Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS10890 and A4249_RS10895 are separated by 23 nucleotides A4249_RS10895 and A4249_RS10900 are separated by 328 nucleotides A4249_RS10900 and A4249_RS10905 are separated by 198 nucleotides A4249_RS10905 and A4249_RS10910 are separated by 100 nucleotides
A4249_RS10890: A4249_RS10890 - large-conductance mechanosensitive channel protein MscL, at 2,190,828 to 2,191,250
_RS10890
A4249_RS10895: A4249_RS10895 - integration host factor subunit beta, at 2,191,274 to 2,191,564
_RS10895
A4249_RS10900: A4249_RS10900 - 30S ribosomal protein S1, at 2,191,893 to 2,193,596
_RS10900
A4249_RS10905: A4249_RS10905 - (d)CMP kinase, at 2,193,795 to 2,194,439
_RS10905
A4249_RS10910: A4249_RS10910 - hypothetical protein, at 2,194,540 to 2,194,821
_RS10910
Position (kb)
2191
2192
2193
2194 Strain fitness (log2 ratio)
-1
0
1 at 2191.018 kb on + strand, within A4249_RS10890 at 2191.019 kb on - strand, within A4249_RS10890 at 2191.270 kb on + strand at 2191.270 kb on + strand at 2191.270 kb on + strand at 2191.270 kb on + strand at 2191.271 kb on - strand at 2191.819 kb on + strand at 2193.696 kb on - strand at 2194.506 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,191,018 + A4249_RS10890 0.45 -0.2 2,191,019 - A4249_RS10890 0.45 -0.3 2,191,270 + -0.1 2,191,270 + -0.7 2,191,270 + +0.3 2,191,270 + +0.6 2,191,271 - +0.1 2,191,819 + -0.2 2,193,696 - -0.1 2,194,506 - -0.7
Or see this region's nucleotide sequence