Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS10800

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS10790 and A4249_RS16965 are separated by 65 nucleotidesA4249_RS16965 and A4249_RS10800 are separated by 284 nucleotidesA4249_RS10800 and A4249_RS10805 are separated by 4 nucleotides A4249_RS10790: A4249_RS10790 - RNA polymerase sigma factor, at 2,165,926 to 2,166,498 _RS10790 A4249_RS16965: A4249_RS16965 - hypothetical protein, at 2,166,564 to 2,166,968 _RS16965 A4249_RS10800: A4249_RS10800 - bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase, at 2,167,253 to 2,170,179 _RS10800 A4249_RS10805: A4249_RS10805 - ATP-binding protein, at 2,170,184 to 2,171,611 _RS10805 Position (kb) 2167 2168 2169 2170 2171Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2166.565 kb on + strandat 2166.565 kb on + strandat 2166.565 kb on + strandat 2166.565 kb on + strandat 2166.565 kb on + strandat 2166.566 kb on - strandat 2166.566 kb on - strandat 2166.600 kb on + strandat 2166.601 kb on - strandat 2167.837 kb on + strand, within A4249_RS10800at 2167.931 kb on + strand, within A4249_RS10800at 2168.993 kb on + strand, within A4249_RS10800at 2168.993 kb on + strand, within A4249_RS10800at 2168.993 kb on + strand, within A4249_RS10800at 2168.993 kb on + strand, within A4249_RS10800at 2168.993 kb on + strand, within A4249_RS10800at 2168.994 kb on - strand, within A4249_RS10800at 2168.994 kb on - strand, within A4249_RS10800at 2169.128 kb on + strand, within A4249_RS10800at 2169.255 kb on - strand, within A4249_RS10800at 2169.255 kb on - strand, within A4249_RS10800at 2169.294 kb on + strand, within A4249_RS10800at 2169.383 kb on + strand, within A4249_RS10800at 2169.383 kb on + strand, within A4249_RS10800at 2169.383 kb on + strand, within A4249_RS10800at 2169.383 kb on + strand, within A4249_RS10800at 2169.383 kb on + strand, within A4249_RS10800at 2169.383 kb on + strand, within A4249_RS10800at 2169.383 kb on + strand, within A4249_RS10800at 2169.383 kb on + strand, within A4249_RS10800at 2169.384 kb on - strand, within A4249_RS10800at 2169.384 kb on - strand, within A4249_RS10800at 2169.384 kb on - strand, within A4249_RS10800at 2169.384 kb on - strand, within A4249_RS10800at 2169.384 kb on - strand, within A4249_RS10800at 2169.386 kb on + strand, within A4249_RS10800at 2169.386 kb on + strand, within A4249_RS10800at 2169.386 kb on + strand, within A4249_RS10800at 2169.386 kb on + strand, within A4249_RS10800at 2169.387 kb on - strand, within A4249_RS10800at 2169.387 kb on - strand, within A4249_RS10800at 2169.387 kb on - strand, within A4249_RS10800at 2169.387 kb on - strand, within A4249_RS10800at 2169.387 kb on - strand, within A4249_RS10800at 2169.387 kb on - strand, within A4249_RS10800at 2169.467 kb on + strand, within A4249_RS10800at 2169.467 kb on + strand, within A4249_RS10800at 