Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS10655 and A4249_RS10660 are separated by 95 nucleotides A4249_RS10660 and A4249_RS10665 are separated by 61 nucleotides A4249_RS10665 and A4249_RS10670 are separated by 2 nucleotides
A4249_RS10655: A4249_RS10655 - TonB-dependent receptor, at 2,140,685 to 2,143,081
_RS10655
A4249_RS10660: A4249_RS10660 - peptidase, at 2,143,177 to 2,143,962
_RS10660
A4249_RS10665: A4249_RS10665 - transglutaminase family protein, at 2,144,024 to 2,144,866
_RS10665
A4249_RS10670: A4249_RS10670 - alpha-E domain-containing protein, at 2,144,869 to 2,145,807
_RS10670
Position (kb)
2143
2144 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2143.082 kb on - strand at 2143.082 kb on - strand at 2143.301 kb on + strand, within A4249_RS10660 at 2143.301 kb on + strand, within A4249_RS10660 at 2143.302 kb on - strand, within A4249_RS10660 at 2143.302 kb on - strand, within A4249_RS10660 at 2143.302 kb on - strand, within A4249_RS10660 at 2143.302 kb on - strand, within A4249_RS10660 at 2143.302 kb on - strand, within A4249_RS10660 at 2143.514 kb on + strand, within A4249_RS10660 at 2143.521 kb on + strand, within A4249_RS10660 at 2143.556 kb on + strand, within A4249_RS10660 at 2143.557 kb on - strand, within A4249_RS10660 at 2143.557 kb on - strand, within A4249_RS10660 at 2143.565 kb on + strand, within A4249_RS10660 at 2143.565 kb on + strand, within A4249_RS10660 at 2143.565 kb on + strand, within A4249_RS10660 at 2143.566 kb on - strand, within A4249_RS10660 at 2143.566 kb on - strand, within A4249_RS10660 at 2143.566 kb on - strand, within A4249_RS10660 at 2143.566 kb on - strand, within A4249_RS10660 at 2143.566 kb on - strand, within A4249_RS10660 at 2143.566 kb on - strand, within A4249_RS10660 at 2143.566 kb on - strand, within A4249_RS10660 at 2143.653 kb on + strand, within A4249_RS10660 at 2143.653 kb on + strand, within A4249_RS10660 at 2143.653 kb on + strand, within A4249_RS10660 at 2143.654 kb on - strand, within A4249_RS10660 at 2143.730 kb on - strand, within A4249_RS10660 at 2143.853 kb on + strand, within A4249_RS10660 at 2143.853 kb on + strand, within A4249_RS10660 at 2143.854 kb on - strand, within A4249_RS10660 at 2143.854 kb on - strand, within A4249_RS10660 at 2143.854 kb on - strand, within A4249_RS10660 at 2143.854 kb on - strand, within A4249_RS10660 at 2143.854 kb on - strand, within A4249_RS10660 at 2143.871 kb on + strand, within A4249_RS10660 at 2143.872 kb on - strand, within A4249_RS10660 at 2143.948 kb on + strand at 2143.948 kb on + strand at 2143.948 kb on + strand at 2143.949 kb on - strand at 2143.955 kb on + strand at 2143.955 kb on + strand at 2143.955 kb on + strand at 2143.955 kb on + strand at 2143.955 kb on + strand at 2143.955 kb on + strand at 2143.955 kb on + strand at 