Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS11005 and A4249_RS11010 are separated by 755 nucleotides A4249_RS11010 and A4249_RS11015 are separated by 120 nucleotides
A4249_RS11005: A4249_RS11005 - DUF488 domain-containing protein, at 2,209,616 to 2,210,245
_RS11005
A4249_RS11010: A4249_RS11010 - ATP-dependent chaperone ClpB, at 2,211,001 to 2,213,589
_RS11010
A4249_RS11015: A4249_RS11015 - TonB-dependent receptor, at 2,213,710 to 2,216,001
_RS11015
Position (kb)
2211
2212
2213
2214 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2210.252 kb on + strand at 2210.253 kb on - strand at 2210.412 kb on + strand at 2210.412 kb on + strand at 2210.413 kb on - strand at 2210.413 kb on - strand at 2210.413 kb on - strand at 2210.426 kb on + strand at 2210.426 kb on + strand at 2210.426 kb on + strand at 2210.426 kb on + strand at 2210.426 kb on + strand at 2210.426 kb on + strand at 2210.426 kb on + strand at 2210.426 kb on + strand at 2210.427 kb on - strand at 2210.427 kb on - strand at 2210.427 kb on - strand at 2210.427 kb on - strand at 2210.427 kb on - strand at 2210.427 kb on - strand at 2210.427 kb on - strand at 2210.427 kb on - strand at 2210.427 kb on - strand at 2210.427 kb on - strand at 2210.427 kb on - strand at 2210.427 kb on - strand at 2210.427 kb on - strand at 2210.427 kb on - strand at 2210.427 kb on - strand at 2210.427 kb on - strand at 2210.427 kb on - strand at 2210.434 kb on + strand at 2210.434 kb on + strand at 2210.434 kb on + strand at 2210.435 kb on - strand at 2210.446 kb on + strand at 2210.451 kb on + strand at 2210.451 kb on + strand at 2210.451 kb on + strand at 2210.451 kb on + strand at 2210.451 kb on + strand at 2210.451 kb on + strand at 2210.452 kb on - strand at 2210.452 kb on - strand at 2210.452 kb on - strand at 2210.452 kb on - strand at 2210.452 kb on - strand at 2210.452 kb on - strand at 2210.452 kb on - strand at 2210.463 kb on + strand at 2210.464 kb on - strand at 2210.481 kb on - strand at 2210.492 kb on + strand at 2210.554 kb on + strand at 2210.554 kb on + strand at 2210.555 kb on - strand at 2210.555 kb on - strand at 2210.555 kb on - strand at 2210.561 kb on + strand at 2210.561 kb on + strand at 2210.561 kb on + strand at 2210.561 kb on + strand at 2210.561 kb on + strand at 2210.562 kb on - strand at 2210.562 kb on - strand at 2210.562 kb on - strand at 2210.562 kb on - strand at 2210.562 kb on - strand at 2210.562 kb on - strand at 2210.562 kb on - strand at 2210.562 kb on - strand at 2210.562 kb on - strand at 2210.594 kb on + strand at 2210.594 kb on + strand at 2210.595 kb on - strand at 2210.595 kb on - strand at 2210.679 kb on + strand at 2210.679 kb on + strand at 2210.693 kb on - strand at 2210.724 kb on + strand at 2210.725 kb on - strand at 2210.795 kb on + strand at 2210.796 kb on - strand at 2210.796 kb on - strand at 2210.796 kb on - strand at 2210.796 kb on - strand at 2210.796 kb on - strand at 2210.796 kb on - strand at 2210.836 kb on - strand at 2210.844 kb on + strand at 2210.844 kb on + strand at 2210.845 kb on - strand at 2210.845 kb on - strand at 2210.845 kb on - strand at 2210.845 kb on - strand at 2210.845 kb on - strand at 2210.845 kb on - strand at 2210.899 kb on - strand