2169.467 kb on + strand, within A4249_RS10800at 2169.467 kb on + strand, within A4249_RS10800at 2169.467 kb on + strand, within A4249_RS10800at 2169.467 kb on + strand, within A4249_RS10800at 2169.612 kb on - strand, within A4249_RS10800at 2169.666 kb on + strand, within A4249_RS10800at 2169.667 kb on - strand, within A4249_RS10800at 2170.146 kb on - strandat 2170.328 kb on + strand, within A4249_RS10805at 2170.329 kb on - strand, within A4249_RS10805at 2170.329 kb on - strand, within A4249_RS10805at 2170.435 kb on - strand, within A4249_RS10805at 2170.435 kb on - strand, within A4249_RS10805at 2170.497 kb on + strand, within A4249_RS10805at 2170.497 kb on + strand, within A4249_RS10805at 2170.497 kb on + strand, within A4249_RS10805at 2170.497 kb on + strand, within A4249_RS10805at 2170.497 kb on + strand, within A4249_RS10805at 2170.497 kb on + strand, within A4249_RS10805at 2170.498 kb on - strand, within A4249_RS10805at 2170.498 kb on - strand, within A4249_RS10805at 2170.498 kb on - strand, within A4249_RS10805at 2170.498 kb on - strand, within A4249_RS10805at 2170.498 kb on - strand, within A4249_RS10805at 2170.593 kb on + strand, within A4249_RS10805at 2170.623 kb on + strand, within A4249_RS10805at 2170.623 kb on + strand, within A4249_RS10805at 2170.624 kb on - strand, within A4249_RS10805at 2171.058 kb on + strand, within A4249_RS10805at 2171.058 kb on + strand, within A4249_RS10805at 2171.058 kb on + strand, within A4249_RS10805at 2171.058 kb on + strand, within A4249_RS10805at 2171.058 kb on + strand, within A4249_RS10805at 2171.058 kb on + strand, within A4249_RS10805at 2171.059 kb on - strand, within A4249_RS10805at 2171.059 kb on - strand, within A4249_RS10805at 2171.059 kb on - strand, within A4249_RS10805at 2171.059 kb on - strand, within A4249_RS10805at 2171.133 kb on + strand, within A4249_RS10805at 2171.133 kb on + strand, within A4249_RS10805at 2171.133 kb on + strand, within A4249_RS10805at 2171.133 kb on + strand, within A4249_RS10805at 2171.134 kb on - strand, within A4249_RS10805at 2171.134 kb on - strand, within A4249_RS10805at 2171.134 kb on - strand, within A4249_RS10805at 2171.134 kb on - strand, within A4249_RS10805at 2171.134 kb on - strand, within A4249_RS10805at 2171.134 kb on - strand, within A4249_RS10805at 2171.134 kb on - strand, within A4249_RS10805

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,166,565 + -0.4
2,166,565 + -0.3
2,166,565 + +0.2
2,166,565 + +1.6
2,166,565 + -0.1
2,166,566 - -0.1
2,166,566 - +0.3
2,166,600 + -0.7
2,166,601 - -0.4
2,167,837 + A4249_RS10800 0.20 +0.6
2,167,931 + A4249_RS10800 0.23 -0.2
2,168,993 + A4249_RS10800 0.59 -2.6
2,168,993 + A4249_RS10800 0.59 +0.4
2,168,993 + A4249_RS10800 0.59 -0.6
2,168,993 + A4249_RS10800 0.59 -2.1
2,168,993 + A4249_RS10800 0.59 +0.3
2,168,994 - A4249_RS10800 0.59 -0.3
2,168,994 - A4249_RS10800 0.59 -1.4
