Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS10900 and A4249_RS10905 are separated by 198 nucleotides A4249_RS10905 and A4249_RS10910 are separated by 100 nucleotides A4249_RS10910 and A4249_RS10915 overlap by 4 nucleotides A4249_RS10915 and A4249_RS10920 overlap by 4 nucleotides
A4249_RS10900: A4249_RS10900 - 30S ribosomal protein S1, at 2,191,893 to 2,193,596
_RS10900
A4249_RS10905: A4249_RS10905 - (d)CMP kinase, at 2,193,795 to 2,194,439
_RS10905
A4249_RS10910: A4249_RS10910 - hypothetical protein, at 2,194,540 to 2,194,821
_RS10910
A4249_RS10915: A4249_RS10915 - hypothetical protein, at 2,194,818 to 2,195,087
_RS10915
A4249_RS10920: A4249_RS10920 - 3-phosphoshikimate 1-carboxyvinyltransferase, at 2,195,084 to 2,196,403
_RS10920
Position (kb)
2194
2195 Strain fitness (log2 ratio)
-2
-1
0
1 at 2193.696 kb on - strand at 2194.506 kb on - strand at 2194.625 kb on + strand, within A4249_RS10910 at 2194.625 kb on + strand, within A4249_RS10910 at 2194.625 kb on + strand, within A4249_RS10910 at 2194.625 kb on + strand, within A4249_RS10910 at 2194.625 kb on + strand, within A4249_RS10910 at 2194.625 kb on + strand, within A4249_RS10910 at 2194.625 kb on + strand, within A4249_RS10910 at 2194.625 kb on + strand, within A4249_RS10910 at 2194.625 kb on + strand, within A4249_RS10910 at 2194.625 kb on + strand, within A4249_RS10910 at 2194.625 kb on + strand, within A4249_RS10910 at 2194.625 kb on + strand, within A4249_RS10910 at 2194.625 kb on + strand, within A4249_RS10910 at 2194.625 kb on + strand, within A4249_RS10910 at 2194.625 kb on + strand, within A4249_RS10910 at 2194.626 kb on - strand, within A4249_RS10910 at 2194.626 kb on - strand, within A4249_RS10910 at 2194.626 kb on - strand, within A4249_RS10910 at 2194.626 kb on - strand, within A4249_RS10910 at 2194.626 kb on - strand, within A4249_RS10910 at 2194.626 kb on - strand, within A4249_RS10910 at 2194.915 kb on + strand, within A4249_RS10915 at 2194.915 kb on + strand, within A4249_RS10915 at 2194.915 kb on + strand, within A4249_RS10915 at 2194.915 kb on + strand, within A4249_RS10915 at 2194.915 kb on + strand, within A4249_RS10915 at 2194.916 kb on - strand, within A4249_RS10915 at 2194.916 kb on - strand, within A4249_RS10915
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,193,696 - -0.1 2,194,506 - -0.7 2,194,625 + A4249_RS10910 0.30 +0.2 2,194,625 + A4249_RS10910 0.30 -1.0 2,194,625 + A4249_RS10910 0.30 -0.5 2,194,625 + A4249_RS10910 0.30 -0.3 2,194,625 + A4249_RS10910 0.30 +0.5 2,194,625 + A4249_RS10910 0.30 -2.2 2,194,625 + A4249_RS10910 0.30 -0.6 2,194,625 + A4249_RS10910 0.30 +0.9 2,194,625 + A4249_RS10910 0.30 +0.5 2,194,625 + A4249_RS10910 0.30 +0.1 2,194,625 + A4249_RS10910 0.30 -0.0 2,194,625 + A4249_RS10910 0.30 -0.4 2,194,625 + A4249_RS10910 0.30 +0.5 2,194,625 + A4249_RS10910 0.30 +1.1 2,194,625 + A4249_RS10910 0.30 -0.3 2,194,626 - A4249_RS10910 0.30 +0.4 2,194,626 - A4249_RS10910 0.30 -0.1 2,194,626 - A4249_RS10910 0.30 -1.1 2,194,626 - A4249_RS10910 0.30 -0.8 2,194,626 - A4249_RS10910 0.30 -0.2 2,194,626 - A4249_RS10910 0.30 -0.6 2,194,915 + A4249_RS10915 0.36 +0.3 2,194,915 + A4249_RS10915 0.36 -0.2 2,194,915 + A4249_RS10915 0.36 -0.0 2,194,915 + A4249_RS10915 0.36 -0.1 2,194,915 + A4249_RS10915 0.36 -0.1 2,194,916 - A4249_RS10915 0.36 -0.2 2,194,916 - A4249_RS10915 0.36 -0.2
Or see this region's nucleotide sequence