at 2210.908 kb on - strand at 2210.908 kb on - strand at 2210.914 kb on + strand at 2210.914 kb on + strand at 2210.915 kb on - strand at 2210.922 kb on - strand at 2210.922 kb on - strand at 2210.973 kb on + strand at 2210.980 kb on + strand at 2211.002 kb on + strand at 2211.003 kb on - strand at 2211.153 kb on - strand at 2211.164 kb on + strand at 2211.416 kb on + strand, within A4249_RS11010 at 2211.416 kb on + strand, within A4249_RS11010 at 2211.416 kb on + strand, within A4249_RS11010 at 2211.416 kb on + strand, within A4249_RS11010 at 2211.417 kb on - strand, within A4249_RS11010 at 2211.417 kb on - strand, within A4249_RS11010 at 2211.417 kb on - strand, within A4249_RS11010 at 2211.417 kb on - strand, within A4249_RS11010 at 2211.575 kb on + strand, within A4249_RS11010 at 2211.621 kb on - strand, within A4249_RS11010 at 2211.621 kb on - strand, within A4249_RS11010 at 2211.621 kb on - strand, within A4249_RS11010 at 2211.621 kb on - strand, within A4249_RS11010 at 2211.629 kb on + strand, within A4249_RS11010 at 2211.629 kb on + strand, within A4249_RS11010 at 2211.629 kb on + strand, within A4249_RS11010 at 2211.630 kb on - strand, within A4249_RS11010 at 2211.630 kb on - strand, within A4249_RS11010 at 2211.675 kb on + strand, within A4249_RS11010 at 2211.675 kb on + strand, within A4249_RS11010 at 2211.675 kb on + strand, within A4249_RS11010 at 2211.675 kb on + strand, within A4249_RS11010 at 2211.676 kb on - strand, within A4249_RS11010 at 2211.676 kb on - strand, within A4249_RS11010 at 2211.676 kb on - strand, within A4249_RS11010 at 2211.677 kb on + strand, within A4249_RS11010 at 2211.677 kb on + strand, within A4249_RS11010 at 2211.677 kb on + strand, within A4249_RS11010 at 2211.677 kb on + strand, within A4249_RS11010 at 2211.677 kb on + strand, within A4249_RS11010 at 2211.677 kb on + strand, within A4249_RS11010 at 2211.677 kb on + strand, within A4249_RS11010 at 2211.677 kb on + strand, within A4249_RS11010 at 2211.677 kb on + strand, within A4249_RS11010 at 2211.678 kb on - strand, within A4249_RS11010 at 2211.678 kb on - strand, within A4249_RS11010 at 2211.678 kb on - strand, within A4249_RS11010 at 2211.678 kb on - strand, within A4249_RS11010 at 2211.678 kb on - strand, within A4249_RS11010 at 2211.687 kb on + strand, within A4249_RS11010 at 2211.687 kb on + strand, within A4249_RS11010 at 2211.687 kb on + strand, within A4249_RS11010 at 2211.687 kb on + strand, within A4249_RS11010 at 2211.687 kb on + strand, within A4249_RS11010 at 2211.688 kb on - strand, within A4249_RS11010 at 2211.688 kb on - strand, within A4249_RS11010 at 2211.688 kb on - strand, within A4249_RS11010 at 2212.083 kb on - strand, within A4249_RS11010 at 2212.451 kb on + strand, within A4249_RS11010 at 2212.451 kb on + strand, within A4249_RS11010 at 2212.451 kb on + strand, within A4249_RS11010 at 2212.451 kb on + strand, within A4249_RS11010 at 2212.451 kb on + strand, within A4249_RS11010 at 2212.451 kb on + strand, within A4249_RS11010 at 2212.452 kb on - strand, within A4249_RS11010 at 2212.520 kb on + strand, within A4249_RS11010 at 2212.520 kb on + strand, within A4249_RS11010 at 2212.520 kb on + strand, within A4249_RS11010 at 2212.520 kb on + strand, within A4249_RS11010 at 2212.520 kb on + strand, within A4249_RS11010 at 2212.520 kb on + strand, within A4249_RS11010 at 2212.520 kb on + strand, within A4249_RS11010 at 2212.521 kb on - strand, within A4249_RS11010 at 2212.521 kb on - strand, within A4249_RS11010 at 2212.521 kb on - strand, within A4249_RS11010 at 2212.635 kb on - strand, within A4249_RS11010 at 2212.791 kb on + strand, within A4249_RS11010 at 2212.792 kb on - strand, within A4249_RS11010 at 2212.838 kb on + strand, within A4249_RS11010 at 2212.838 kb on + strand, within A4249_RS11010 at 2212.838 kb on + strand, within A4249_RS11010 at 2212.838 kb on + strand, within A4249_RS11010 at 2213.211 kb on + strand, within A4249_RS11010 at 2213.211 kb on + strand, within A4249_RS11010 at 2213.212 kb on - strand, within A4249_RS11010 at 2213.345 kb on + strand at 2213.345 kb on + strand at 2213.345 kb on + strand at 2213.346 kb on - strand at 2213.346 kb on - strand at 2213.573 kb on + strand at 2213.573 kb on + strand at 2213.574 kb on - strand at 2213.589 kb on + strand at 2213.590 kb on - strand at 2213.590 kb on - strand at 2213.590 kb on - strand at 2213.590 kb on - strand at 2213.792 kb on + strand at 2213.792 kb on + strand at 2213.792 kb on + strand at 2213.792 kb on + strand at 2213.792 kb on + strand at 2213.792 kb on + strand at 2213.793 kb on - strand at 2213.793 kb on - strand at 2213.793 kb on - strand at 2213.793 kb on - strand at 2213.793 kb on - strand at 2213.793 kb on - strand at 2213.793 kb on - strand at 2213.849 kb on + strand at 2213.849 kb on + strand at 2213.849 kb on + strand at 2213.849 kb on + strand at 2213.849 kb on + strand at 2213.849 kb on + strand at 2213.849 kb on + strand at 2213.850 kb on - strand at 2213.850 kb on - strand at 2213.850 kb on - strand at 2213.850 kb on - strand at 2213.850 kb on - strand at 2213.850 kb on - strand at 2213.930 kb on + strand at 2214.140 kb on + strand, within A4249_RS11015 at 2214.287 kb on + strand, within A4249_RS11015 at 2214.287 kb on + strand, within A4249_RS11015 at 2214.287 kb on + strand, within A4249_RS11015 at 2214.287 kb on + strand, within A4249_RS11015 at 2214.288 kb on - strand, within A4249_RS11015 at 2214.288 kb on - strand, within A4249_RS11015 at 2214.302 kb on + strand, within A4249_RS11015 at 2214.302 kb on + strand, within A4249_RS11015 at 2214.302 kb on + strand, within A4249_RS11015 at 2214.302 kb on + strand, within A4249_RS11015 at 2214.302 kb on + strand, within A4249_RS11015 at 2214.302 kb on + strand, within A4249_RS11015 at 2214.302 kb on + strand, within A4249_RS11015 at 2214.303 kb on - strand, within A4249_RS11015 at 2214.303 kb on - strand, within A4249_RS11015 at 2214.303 kb on - strand, within A4249_RS11015 at 2214.303 kb on - strand, within A4249_RS11015 at 2214.303 kb on - strand, within A4249_RS11015 at 2214.404 kb on + strand, within A4249_RS11015 at 2214.458 kb on + strand, within A4249_RS11015 at 2214.458 kb on + strand, within A4249_RS11015 at 2214.459 kb on - strand, within A4249_RS11015 at 2214.459 kb on - strand, within A4249_RS11015 at 2214.494 kb on + strand, within A4249_RS11015 at 2214.495 kb on - strand, within A4249_RS11015 at 2214.528 kb on - strand, within A4249_RS11015 at 2214.528 kb on - strand, within A4249_RS11015
