand, within A4249_RS11240at 2262.577 kb on - strand, within A4249_RS11240at 2262.577 kb on - strand, within A4249_RS11240at 2262.577 kb on - strand, within A4249_RS11240at 2262.663 kb on + strand, within A4249_RS11240at 2262.721 kb on - strand, within A4249_RS11240at 2262.721 kb on - strand, within A4249_RS11240at 2262.721 kb on - strand, within A4249_RS11240at 2262.756 kb on + strand, within A4249_RS11240at 2262.756 kb on + strand, within A4249_RS11240at 2262.802 kb on - strand, within A4249_RS11240at 2262.834 kb on + strand, within A4249_RS11240at 2262.841 kb on + strand, within A4249_RS11240at 2262.985 kb on + strandat 2262.985 kb on + strandat 2262.985 kb on + strandat 2262.985 kb on + strandat 2262.985 kb on + strandat 2262.985 kb on + strandat 2262.985 kb on + strandat 2262.985 kb on + strandat 2262.985 kb on + strandat 2262.986 kb on - strandat 2262.986 kb on - strandat 2262.986 kb on - strandat 2262.986 kb on - strandat 2262.986 kb on - strandat 2262.986 kb on - strandat 2262.986 kb on - strandat 2262.986 kb on - strandat 2262.986 kb on - strandat 2263.021 kb on + strandat 2263.021 kb on + strandat 2263.021 kb on + strandat 2263.022 kb on - strandat 2263.022 kb on - strandat 2263.022 kb on - strandat 2263.022 kb on - strandat 2263.022 kb on - strandat 2263.022 kb on - strandat 2263.022 kb on - strandat 2263.022 kb on - strandat 2263.022 kb on - strandat 2263.663 kb on + strand, within A4249_RS11245at 2263.664 kb on - strand, within A4249_RS11245at 2263.664 kb on - strand, within A4249_RS11245at 2263.826 kb on - strand, within A4249_RS11245at 2263.835 kb on + strand, within A4249_RS11245

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,261,365 + +0.0
2,261,365 + -0.3
2,261,366 - -0.3
2,261,896 + A4249_RS11230 0.88 +0.1
2,261,896 + A4249_RS11230 0.88 +0.1
2,261,896 + A4249_RS11230 0.88 +0.0
2,261,896 + A4249_RS11230 0.88 -0.4
2,261,896 + A4249_RS11230 0.88 -0.1
2,261,896 + A4249_RS11230 0.88 +0.3
2,261,896 + A4249_RS11230 0.88 +0.3
2,261,897 - A4249_RS11230 0.88 +0.3
2,261,897 - A4249_RS11230 0.88 -2.2
2,261,897 - A4249_RS11230 0.88 -0.4
2,261,897 - A4249_RS11230 0.88 +0.0
2,261,897 - A4249_RS11230 0.88 -0.2
2,262,220 - A4249_RS11240 0.13 -1.7
2,262,432 + A4249_RS11240 0.38 -1.1
2,262,432 + A4249_RS11240 0.38 +0.0
2,262,433 - A4249_RS11240 0.38 +0.1
2,262,490 + A4249_RS11240 0.45 -1.2
2,262,490 + A4249_RS11240 0.45 -1.0
2,262,490 + A4249_RS11240 0.45 -0.1
2,262,490 + A4249_RS11240 0.45 -0.5
2,262,491 - A4249_RS11240 0.45 -0.6
2,262,491 - A4249_RS11240 0.45 +0.1
2,262,492 + A4249_RS11240 0.45 -0.9
2,262,492 + A4249_RS11240 0.45 -0.9
2,262,492 + A4249_RS11240 0.45 -0.3
2,262,492 + A4249_RS11240 0.45 -0.6
2,262,492 + A4249_RS11240 0.45 +0.6
2,262,493 - A4249_RS11240 0.45 -0.1
2,262,493 - A4249_RS11240 0.45 +0.1
2,262,493 - A4249_RS11240 0.45 -0.2
2,262,493 - A4249_RS11240 0.45 -1.0
2,262,493 - A4249_RS11240 0.45 -0.3
2,262,493 - A4249_RS11240 0.45 -0.4
2,262,493 - A4249_RS11240 0.45 -0.3
2,262,493 - A4249_RS11240 0.45 -0.2
2,262,577 - A4249_RS11240 0.55 +1.8
2,262,577 - A4249_RS11240 0.55 -2.0
2,262,577 - A4249_RS11240 0.55 +0.6
2,262,663 + A4249_RS11240 0.65 +0.2
2,262,721 - A4249_RS11240 0.72 -2.4
2,262,721 - A4249_RS11240 0.72 -1.0
2,262,721 - A4249_RS11240 0.72 -0.7
2,262,756 + A4249_RS11240 0.76 +0.5
2,262,756 + A4249_RS11240 0.76 +0.4
2,262,802 - A4249_RS11240 0.81 +0.1
2,262,834 + A4249_RS11240 0.85 +0.0
2,262,841 + A4249_RS11240 0.86 -0.2
2,262,985 + -0.0
2,262,985 + -0.9
2,262,985 + -0.1
2,262,985 + +0.1
2,262,985 + -0.6
2,262,985 + +0.6
2,262,985 + -0.9
2,262,985 + -1.2
2,262,985 + -1.1
2,262,986 - +0.3
2,262,986 - +0.3
2,262,986 - +0.1
2,262,986 - -0.6
2,262,986 - +0.3
2,262,986 - +0.8
2,262,986 - +0.1
2,262,986 - +0.1
2,262,986 - -0.4
2,263,021 + -0.4
2,263,021 + +0.5
2,263,021 + +0.3
2,263,022 - +0.3
2,263,022 - +0.1
2,263,022 - -0.6
2,263,022 - +0.2
2,263,022 - -0.1
2,263,022 - -0.4
2,263,022 - -1.0
2,263,022 - -0.0
2,263,022 - -0.4
2,263,663 + A4249_RS11245 0.32 -0.6
2,263,664 - A4249_RS11245 0.33 -0.4
2,263,664 - A4249_RS11245 0.33 -0.1
2,263,826 - A4249_RS11245 0.41 -0.2
2,263,835 + A4249_RS11245 0.41 -0.0

Or see this region's nucleotide sequence