Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS10640 and A4249_RS10645 are separated by 11 nucleotides A4249_RS10645 and A4249_RS10650 are separated by 67 nucleotides A4249_RS10650 and A4249_RS10655 are separated by 76 nucleotides
A4249_RS10640: A4249_RS10640 - DUF2271 domain-containing protein, at 2,138,653 to 2,139,165
_RS10640
A4249_RS10645: A4249_RS10645 - PepSY-associated TM helix domain-containing protein, at 2,139,177 to 2,139,854
_RS10645
A4249_RS10650: A4249_RS10650 - Fe2+-dependent dioxygenase, at 2,139,922 to 2,140,608
_RS10650
A4249_RS10655: A4249_RS10655 - TonB-dependent receptor, at 2,140,685 to 2,143,081
_RS10655
Position (kb)
2139
2140
2141 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2138.978 kb on + strand, within A4249_RS10640 at 2138.979 kb on - strand, within A4249_RS10640 at 2138.979 kb on - strand, within A4249_RS10640 at 2139.038 kb on + strand, within A4249_RS10640 at 2139.038 kb on + strand, within A4249_RS10640 at 2139.038 kb on + strand, within A4249_RS10640 at 2139.039 kb on - strand, within A4249_RS10640 at 2139.039 kb on - strand, within A4249_RS10640 at 2139.039 kb on - strand, within A4249_RS10640 at 2139.051 kb on - strand, within A4249_RS10640 at 2139.380 kb on - strand, within A4249_RS10645 at 2139.380 kb on - strand, within A4249_RS10645 at 2139.478 kb on + strand, within A4249_RS10645 at 2139.478 kb on + strand, within A4249_RS10645 at 2139.478 kb on + strand, within A4249_RS10645 at 2139.478 kb on + strand, within A4249_RS10645 at 2139.478 kb on + strand, within A4249_RS10645 at 2139.478 kb on + strand, within A4249_RS10645 at 2139.479 kb on - strand, within A4249_RS10645 at 2139.479 kb on - strand, within A4249_RS10645 at 2139.479 kb on - strand, within A4249_RS10645 at 2139.479 kb on - strand, within A4249_RS10645 at 2139.479 kb on - strand, within A4249_RS10645 at 2139.479 kb on - strand, within A4249_RS10645 at 2139.639 kb on + strand, within A4249_RS10645 at 2139.639 kb on + strand, within A4249_RS10645 at 2139.639 kb on + strand, within A4249_RS10645 at 2139.639 kb on + strand, within A4249_RS10645 at 2139.639 kb on + strand, within A4249_RS10645 at 2139.639 kb on + strand, within A4249_RS10645 at 2139.639 kb on + strand, within A4249_RS10645 at 2139.639 kb on + strand, within A4249_RS10645 at 2139.640 kb on - strand, within A4249_RS10645 at 2139.640 kb on - strand, within A4249_RS10645 at 2139.640 kb on - strand, within A4249_RS10645 at 2139.640 kb on - strand, within A4249_RS10645 at 2139.749 kb on + strand, within A4249_RS10645 at 2139.749 kb on + strand, within A4249_RS10645 at 2139.749 kb on + strand, within A4249_RS10645 at 2139.749 kb on + strand, within A4249_RS10645 at 2139.749 kb on + strand, within A4249_RS10645 at 2139.749 kb on + strand, within A4249_RS10645 at 2139.749 kb on + strand, within A4249_RS10645 at 2139.749 kb on + strand, within A4249_RS10645 at 2139.749 kb on + strand, within A4249_RS10645 at 2139.749 kb on + strand, within A4249_RS10645 at 2139.749 kb on + strand, within A4249_RS10645 at 2139.749 kb on + strand, within A4249_RS10645 at 2139.749 kb on + strand, within A4249_RS10645 at 2139.749 kb on + strand, within A4249_RS10645 at 2139.749 kb on + strand, within A4249_RS10645 at 2139.750 kb on - strand, within A4249_RS10645 at 2139.750 kb on - strand, within A4249_RS10645 at 2139.750 kb on - strand, within A4249_RS10645 at 2139.750 kb on - strand, within A4249_RS10645 at 2139.750 kb on - strand, within A4249_RS10645 at 2139.750 kb on - strand, within A4249_RS10645 at 2139.750 kb on - strand, within A4249_RS10645 at 2139.750 kb on - strand, within A4249_RS10645 at 2139.897 kb on + strand at 2140.666 kb on + strand at 2140.667 kb on - strand at 2140.667 kb on - strand at 2140.686 kb on + strand at 2140.687 kb on - strand at 2140.867 kb on - strand at 2140.926 kb on + strand, within A4249_RS10655 at 2140.930 kb on - strand, within A4249_RS10655 at 2141.608 kb on - strand, within A4249_RS10655
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,138,978 + A4249_RS10640 0.63 -0.3 2,138,979 - A4249_RS10640 0.64 +0.3 2,138,979 - A4249_RS10640 0.64 -0.1 2,139,038 + A4249_RS10640 0.75 +0.1 2,139,038 + A4249_RS10640 0.75 +0.3 2,139,038 + A4249_RS10640 0.75 -0.2 2,139,039 - A4249_RS10640 0.75 -2.3 2,139,039 - A4249_RS10640 0.75 -0.3 2,139,039 - A4249_RS10640 0.75 -1.0 2,139,051 - A4249_RS10640 0.78 -0.9 2,139,380 - A4249_RS10645 0.30 +0.3 2,139,380 - A4249_RS10645 0.30 +1.0 2,139,478 + A4249_RS10645 0.44 +0.3 2,139,478 + A4249_RS10645 0.44 -0.1 2,139,478 + A4249_RS10645 0.44 +0.9 2,139,478 + A4249_RS10645 0.44 +0.1 2,139,478 + A4249_RS10645 0.44 -0.2 2,139,478 + A4249_RS10645 0.44 -0.5 2,139,479 - A4249_RS10645 0.45 -0.6 2,139,479 - A4249_RS10645 0.45 +0.4 2,139,479 - A4249_RS10645 0.45 -0.4 2,139,479 - A4249_RS10645 0.45 +0.3 2,139,479 - A4249_RS10645 0.45 +0.4 2,139,479 - A4249_RS10645 0.45 -0.5 2,139,639 + A4249_RS10645 0.68 -0.1 2,139,639 + A4249_RS10645 0.68 -1.2 2,139,639 + A4249_RS10645 0.68 -1.8 2,139,639 + A4249_RS10645 0.68 +0.9 2,139,639 + A4249_RS10645 0.68 -0.5 2,139,639 + A4249_RS10645 0.68 -0.6 2,139,639 + A4249_RS10645 0.68 +0.2 2,139,639 + A4249_RS10645 0.68 +1.9 2,139,640 - A4249_RS10645 0.68 +0.1 2,139,640 - A4249_RS10645 0.68 +0.2 2,139,640 - A4249_RS10645 0.68 -0.3 2,139,640 - A4249_RS10645 0.68 -0.3 2,139,749 + A4249_RS10645 0.84 -0.3 2,139,749 + A4249_RS10645 0.84 -1.3 2,139,749 + A4249_RS10645 0.84 -0.1 2,139,749 + A4249_RS10645 0.84 -0.3 2,139,749 + A4249_RS10645 0.84 +0.1 2,139,749 + A4249_RS10645 0.84 -0.1 2,139,749 + A4249_RS10645 0.84 -0.8 2,139,749 + A4249_RS10645 0.84 +0.8 2,139,749 + A4249_RS10645 0.84 -0.9 2,139,749 + A4249_RS10645 0.84 -0.7 2,139,749 + A4249_RS10645 0.84 -0.1 2,139,749 + A4249_RS10645 0.84 +0.1 2,139,749 + A4249_RS10645 0.84 -1.0 2,139,749 + A4249_RS10645 0.84 -1.2 2,139,749 + A4249_RS10645 0.84 +0.3 2,139,750 - A4249_RS10645 0.85 -0.4 2,139,750 - A4249_RS10645 0.85 +0.3 2,139,750 - A4249_RS10645 0.85 -0.4 2,139,750 - A4249_RS10645 0.85 -0.4 2,139,750 - A4249_RS10645 0.85 +0.3 2,139,750 - A4249_RS10645 0.85 -0.4 2,139,750 - A4249_RS10645 0.85 -0.3 2,139,750 - A4249_RS10645 0.85 +0.1 2,139,897 + -0.4 2,140,666 + +0.7 2,140,667 - -0.6 2,140,667 - -0.5 2,140,686 + +0.7 2,140,687 - -0.2 2,140,867 - +0.6 2,140,926 + A4249_RS10655 0.10 +0.1 2,140,930 - A4249_RS10655 0.10 +0.6 2,141,608 - A4249_RS10655 0.39 +1.6
Or see this region's nucleotide sequence