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,210,252 + +0.0 2,210,253 - +0.7 2,210,412 + -0.1 2,210,412 + -1.3 2,210,413 - +0.3 2,210,413 - +0.7 2,210,413 - -0.8 2,210,426 + +0.6 2,210,426 + -0.6 2,210,426 + -0.3 2,210,426 + +0.1 2,210,426 + -1.9 2,210,426 + +0.6 2,210,426 + +0.3 2,210,426 + -0.6 2,210,427 - +0.4 2,210,427 - -1.0 2,210,427 - -0.4 2,210,427 - -1.2 2,210,427 - -0.2 2,210,427 - +1.0 2,210,427 - +0.4 2,210,427 - -1.2 2,210,427 - -0.3 2,210,427 - +1.0 2,210,427 - -0.8 2,210,427 - -0.6 2,210,427 - -0.3 2,210,427 - +0.3 2,210,427 - -0.7 2,210,427 - -1.1 2,210,427 - +0.1 2,210,434 + -0.9 2,210,434 + +0.2 2,210,434 + -0.7 2,210,435 - +0.2 2,210,446 + -0.5 2,210,451 + -0.1 2,210,451 + +1.3 2,210,451 + -1.3 2,210,451 + -0.2 2,210,451 + -0.6 2,210,451 + +0.0 2,210,452 - +0.6 2,210,452 - -0.6 2,210,452 - -0.5 2,210,452 - -0.2 2,210,452 - -0.4 2,210,452 - +0.3 2,210,452 - -0.8 2,210,463 + -0.4 2,210,464 - +0.6 2,210,481 - +0.1 2,210,492 + -0.8 2,210,554 + -0.3 2,210,554 + -0.3 2,210,555 - +1.5 2,210,555 - -1.3 2,210,555 - +0.8 2,210,561 + -0.1 2,210,561 + -0.7 2,210,561 + -0.5 2,210,561 + +0.6 2,210,561 + +0.1 2,210,562 - -0.2 2,210,562 - +0.8 2,210,562 - -0.2 2,210,562 - -0.6 2,210,562 - -0.1 2,210,562 - +0.8 2,210,562 - -0.5 2,210,562 - -0.1 2,210,562 - -0.3 2,210,594 + +0.7 2,210,594 + +0.4 2,210,595 - -1.4 2,210,595 - -1.1 2,210,679 + -0.2 2,210,679 + -0.2 2,210,693 - -0.2 2,210,724 + -1.5 2,210,725 - -1.8 2,210,795 + -0.1 2,210,796 - -0.4 2,210,796 - -0.4 2,210,796 - +0.2 2,210,796 - +0.6 2,210,796 - -0.1 2,210,796 - -0.9 2,210,836 - -0.6 2,210,844 + -0.8 2,210,844 + -0.2 2,210,845 - +0.5 2,210,845 - -0.1 2,210,845 - -0.1 2,210,845 - +0.0 2,210,845 - -0.1 2,210,845 - -0.3 2,210,899 - +0.1 2,210,908 - -0.4 2,210,908 - -0.3 2,210,914 + -0.6 2,210,914 + +0.2 2,210,915 - -0.2 2,210,922 - +0.8 2,210,922 - -0.9 2,210,973 + -0.5 2,210,980 + +0.4 2,211,002 + +0.3 2,211,003 - +0.6 2,211,153 - -0.1 2,211,164 + -0.2 2,211,416 + A4249_RS11010 0.16 -1.8 2,211,416 + A4249_RS11010 0.16 -0.3 2,211,416 + A4249_RS11010 0.16 +0.3 2,211,416 + A4249_RS11010 0.16 -1.4 2,211,417 - A4249_RS11010 0.16 +0.4 2,211,417 - A4249_RS11010 0.16 +0.5 2,211,417 - A4249_RS11010 0.16 +0.5 2,211,417 - A4249_RS11010 0.16 +0.0 2,211,575 + A4249_RS11010 0.22 -0.3 2,211,621 - A4249_RS11010 0.24 +0.1 2,211,621 - A4249_RS11010 0.24 -0.0 2,211,621 - A4249_RS11010 0.24 +1.5 2,211,621 - A4249_RS11010 0.24 -0.8 2,211,629 + A4249_RS11010 0.24 -0.3 2,211,629 + A4249_RS11010 0.24 -0.1 2,211,629 + A4249_RS11010 0.24 -0.3 2,211,630 - A4249_RS11010 0.24 +0.7 2,211,630 - A4249_RS11010 0.24 +0.5 2,211,675 + A4249_RS11010 0.26 -0.4 2,211,675 + A4249_RS11010 0.26 -0.2 2,211,675 + A4249_RS11010 0.26 -0.8 2,211,675 + A4249_RS11010 0.26 +0.6 2,211,676 - A4249_RS11010 0.26 +0.1 2,211,676 - A4249_RS11010 0.26 -0.6 2,211,676 - A4249_RS11010 0.26 +0.9 2,211,677 + A4249_RS11010 0.26 -0.3 2,211,677 + A4249_RS11010 0.26 -0.8 2,211,677 + A4249_RS11010 0.26 -0.1 2,211,677 + A4249_RS11010 0.26 +0.1 2,211,677 + A4249_RS11010 0.26 -0.2 2,211,677 + A4249_RS11010 0.26 +0.1 2,211,677 + A4249_RS11010 0.26 -0.1 2,211,677 + A4249_RS11010 0.26 -0.2 2,211,677 + A4249_RS11010 