2143.955 kb on + strand at 2143.955 kb on + strand at 2143.956 kb on - strand at 2143.956 kb on - strand at 2143.956 kb on - strand at 2143.956 kb on - strand at 2143.956 kb on - strand at 2143.956 kb on - strand at 2143.970 kb on + strand at 2143.970 kb on + strand at 2144.004 kb on - strand at 2144.118 kb on + strand, within A4249_RS10665 at 2144.118 kb on + strand, within A4249_RS10665 at 2144.118 kb on + strand, within A4249_RS10665 at 2144.118 kb on + strand, within A4249_RS10665 at 2144.118 kb on + strand, within A4249_RS10665 at 2144.119 kb on - strand, within A4249_RS10665 at 2144.157 kb on - strand, within A4249_RS10665 at 2144.178 kb on + strand, within A4249_RS10665 at 2144.178 kb on + strand, within A4249_RS10665 at 2144.178 kb on + strand, within A4249_RS10665 at 2144.178 kb on + strand, within A4249_RS10665 at 2144.178 kb on + strand, within A4249_RS10665 at 2144.178 kb on + strand, within A4249_RS10665 at 2144.178 kb on + strand, within A4249_RS10665 at 2144.178 kb on + strand, within A4249_RS10665 at 2144.178 kb on + strand, within A4249_RS10665 at 2144.178 kb on + strand, within A4249_RS10665 at 2144.178 kb on + strand, within A4249_RS10665 at 2144.179 kb on - strand, within A4249_RS10665 at 2144.179 kb on - strand, within A4249_RS10665 at 2144.179 kb on - strand, within A4249_RS10665 at 2144.179 kb on - strand, within A4249_RS10665 at 2144.179 kb on - strand, within A4249_RS10665 at 2144.179 kb on - strand, within A4249_RS10665 at 2144.179 kb on - strand, within A4249_RS10665 at 2144.179 kb on - strand, within A4249_RS10665 at 2144.179 kb on - strand, within A4249_RS10665 at 2144.179 kb on - strand, within A4249_RS10665 at 2144.179 kb on - strand, within A4249_RS10665 at 2144.179 kb on - strand, within A4249_RS10665 at 2144.179 kb on - strand, within A4249_RS10665 at 2144.313 kb on + strand, within A4249_RS10665 at 2144.313 kb on + strand, within A4249_RS10665 at 2144.313 kb on + strand, within A4249_RS10665 at 2144.314 kb on - strand, within A4249_RS10665 at 2144.449 kb on + strand, within A4249_RS10665 at 2144.449 kb on + strand, within A4249_RS10665 at 2144.449 kb on + strand, within A4249_RS10665 at 2144.449 kb on + strand, within A4249_RS10665 at 2144.449 kb on + strand, within A4249_RS10665 at 2144.449 kb on + strand, within A4249_RS10665 at 2144.450 kb on - strand, within A4249_RS10665 at 2144.450 kb on - strand, within A4249_RS10665 at 2144.450 kb on - strand, within A4249_RS10665 at 2144.566 kb on - strand, within A4249_RS10665 at 2144.566 kb on - strand, within A4249_RS10665 at 2144.676 kb on + strand, within A4249_RS10665 at 2144.676 kb on + strand, within A4249_RS10665 at 2144.676 kb on + strand, within A4249_RS10665 at 2144.677 kb on - strand, within A4249_RS10665 at 2144.732 kb on + strand, within A4249_RS10665 at 2144.732 