Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS10870 and A4249_RS10875 are separated by 187 nucleotides A4249_RS10875 and A4249_RS10880 are separated by 70 nucleotides
A4249_RS10870: A4249_RS10870 - TraB/GumN family protein, at 2,184,221 to 2,185,132
_RS10870
A4249_RS10875: A4249_RS10875 - TonB-dependent receptor, at 2,185,320 to 2,187,389
_RS10875
A4249_RS10880: A4249_RS10880 - oligopeptide:H+ symporter, at 2,187,460 to 2,189,394
_RS10880
Position (kb)
2185
2186
2187
2188 Strain fitness (log2 ratio)
-2
-1
0
1 at 2184.392 kb on + strand, within A4249_RS10870 at 2184.392 kb on + strand, within A4249_RS10870 at 2184.392 kb on + strand, within A4249_RS10870 at 2184.392 kb on + strand, within A4249_RS10870 at 2184.392 kb on + strand, within A4249_RS10870 at 2184.393 kb on - strand, within A4249_RS10870 at 2184.393 kb on - strand, within A4249_RS10870 at 2184.393 kb on - strand, within A4249_RS10870 at 2184.393 kb on - strand, within A4249_RS10870 at 2184.394 kb on + strand, within A4249_RS10870 at 2184.394 kb on + strand, within A4249_RS10870 at 2184.394 kb on + strand, within A4249_RS10870 at 2184.394 kb on + strand, within A4249_RS10870 at 2184.395 kb on - strand, within A4249_RS10870 at 2184.395 kb on - strand, within A4249_RS10870 at 2184.395 kb on - strand, within A4249_RS10870 at 2184.395 kb on - strand, within A4249_RS10870 at 2184.395 kb on - strand, within A4249_RS10870 at 2184.395 kb on - strand, within A4249_RS10870 at 2184.395 kb on - strand, within A4249_RS10870 at 2184.432 kb on + strand, within A4249_RS10870 at 2184.432 kb on + strand, within A4249_RS10870 at 2184.433 kb on - strand, within A4249_RS10870 at 2184.573 kb on + strand, within A4249_RS10870 at 2184.708 kb on + strand, within A4249_RS10870 at 2184.709 kb on - strand, within A4249_RS10870 at 2184.813 kb on + strand, within A4249_RS10870 at 2184.813 kb on + strand, within A4249_RS10870 at 2184.813 kb on + strand, within A4249_RS10870 at 2184.813 kb on + strand, within A4249_RS10870 at 2184.813 kb on + strand, within A4249_RS10870 at 2184.813 kb on + strand, within A4249_RS10870 at 2184.813 kb on + strand, within A4249_RS10870 at 2184.813 kb on + strand, within A4249_RS10870 at 2184.814 kb on - strand, within A4249_RS10870 at 2184.814 kb on - strand, within A4249_RS10870 at 2184.814 kb on - strand, within A4249_RS10870 at 2184.814 kb on - strand, within A4249_RS10870 at 2184.814 kb on - strand, within A4249_RS10870 at 2184.814 kb on - strand, within A4249_RS10870 at 2184.814 kb on - strand, within A4249_RS10870 at 2184.814 kb on - strand, within A4249_RS10870 at 2185.143 kb on - strand at 2185.143 kb on - strand at 2185.152 kb on - strand at 2185.152 kb on - strand at 2185.175 kb on + strand at 2185.209 kb on + strand at 2185.210 kb on - strand at 2185.210 kb on - strand at 2185.223 kb on + strand at 2185.223 kb on + strand at 2185.223 kb on + strand at 2185.224 kb on - strand at 2185.260 kb on + strand at 2185.261 kb on - strand at 2185.261 kb on - strand at 2185.511 kb on + strand at 2185.512 kb on - strand at 2185.732 kb on - strand, within A4249_RS10875 at 2185.827 kb on + strand, within A4249_RS10875 at 2185.827 kb on + strand, within A4249_RS10875 at 2185.827 kb on + strand, within A4249_RS10875 at 2185.827 kb on + strand, within A4249_RS10875 at 2185.827 kb on + strand, within A4249_RS10875 at 2185.828 kb on - strand, within A4249_RS10875 at 2185.828 kb on - strand, within A4249_RS10875 at 2185.828 kb on - strand, within A4249_RS10875 at 2185.828 kb on - strand, within A4249_RS10875 at 2185.828 kb on - strand, within A4249_RS10875 at 2185.828 kb on - strand, within A4249_RS10875 at 2185.828 kb on - strand, within A4249_RS10875 at 2185.828 kb on - strand, within A4249_RS10875 at 2185.828 kb on - strand, within A4249_RS10875 at 2185.828 kb on - strand, within A4249_RS10875 at 2185.828 kb on - strand, within A4249_RS10875 at 2185.828 kb on - strand, within A4249_RS10875 at 2185.828 kb on - strand, within A4249_RS10875 at 2185.828 kb on - strand, within A4249_RS10875 at 2185.839 kb on + strand, within A4249_RS10875 at 2185.840 kb on - strand, within A4249_RS10875 at 2185.840 kb on - strand, within A4249_RS10875 at 2185.840 kb on - strand, within A4249_RS10875 at 2185.840 kb on - strand, within A4249_RS10875 at 2185.974 kb on + strand, within A4249_RS10875 at 2186.019 kb on + strand, within A4249_RS10875 at 2186.019 kb on + strand, within A4249_RS10875 at 2186.019 kb on + strand, within A4249_RS10875 at 2186.019 kb on + strand, within A4249_RS10875 at 2186.019 kb on + strand, within A4249_RS10875 at 2186.019 kb on + strand, within A4249_RS10875 at 2186.020 kb on - strand, within A4249_RS10875 at 2186.020 kb on - strand, within A4249_RS10875 at 2186.020 kb on - strand, within A4249_RS10875 at 2186.020 kb on - strand, within A4249_RS10875 at 2186.020 kb on - strand, within A4249_RS10875 at 2186.065 kb on - strand, within A4249_RS10875 at 2186.079 kb on + strand, within A4249_RS10875 at 2186.079 kb on + strand, within A4249_RS10875 at 2186.079 kb on + strand, within A4249_RS10875 at 2186.079 kb on + strand, within A4249_RS10875 at 2186.080 kb on - strand, within A4249_RS10875 at 2186.080 kb on - strand, within A4249_RS10875 at 2186.080 kb on - strand, within A4249_RS10875 at 2186.080 kb on - strand, within A4249_RS10875 at 2186.130 kb on + strand, within A4249_RS10875 at 2186.131 kb on - strand, within A4249_RS10875 at 2186.131 kb on - strand, within A4249_RS10875 at 2186.264 kb on - strand, within A4249_RS10875 at 2186.391 kb on + strand, within A4249_RS10875 at 2186.391 kb on + strand, within A4249_RS10875 at 2186.391 kb on + strand, within A4249_RS10875 at 2186.391 kb on + strand, within A4249_RS10875 at 2186.392 kb on - strand, within A4249_RS10875 at 2186.392 kb on - strand, within A4249_RS10875 at 2186.396 kb on + strand, within A4249_RS10875 at 2186.396 kb on + strand, within A4249_RS10875 at 2186.396 kb on + strand, within A4249_RS10875 at 2186.396 kb on + strand, within A4249_RS10875 at 2186.396 kb on + strand, within