0.26 -0.5 2,211,678 - A4249_RS11010 0.26 -0.5 2,211,678 - A4249_RS11010 0.26 -0.6 2,211,678 - A4249_RS11010 0.26 -1.6 2,211,678 - A4249_RS11010 0.26 +0.2 2,211,678 - A4249_RS11010 0.26 -0.4 2,211,687 + A4249_RS11010 0.26 -0.0 2,211,687 + A4249_RS11010 0.26 +0.0 2,211,687 + A4249_RS11010 0.26 +1.2 2,211,687 + A4249_RS11010 0.26 -0.1 2,211,687 + A4249_RS11010 0.26 -0.1 2,211,688 - A4249_RS11010 0.27 -0.0 2,211,688 - A4249_RS11010 0.27 -0.3 2,211,688 - A4249_RS11010 0.27 -0.1 2,212,083 - A4249_RS11010 0.42 +0.3 2,212,451 + A4249_RS11010 0.56 +0.2 2,212,451 + A4249_RS11010 0.56 -1.7 2,212,451 + A4249_RS11010 0.56 -0.5 2,212,451 + A4249_RS11010 0.56 +0.5 2,212,451 + A4249_RS11010 0.56 +1.8 2,212,451 + A4249_RS11010 0.56 -0.0 2,212,452 - A4249_RS11010 0.56 +0.2 2,212,520 + A4249_RS11010 0.59 +0.3 2,212,520 + A4249_RS11010 0.59 -0.2 2,212,520 + A4249_RS11010 0.59 -0.5 2,212,520 + A4249_RS11010 0.59 -0.7 2,212,520 + A4249_RS11010 0.59 +0.1 2,212,520 + A4249_RS11010 0.59 -0.0 2,212,520 + A4249_RS11010 0.59 -0.8 2,212,521 - A4249_RS11010 0.59 +0.1 2,212,521 - A4249_RS11010 0.59 -0.6 2,212,521 - A4249_RS11010 0.59 +0.4 2,212,635 - A4249_RS11010 0.63 -0.4 2,212,791 + A4249_RS11010 0.69 -0.0 2,212,792 - A4249_RS11010 0.69 +0.6 2,212,838 + A4249_RS11010 0.71 +0.6 2,212,838 + A4249_RS11010 0.71 -0.1 2,212,838 + A4249_RS11010 0.71 +0.2 2,212,838 + A4249_RS11010 0.71 -0.2 2,213,211 + A4249_RS11010 0.85 +0.6 2,213,211 + A4249_RS11010 0.85 -1.3 2,213,212 - A4249_RS11010 0.85 -1.4 2,213,345 + +0.3 2,213,345 + +0.9 2,213,345 + +1.5 2,213,346 - -1.0 2,213,346 - +0.5 2,213,573 + +0.1 2,213,573 + -1.3 2,213,574 - -0.4 2,213,589 + -0.7 2,213,590 - -0.5 2,213,590 - -0.2 2,213,590 - +1.2 2,213,590 - -0.5 2,213,792 + -0.4 2,213,792 + +0.1 2,213,792 + +1.4 2,213,792 + +0.1 2,213,792 + -0.3 2,213,792 + +1.6 2,213,793 - +0.6 2,213,793 - -0.6 2,213,793 - +0.0 2,213,793 - +0.4 2,213,793 - -0.1 2,213,793 - +0.7 2,213,793 - -0.3 2,213,849 + +0.5 2,213,849 + -0.6 2,213,849 + -0.0 2,213,849 + -0.3 2,213,849 + -0.4 2,213,849 + -0.6 2,213,849 + -0.2 2,213,850 - +0.1 2,213,850 - -0.4 2,213,850 - -0.3 2,213,850 - -0.2 2,213,850 - -0.1 2,213,850 - +0.7 2,213,930 + -1.0 2,214,140 + A4249_RS11015 0.19 +0.2 2,214,287 + A4249_RS11015 0.25 +0.0 2,214,287 + A4249_RS11015 0.25 -0.0 2,214,287 + A4249_RS11015 0.25 +0.0 2,214,287 + A4249_RS11015 0.25 -0.7 2,214,288 - A4249_RS11015 0.25 +0.0 2,214,288 - A4249_RS11015 0.25 +0.1 2,214,302 + A4249_RS11015 0.26 -0.2 2,214,302 + A4249_RS11015 0.26 -0.2 2,214,302 + A4249_RS11015 0.26 -0.1 2,214,302 + A4249_RS11015 0.26 +0.6 2,214,302 + A4249_RS11015 0.26 +0.4 2,214,302 + A4249_RS11015 0.26 -1.3 2,214,302 + A4249_RS11015 0.26 +0.7 2,214,303 - A4249_RS11015 0.26 -0.8 2,214,303 - A4249_RS11015 0.26 +0.1 2,214,303 - A4249_RS11015 0.26 +0.3 2,214,303 - A4249_RS11015 0.26 -0.8 2,214,303 - A4249_RS11015 0.26 -1.5 2,214,404 + A4249_RS11015 0.30 -0.0 2,214,458 + A4249_RS11015 0.33 +0.6 2,214,458 + A4249_RS11015 0.33 -1.1 2,214,459 - A4249_RS11015 0.33 -0.6 2,214,459 - A4249_RS11015 0.33 -0.3 2,214,494 + A4249_RS11015 0.34 -0.2 2,214,495 - A4249_RS11015 0.34 -0.8 2,214,528 - A4249_RS11015 0.36 +0.2 2,214,528 - A4249_RS11015 0.36 -0.3
Or see this region's nucleotide sequence