Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS10910

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS10900 and A4249_RS10905 are separated by 198 nucleotidesA4249_RS10905 and A4249_RS10910 are separated by 100 nucleotidesA4249_RS10910 and A4249_RS10915 overlap by 4 nucleotidesA4249_RS10915 and A4249_RS10920 overlap by 4 nucleotides A4249_RS10900: A4249_RS10900 - 30S ribosomal protein S1, at 2,191,893 to 2,193,596 _RS10900 A4249_RS10905: A4249_RS10905 - (d)CMP kinase, at 2,193,795 to 2,194,439 _RS10905 A4249_RS10910: A4249_RS10910 - hypothetical protein, at 2,194,540 to 2,194,821 _RS10910 A4249_RS10915: A4249_RS10915 - hypothetical protein, at 2,194,818 to 2,195,087 _RS10915 A4249_RS10920: A4249_RS10920 - 3-phosphoshikimate 1-carboxyvinyltransferase, at 2,195,084 to 2,196,403 _RS10920 Position (kb) 2194 2195Strain fitness (log2 ratio) -2 -1 0 1at 2193.696 kb on - strandat 2194.506 kb on - strandat 2194.625 kb on + strand, within A4249_RS10910at 2194.625 kb on + strand, within A4249_RS10910at 2194.625 kb on + strand, within A4249_RS10910at 2194.625 kb on + strand, within A4249_RS10910at 2194.625 kb on + strand, within A4249_RS10910at 2194.625 kb on + strand, within A4249_RS10910at 2194.625 kb on + strand, within A4249_RS10910at 2194.625 kb on + strand, within A4249_RS10910at 2194.625 kb on + strand, within A4249_RS10910at 2194.625 kb on + strand, within A4249_RS10910at 2194.625 kb on + strand, within A4249_RS10910at 2194.625 kb on + strand, within A4249_RS10910at 2194.625 kb on + strand, within A4249_RS10910at 2194.625 kb on + strand, within A4249_RS10910at 2194.625 kb on + strand, within A4249_RS10910at 2194.626 kb on - strand, within A4249_RS10910at 2194.626 kb on - strand, within A4249_RS10910at 2194.626 kb on - strand, within A4249_RS10910at 2194.626 kb on - strand, within A4249_RS10910at 2194.626 kb on - strand, within A4249_RS10910at 2194.626 kb on - strand, within A4249_RS10910at 2194.915 kb on + strand, within A4249_RS10915at 2194.915 kb on + strand, within A4249_RS10915at 2194.915 kb on + strand, within A4249_RS10915at 2194.915 kb on + strand, within A4249_RS10915at 2194.915 kb on + strand, within A4249_RS10915at 2194.916 kb on - strand, within A4249_RS10915at 2194.916 kb on - strand, within A4249_RS10915

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,193,696 - -0.1
2,194,506 - -0.7
2,194,625 + A4249_RS10910 0.30 +0.2
2,194,625 + A4249_RS10910 0.30 -1.0
2,194,625 + A4249_RS10910 0.30 -0.5
2,194,625 + A4249_RS10910 0.30 -0.3
2,194,625 + A4249_RS10910 0.30 +0.5
2,194,625 + A4249_RS10910 0.30 -2.2
2,194,625 + A4249_RS10910 0.30 -0.6
2,194,625 + A4249_RS10910 0.30 +0.9
2,194,625 + A4249_RS10910 0.30 +0.5
2,194,625 + A4249_RS10910 0.30 +0.1
2,194,625 + A4249_RS10910 0.30 -0.0
2,194,625 + A4249_RS10910 0.30 -0.4
2,194,625 + A4249_RS10910 0.30 +0.5
2,194,625 + A4249_RS10910 0.30 +1.1
2,194,625 + A4249_RS10910 0.30 -0.3
2,194,626 - A4249_RS10910 0.30 +0.4
2,194,626 - A4249_RS10910 0.30 -0.1
2,194,626 - A4249_RS10910 0.30 -1.1
2,194,626 - A4249_RS10910 0.30 -0.8
2,194,626 - A4249_RS10910 0.30 -0.2
2,194,626 - A4249_RS10910 0.30 -0.6
2,194,915 + A4249_RS10915 0.36 +0.3
2,194,915 + A4249_RS10915 0.36 -0.2
2,194,915 + A4249_RS10915 0.36 -0.0
2,194,915 + A4249_RS10915 0.36 -0.1
2,194,915 + A4249_RS10915 0.36 -0.1
2,194,916 - A4249_RS10915 0.36 -0.2
2,194,916 - A4249_RS10915 0.36 -0.2

Or see this region's nucleotide sequence