A4249_RS10875 at 2186.396 kb on + strand, within A4249_RS10875 at 2186.396 kb on + strand, within A4249_RS10875 at 2186.396 kb on + strand, within A4249_RS10875 at 2186.396 kb on + strand, within A4249_RS10875 at 2186.396 kb on + strand, within A4249_RS10875 at 2186.396 kb on + strand, within A4249_RS10875 at 2186.396 kb on + strand, within A4249_RS10875 at 2186.396 kb on + strand, within A4249_RS10875 at 2186.396 kb on + strand, within A4249_RS10875 at 2186.396 kb on + strand, within A4249_RS10875 at 2186.396 kb on + strand, within A4249_RS10875 at 2186.396 kb on + strand, within A4249_RS10875 at 2186.396 kb on + strand, within A4249_RS10875 at 2186.396 kb on + strand, within A4249_RS10875 at 2186.397 kb on - strand, within A4249_RS10875 at 2186.397 kb on - strand, within A4249_RS10875 at 2186.397 kb on - strand, within A4249_RS10875 at 2186.397 kb on - strand, within A4249_RS10875 at 2186.397 kb on - strand, within A4249_RS10875 at 2186.397 kb on - strand, within A4249_RS10875 at 2186.397 kb on - strand, within A4249_RS10875 at 2186.397 kb on - strand, within A4249_RS10875 at 2186.794 kb on - strand, within A4249_RS10875 at 2187.159 kb on + strand, within A4249_RS10875 at 2187.159 kb on + strand, within A4249_RS10875 at 2187.159 kb on + strand, within A4249_RS10875 at 2187.160 kb on - strand, within A4249_RS10875 at 2187.198 kb on + strand at 2187.199 kb on - strand at 2187.199 kb on - strand at 2187.199 kb on - strand at 2187.199 kb on - strand at 2187.219 kb on + strand at 2187.219 kb on + strand at 2187.219 kb on + strand at 2187.219 kb on + strand at 2187.219 kb on + strand at 2187.219 kb on + strand at 2187.219 kb on + strand at 2187.219 kb on + strand at 2187.220 kb on - strand at 2187.220 kb on - strand at 2187.220 kb on - strand at 2187.220 kb on - strand at 2187.220 kb on - strand at 2187.294 kb on + strand at 2187.294 kb on + strand at 2187.295 kb on - strand at 2187.737 kb on + strand, within A4249_RS10880 at 2187.737 kb on + strand, within A4249_RS10880 at 2187.737 kb on + strand, within A4249_RS10880 at 2187.737 kb on + strand, within A4249_RS10880 at 2187.737 kb on + strand, within A4249_RS10880 at 2187.738 kb on - strand, within A4249_RS10880 at 2187.738 kb on - strand, within A4249_RS10880 at 2187.738 kb on - strand, within A4249_RS10880 at 2187.738 kb on - strand, within A4249_RS10880 at 2187.738 kb on - strand, within A4249_RS10880 at 2187.866 kb on + strand, within A4249_RS10880 at 2187.867 kb on - strand, within A4249_RS10880 at 2187.867 kb on - strand, within A4249_RS10880 at 2187.867 kb on - strand, within A4249_RS10880 at 2187.867 kb on - strand, within A4249_RS10880 at 2187.867 kb on - strand, within A4249_RS10880 at 2187.867 kb on - strand, within A4249_RS10880 at 2188.213 kb on - strand, within A4249_RS10880 at 2188.349 kb on + strand, within A4249_RS10880 at 2188.350 kb on - strand, within A4249_RS10880