2,169,128 + A4249_RS10800 0.64 +0.7
2,169,255 - A4249_RS10800 0.68 +0.4
2,169,255 - A4249_RS10800 0.68 -0.8
2,169,294 + A4249_RS10800 0.70 -0.1
2,169,383 + A4249_RS10800 0.73 -0.2
2,169,383 + A4249_RS10800 0.73 +0.2
2,169,383 + A4249_RS10800 0.73 +0.2
2,169,383 + A4249_RS10800 0.73 +0.2
2,169,383 + A4249_RS10800 0.73 -0.3
2,169,383 + A4249_RS10800 0.73 +0.3
2,169,383 + A4249_RS10800 0.73 +1.0
2,169,383 + A4249_RS10800 0.73 -0.0
2,169,384 - A4249_RS10800 0.73 -0.1
2,169,384 - A4249_RS10800 0.73 -0.3
2,169,384 - A4249_RS10800 0.73 -0.6
2,169,384 - A4249_RS10800 0.73 +0.0
2,169,384 - A4249_RS10800 0.73 +0.1
2,169,386 + A4249_RS10800 0.73 -0.0
2,169,386 + A4249_RS10800 0.73 +0.3
2,169,386 + A4249_RS10800 0.73 -2.2
2,169,386 + A4249_RS10800 0.73 -1.6
2,169,387 - A4249_RS10800 0.73 +0.3
2,169,387 - A4249_RS10800 0.73 -0.1
2,169,387 - A4249_RS10800 0.73 -0.1
2,169,387 - A4249_RS10800 0.73 +0.0
2,169,387 - A4249_RS10800 0.73 +2.7
2,169,387 - A4249_RS10800 0.73 +0.2
2,169,467 + A4249_RS10800 0.76 -0.4
2,169,467 + A4249_RS10800 0.76 -3.3
2,169,467 + A4249_RS10800 0.76 +0.4
2,169,467 + A4249_RS10800 0.76 +2.1
2,169,467 + A4249_RS10800 0.76 -0.3
2,169,467 + A4249_RS10800 0.76 -1.2
2,169,612 - A4249_RS10800 0.81 +0.2
2,169,666 + A4249_RS10800 0.82 +0.6
2,169,667 - A4249_RS10800 0.82 -0.3
2,170,146 - +0.4
2,170,328 + A4249_RS10805 0.10 +0.2
2,170,329 - A4249_RS10805 0.10 -0.5
2,170,329 - A4249_RS10805 0.10 -0.1
2,170,435 - A4249_RS10805 0.18 -0.1
2,170,435 - A4249_RS10805 0.18 -0.4
2,170,497 + A4249_RS10805 0.22 -0.2
2,170,497 + A4249_RS10805 0.22 -0.4
2,170,497 + A4249_RS10805 0.22 -0.7
2,170,497 + A4249_RS10805 0.22 -0.8
2,170,497 + A4249_RS10805 0.22 +0.0
2,170,497 + A4249_RS10805 0.22 +0.1
2,170,498 - A4249_RS10805 0.22 +0.1
2,170,498 - A4249_RS10805 0.22 +1.2
2,170,498 - A4249_RS10805 0.22 -0.5
2,170,498 - A4249_RS10805 0.22 -0.8
2,170,498 - A4249_RS10805 0.22 -0.7
2,170,593 + A4249_RS10805 0.29 +0.6
2,170,623 + A4249_RS10805 0.31 -0.6
2,170,623 + A4249_RS10805 0.31 -0.5
2,170,624 - A4249_RS10805 0.31 +0.0
2,171,058 + A4249_RS10805 0.61 +1.1
2,171,058 + A4249_RS10805 0.61 +0.2
2,171,058 + A4249_RS10805 0.61 -0.1
2,171,058 + A4249_RS10805 0.61 -0.9
2,171,058 + A4249_RS10805 0.61 -0.5
2,171,058 + A4249_RS10805 0.61 -0.3
2,171,059 - A4249_RS10805 0.61 -0.2
2,171,059 - A4249_RS10805 0.61 -1.3
2,171,059 - A4249_RS10805 0.61 -0.8
2,171,059 - A4249_RS10805 0.61 +0.9
2,171,133 + A4249_RS10805 0.66 +0.4
2,171,133 + A4249_RS10805 0.66 -0.4
2,171,133 + A4249_RS10805 0.66 +0.0
2,171,133 + A4249_RS10805 0.66 +0.3
2,171,134 - A4249_RS10805 0.67 -0.6
2,171,134 - A4249_RS10805 0.67 -0.6
2,171,134 - A4249_RS10805 0.67 +0.1
2,171,134 - A4249_RS10805 0.67 -1.4
2,171,134 - A4249_RS10805 0.67 -1.1
2,171,134 - A4249_RS10805 0.67 +0.1
2,171,134 - A4249_RS10805 0.67 -0.1

Or see this region's nucleotide sequence