kb on + strand, within A4249_RS10665 at 2144.732 kb on + strand, within A4249_RS10665 at 2144.733 kb on - strand, within A4249_RS10665 at 2144.733 kb on - strand, within A4249_RS10665 at 2144.733 kb on - strand, within A4249_RS10665 at 2144.733 kb on - strand, within A4249_RS10665 at 2144.733 kb on - strand, within A4249_RS10665 at 2144.733 kb on - strand, within A4249_RS10665 at 2144.733 kb on - strand, within A4249_RS10665 at 2144.829 kb on + strand at 2144.879 kb on + strand at 2144.879 kb on + strand at 2144.879 kb on + strand at 2144.879 kb on + strand at 2144.879 kb on + strand at 2144.879 kb on + strand at 2144.879 kb on + strand at 2144.879 kb on + strand at 2144.880 kb on - strand at 2144.880 kb on - strand at 2144.880 kb on - strand at 2144.880 kb on - strand at 2144.880 kb on - strand at 2144.920 kb on + strand at 2144.921 kb on - strand at 2144.921 kb on - strand at 2144.936 kb on + strand at 2144.936 kb on + strand at 2144.936 kb on + strand at 2144.936 kb on + strand at 2144.937 kb on - strand at 2144.937 kb on - strand at 2144.937 kb on - strand at 2144.937 kb on - strand at 2144.937 kb on - strand at 2144.937 kb on - strand at 2144.937 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,143,082 - +0.1 2,143,082 - +0.8 2,143,301 + A4249_RS10660 0.16 -0.8 2,143,301 + A4249_RS10660 0.16 -0.6 2,143,302 - A4249_RS10660 0.16 +1.7 2,143,302 - A4249_RS10660 0.16 -0.4 2,143,302 - A4249_RS10660 0.16 -0.1 2,143,302 - A4249_RS10660 0.16 -0.2 2,143,302 - A4249_RS10660 0.16 +0.5 2,143,514 + A4249_RS10660 0.43 -0.1 2,143,521 + A4249_RS10660 0.44 -0.3 2,143,556 + A4249_RS10660 0.48 -0.1 2,143,557 - A4249_RS10660 0.48 -0.6 2,143,557 - A4249_RS10660 0.48 -0.9 2,143,565 + A4249_RS10660 0.49 +0.7 2,143,565 + A4249_RS10660 0.49 -0.7 2,143,565 + A4249_RS10660 0.49 +0.8 2,143,566 - A4249_RS10660 0.49 +0.5 2,143,566 - A4249_RS10660 0.49 -0.6 2,143,566 - A4249_RS10660 0.49 +0.3 2,143,566 - A4249_RS10660 0.49 +0.4 2,143,566 - A4249_RS10660 0.49 -1.3 2,143,566 - A4249_RS10660 0.49 -1.2 2,143,566 - A4249_RS10660 0.49 -0.0 2,143,653 + A4249_RS10660 0.61 +0.1 2,143,653 + A4249_RS10660 0.61 -1.9 2,143,653 + A4249_RS10660 0.61 -1.4 2,143,654 - A4249_RS10660 0.61 +1.4 2,143,730 - A4249_RS10660 0.70 -1.1 2,143,853 + A4249_RS10660 0.86 -0.5 2,143,853 + A4249_RS10660 0.86 -0.7 2,143,854 - A4249_RS10660 0.86 +1.4 2,143,854 - A4249_RS10660 0.86 +0.9 2,143,854 - A4249_RS10660 0.86 -0.3 2,143,854 - A4249_RS10660 0.86 -0.9 2,143,854 - A4249_RS10660 0.86 -0.0 2,143,871 + A4249_RS10660 0.88 -0.6 2,143,872 - A4249_RS10660 0.88 -0.2 2,143,948 + +0.2 2,143,948 + -1.0 2,143,948 + +0.2 2,143,949 - +0.4 2,143,955 + -0.2 2,143,955 + -1.0 2,143,955 + +1.1 2,143,955 + +0.1 2,143,955 + +0.4 2,143,955 + +0.6 2,143,955 + -1.7 2,143,955 + +0.9 2,143,955 + -0.7 2,143,956 - +0.3 2,143,956 - -0.0 2,143,956 - -0.0 2,143,956 - +0.6 2,143,956 - -0.9 2,143,956 - +0.9 2,143,970 + +1.1 2,143,970 + +2.1 2,144,004 - -0.0 2,144,118 + A4249_RS10665 0.11 +0.6 2,144,118 + A4249_RS10665 0.11 -0.0 2,144,118 + A4249_RS10665 0.11 +0.2 2,144,118 + A4249_RS10665 0.11 -0.6 2,144,118 + A4249_RS10665 0.11 -0.3 2,144,119 - A4249_RS10665 0.11 -0.6 2,144,157 - A4249_RS10665 0.16 +0.0 2,144,178 + A4249_RS10665 0.18 +0.6 2,144,178 + A4249_RS10665 0.18 -0.4 2,144,178 + A4249_RS10665 0.18 -1.4 2,144,178 + A4249_RS10665 0.18 +0.7 2,144,178 + A4249_RS10665 0.18 +0.2 2,144,178 + A4249_RS10665 0.18 +0.1 2,144,178 + A4249_RS10665 0.18 -0.5 2,144,178 + A4249_RS10665 0.18 -0.4 2,144,178 + A4249_RS10665 0.18 +0.1 2,144,178 + A4249_RS10665 0.18 +0.0 2,144,178 + A4249_RS10665 0.18 +0.3 2,144,179 - A4249_RS10665 0.18 +0.5 2,144,179 - A4249_RS10665 0.18 -0.6 2,144,179 - A4249_RS10665 0.18 -0.2 2,144,179 - A4249_RS10665 0.18 +0.4 2,144,179 - A4249_RS10665 0.18 -0.4 2,144,179 - A4249_RS10665 0.18 -0.5 2,144,179 - A4249_RS10665 0.18 -0.1 2,144,179 - A4249_RS10665 0.18 +0.5 2,144,179 - A4249_RS10665 0.18 -0.1 2,144,179 - A4249_RS10665 0.18 +0.1 2,144,179 - A4249_RS10665 0.18 -0.9 2,144,179 - A4249_RS10665 0.18 -0.4 2,144,179 - A4249_RS10665 0.18 +0.0 2,144,313 + A4249_RS10665 0.34 -0.2 2,144,313 + A4249_RS10665 0.34 +0.9 2,144,313 + A4249_RS10665 0.34 -0.3 2,144,314 - A4249_RS10665 0.34 -0.0 2,144,449 + A4249_RS10665 0.50 +0.6 2,144,449 + A4249_RS10665 0.50 -0.1 2,144,449 + A4249_RS10665 0.50 +0.2 2,144,449 + A4249_RS10665 0.50 -0.2 2,144,449 + A4249_RS10665 0.50 +0.0 2,144,449 + A4249_RS10665 0.50 +0.4 2,144,450 - A4249_RS10665 0.51 +0.1 2,144,450 - A4249_RS10665 0.51 -0.2 2,144,450 - A4249_RS10665 0.51 +0.3 2,144,566 - A4249_RS10665 0.64 -0.3 2,144,566 - A4249_RS10665 0.64 +0.6 2,144,676 + A4249_RS10665 0.77 +0.3 2,144,676 + A4249_RS10665 0.77 -0.5 2,144,676 + A4249_RS10665 0.77 -0.1 2,144,677 - A4249_RS10665 0.77 -1.1 2,144,732 + A4249_RS10665 0.84 -0.5 2,144,732 + A4249_RS10665 0.84 -0.7 2,144,732 + A4249_RS10665 0.84 -1.4 2,144,733 - A4249_RS10665 0.84 -0.7 2,144,733 - A4249_RS10665 0.84 -0.1 2,144,733 - A4249_RS10665 0.84 -0.2 2,144,733 - A4249_RS10665 0.84 -0.1 2,144,733 - A4249_RS10665 0.84 +0.2 2,144,733 - A4249_RS10665 0.84 -0.6 2,144,733 - A4249_RS10665 0.84 -0.4 2,144,829 + +0.1 2,144,879 + -0.1 2,144,879 + +0.5 2,144,879 + -1.1 2,144,879 + +0.0 2,144,879 + +0.0 2,144,879 + -0.1 2,144,879 + -0.4 2,144,879 + -0.1 2,144,880 - -0.5 2,144,880 - -0.6 2,144,880 - +0.3 2,144,880 - -0.0 2,144,880 - -0.5 2,144,920 + +1.0 2,144,921 - +0.3 2,144,921 - -0.2 2,144,936 + +0.3 2,144,936 + -0.3 2,144,936 + +0.4 2,144,936 + +1.3 2,144,937 - -0.3 2,144,937 - -0.0 2,144,937 - -0.2 2,144,937 - -0.4 2,144,937 - +0.3 2,144,937 - -0.1 2,144,937 - -0.4
Or see this region's nucleotide sequence