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,184,392 + A4249_RS10870 0.19 -1.4 2,184,392 + A4249_RS10870 0.19 -0.5 2,184,392 + A4249_RS10870 0.19 -0.3 2,184,392 + A4249_RS10870 0.19 -0.1 2,184,392 + A4249_RS10870 0.19 +0.6 2,184,393 - A4249_RS10870 0.19 +0.6 2,184,393 - A4249_RS10870 0.19 -0.2 2,184,393 - A4249_RS10870 0.19 -0.2 2,184,393 - A4249_RS10870 0.19 -0.2 2,184,394 + A4249_RS10870 0.19 -0.7 2,184,394 + A4249_RS10870 0.19 -2.0 2,184,394 + A4249_RS10870 0.19 -1.4 2,184,394 + A4249_RS10870 0.19 +0.1 2,184,395 - A4249_RS10870 0.19 +0.2 2,184,395 - A4249_RS10870 0.19 -0.0 2,184,395 - A4249_RS10870 0.19 +0.8 2,184,395 - A4249_RS10870 0.19 +0.7 2,184,395 - A4249_RS10870 0.19 +0.4 2,184,395 - A4249_RS10870 0.19 -0.1 2,184,395 - A4249_RS10870 0.19 -0.3 2,184,432 + A4249_RS10870 0.23 -0.1 2,184,432 + A4249_RS10870 0.23 -0.5 2,184,433 - A4249_RS10870 0.23 +0.2 2,184,573 + A4249_RS10870 0.39 -0.1 2,184,708 + A4249_RS10870 0.53 -0.5 2,184,709 - A4249_RS10870 0.54 +0.8 2,184,813 + A4249_RS10870 0.65 +0.9 2,184,813 + A4249_RS10870 0.65 +0.2 2,184,813 + A4249_RS10870 0.65 +0.6 2,184,813 + A4249_RS10870 0.65 -0.1 2,184,813 + A4249_RS10870 0.65 +0.4 2,184,813 + A4249_RS10870 0.65 -0.6 2,184,813 + A4249_RS10870 0.65 -2.0 2,184,813 + A4249_RS10870 0.65 +0.5 2,184,814 - A4249_RS10870 0.65 -0.0 2,184,814 - A4249_RS10870 0.65 -0.6 2,184,814 - A4249_RS10870 0.65 -0.6 2,184,814 - A4249_RS10870 0.65 -0.2 2,184,814 - A4249_RS10870 0.65 -0.6 2,184,814 - A4249_RS10870 0.65 +0.3 2,184,814 - A4249_RS10870 0.65 +0.5 2,184,814 - A4249_RS10870 0.65 -1.4 2,185,143 - +1.3 2,185,143 - -0.3 2,185,152 - +0.4 2,185,152 - +0.2 2,185,175 + -0.2 2,185,209 + -0.7 2,185,210 - +0.8 2,185,210 - +0.3 2,185,223 + +0.2 2,185,223 + +0.7 2,185,223 + -0.2 2,185,224 - -0.1 2,185,260 + -0.9 2,185,261 - -0.1 2,185,261 - +0.2 2,185,511 + +0.4 2,185,512 - -0.2 2,185,732 - A4249_RS10875 0.20 +0.2 2,185,827 + A4249_RS10875 0.24 +0.4 2,185,827 + A4249_RS10875 0.24 +0.2 2,185,827 + A4249_RS10875 0.24 +1.0 2,185,827 + A4249_RS10875 0.24 -0.4 2,185,827 + A4249_RS10875 0.24 +0.0 2,185,828 - A4249_RS10875 0.25 -0.4 2,185,828 - A4249_RS10875 0.25 +0.3 2,185,828 - A4249_RS10875 0.25 -0.7 2,185,828 - A4249_RS10875 0.25 -0.7 2,185,828 - A4249_RS10875 0.25 -0.1 2,185,828 - A4249_RS10875 0.25 +0.2 2,185,828 - A4249_RS10875 0.25 +0.2 2,185,828 - A4249_RS10875 0.25 -0.3 2,185,828 - A4249_RS10875 0.25 +0.5 2,185,828 - A4249_RS10875 0.25 +0.1 2,185,828 - A4249_RS10875 0.25 -0.4 2,185,828 - A4249_RS10875 0.25 +0.2 2,185,828 - A4249_RS10875 0.25 -0.3 2,185,828 - A4249_RS10875 0.25 -0.0 2,185,839 + A4249_RS10875 0.25 -0.9 2,185,840 - A4249_RS10875 0.25 +0.3 2,185,840 - A4249_RS10875 0.25 +0.3 2,185,840 - A4249_RS10875 0.25 -0.4 2,185,840 - A4249_RS10875 0.25 +0.4 2,185,974 + A4249_RS10875 0.32 +0.9 2,186,019 + A4249_RS10875 0.34 +0.2 2,186,019 + A4249_RS10875 0.34 +0.2 2,186,019 + A4249_RS10875 0.34 -0.2 2,186,019 + A4249_RS10875 0.34 +0.6 2,186,019 + A4249_RS10875 0.34 +0.2 2,186,019 + A4249_RS10875 0.34 +0.5 2,186,020 - A4249_RS10875 0.34 -0.4 2,186,020 - A4249_RS10875 0.34 -0.2 2,186,020 - A4249_RS10875 0.34 -0.6 2,186,020 - A4249_RS10875 0.34 +0.3 2,186,020 - A4249_RS10875 0.34 -0.6 2,186,065 - A4249_RS10875 0.36 -0.6 2,186,079 + A4249_RS10875 0.37 -0.1 2,186,079 + A4249_RS10875 0.37 -0.1 2,186,079 + A4249_RS10875 0.37 -0.5 2,186,079 + A4249_RS10875 0.37 -1.5 2,186,080 - A4249_RS10875 0.37 -0.5 2,186,080 - A4249_RS10875 0.37 +0.4 2,186,080 - A4249_RS10875 0.37 -0.8 2,186,080 - A4249_RS10875 0.37 -0.3 2,186,130 + A4249_RS10875 0.39 -0.0 2,186,131 - A4249_RS10875 0.39 +0.4 2,186,131 - A4249_RS10875 0.39 -0.4 2,186,264 - A4249_RS10875 0.46 -0.1 2,186,391 + A4249_RS10875 0.52 -0.2 2,186,391 + A4249_RS10875 0.52 -0.6 2,186,391 + A4249_RS10875 0.52 -0.1 2,186,391 + A4249_RS10875 0.52 -0.9 2,186,392 - A4249_RS10875 0.52 +0.7 2,186,392 - A4249_RS10875 0.52 -0.5 2,186,396 + A4249_RS10875 0.52 -0.2 2,186,396 + A4249_RS10875 0.52 -0.8 2,186,396 + A4249_RS10875 0.52 +0.3 2,186,396 + A4249_RS10875 0.52 +1.1 2,186,396 + A4249_RS10875 0.52 -0.4 2,186,396 + A4249_RS10875 0.52 -0.0 2,186,396 + A4249_RS10875 0.52 -0.9 2,186,396 + A4249_RS10875 0.52 +0.3 2,186,396 + A4249_RS10875 0.52 -0.4 2,186,396 + A4249_RS10875 0.52 +0.6 2,186,396 + A4249_RS10875 0.52 -0.1 2,186,396 + A4249_RS10875 0.52 -0.4 2,186,396 + A4249_RS10875 0.52 +0.8 2,186,396 + A4249_RS10875 0.52 +0.1 2,186,396 + A4249_RS10875 0.52 +0.2 2,186,396 + A4249_RS10875 0.52 +0.6 2,186,396 + A4249_RS10875 0.52 +0.4 2,186,396 + A4249_RS10875 0.52 +0.8 2,186,396 + A4249_RS10875 0.52 +0.7 2,186,397 - A4249_RS10875 0.52 +0.2 2,186,397 - A4249_RS10875 0.52 +0.0 2,186,397 - A4249_RS10875 0.52 -0.0 2,186,397 - A4249_RS10875 0.52 -0.0 2,186,397 - A4249_RS10875 0.52 -1.1 2,186,397 - A4249_RS10875 0.52 +0.3 2,186,397 - A4249_RS10875 0.52 -0.3 2,186,397 - A4249_RS10875 0.52 +0.2 2,186,794 - A4249_RS10875 0.71 -0.5 2,187,159 + A4249_RS10875 0.89 -0.0 2,187,159 + A4249_RS10875 0.89 -0.5 2,187,159 + A4249_RS10875 0.89 -0.9 2,187,160 - A4249_RS10875 0.89 +0.2 2,187,198 + +1.0 2,187,199 - -0.6 2,187,199 - +0.2 2,187,199 - +0.0 2,187,199 - +0.2 2,187,219 + +0.1 2,187,219 + +0.1 2,187,219 + -0.5 2,187,219 + -0.3 2,187,219 + -0.3 2,187,219 + -0.1 2,187,219 + -1.6 2,187,219 + +0.0 2,187,220 - -0.1 2,187,220 - +0.1 2,187,220 - -0.2 2,187,220 - -0.2 2,187,220 - -0.3 2,187,294 + +1.6 2,187,294 + +0.3 2,187,295 - -1.6 2,187,737 + A4249_RS10880 0.14 -0.8 2,187,737 + A4249_RS10880 0.14 +1.0 2,187,737 + A4249_RS10880 0.14 -0.7 2,187,737 + A4249_RS10880 0.14 +0.3 2,187,737 + A4249_RS10880 0.14 +1.1 2,187,738 - A4249_RS10880 0.14 -0.9 2,187,738 - A4249_RS10880 0.14 +0.4 2,187,738 - A4249_RS10880 0.14 -0.7 2,187,738 - A4249_RS10880 0.14 -0.4 2,187,738 - A4249_RS10880 0.14 +0.3 2,187,866 + A4249_RS10880 0.21 +0.0 2,187,867 - A4249_RS10880 0.21 +0.7 2,187,867 - A4249_RS10880 0.21 -0.9 2,187,867 - A4249_RS10880 0.21 +0.0 2,187,867 - A4249_RS10880 0.21 +0.2 2,187,867 - A4249_RS10880 0.21 -1.6 2,187,867 - A4249_RS10880 0.21 +0.7 2,188,213 - A4249_RS10880 0.39 +0.5 2,188,349 + A4249_RS10880 0.46 -0.5 2,188,350 - A4249_RS10880 0.46 -0.8
Or see this region's nucleotide sequence