Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS10650

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS10640 and A4249_RS10645 are separated by 11 nucleotidesA4249_RS10645 and A4249_RS10650 are separated by 67 nucleotidesA4249_RS10650 and A4249_RS10655 are separated by 76 nucleotides A4249_RS10640: A4249_RS10640 - DUF2271 domain-containing protein, at 2,138,653 to 2,139,165 _RS10640 A4249_RS10645: A4249_RS10645 - PepSY-associated TM helix domain-containing protein, at 2,139,177 to 2,139,854 _RS10645 A4249_RS10650: A4249_RS10650 - Fe2+-dependent dioxygenase, at 2,139,922 to 2,140,608 _RS10650 A4249_RS10655: A4249_RS10655 - TonB-dependent receptor, at 2,140,685 to 2,143,081 _RS10655 Position (kb) 2139 2140 2141Strain fitness (log2 ratio) -2 -1 0 1 2at 2138.978 kb on + strand, within A4249_RS10640at 2138.979 kb on - strand, within A4249_RS10640at 2138.979 kb on - strand, within A4249_RS10640at 2139.038 kb on + strand, within A4249_RS10640at 2139.038 kb on + strand, within A4249_RS10640at 2139.038 kb on + strand, within A4249_RS10640at 2139.039 kb on - strand, within A4249_RS10640at 2139.039 kb on - strand, within A4249_RS10640at 2139.039 kb on - strand, within A4249_RS10640at 2139.051 kb on - strand, within A4249_RS10640at 2139.380 kb on - strand, within A4249_RS10645at 2139.380 kb on - strand, within A4249_RS10645at 2139.478 kb on + strand, within A4249_RS10645at 2139.478 kb on + strand, within A4249_RS10645at 2139.478 kb on + strand, within A4249_RS10645at 2139.478 kb on + strand, within A4249_RS10645at 2139.478 kb on + strand, within A4249_RS10645at 2139.478 kb on + strand, within A4249_RS10645at 2139.479 kb on - strand, within A4249_RS10645at 2139.479 kb on - strand, within A4249_RS10645at 2139.479 kb on - strand, within A4249_RS10645at 2139.479 kb on - strand, within A4249_RS10645at 2139.479 kb on - strand, within A4249_RS10645at 2139.479 kb on - strand, within A4249_RS10645at 2139.639 kb on + strand, within A4249_RS10645at 2139.639 kb on + strand, within A4249_RS10645at 2139.639 kb on + strand, within A4249_RS10645at 2139.639 kb on + strand, within A4249_RS10645at 2139.639 kb on + strand, within A4249_RS10645at 2139.639 kb on + strand, within A4249_RS10645at 2139.639 kb on + strand, within A4249_RS10645at 2139.639 kb on + strand, within A4249_RS10645at 2139.640 kb on - strand, within A4249_RS10645at 2139.640 kb on - strand, within A4249_RS10645at 2139.640 kb on - strand, within A4249_RS10645at 2139.640 kb on - strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.750 kb on - strand, within A4249_RS10645at 2139.750 kb on - strand, within A4249_RS10645at 2139.750 kb on - strand, within A4249_RS10645at 2139.750 kb on - strand, within A4249_RS10645at 2139.750 kb on - strand, within A4249_RS10645at 2139.750 kb on - strand, within A4249_RS10645at 2139.750 kb on - strand, within A4249_RS10645at 2139.750 kb on - strand, within A4249_RS10645at 2139.897 kb on + strandat 2140.666 kb on + strandat 2140.667 kb on - strandat 2140.667 kb on - strandat 2140.686 kb on + strandat 2140.687 kb on - strandat 2140.867 kb on - strandat 2140.926 kb on + strand, within A4249_RS10655at 2140.930 kb on - strand, within A4249_RS10655at 2141.608 kb on - strand, within A4249_RS10655

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,138,978 + A4249_RS10640 0.63 -0.3
2,138,979 - A4249_RS10640 0.64 +0.3
2,138,979 - A4249_RS10640 0.64 -0.1
2,139,038 + A4249_RS10640 0.75 +0.1
2,139,038 + A4249_RS10640 0.75 +0.3
2,139,038 + A4249_RS10640 0.75 -0.2
2,139,039 - A4249_RS10640 0.75 -2.3
2,139,039 - A4249_RS10640 0.75 -0.3
2,139,039 - A4249_RS10640 0.75 -1.0
2,139,051 - A4249_RS10640 0.78 -0.9
2,139,380 - A4249_RS10645 0.30 +0.3
2,139,380 - A4249_RS10645 0.30 +1.0
2,139,478 + A4249_RS10645 0.44 +0.3
2,139,478 + A4249_RS10645 0.44 -0.1
2,139,478 + A4249_RS10645 0.44 +0.9
2,139,478 + A4249_RS10645 0.44 +0.1
2,139,478 + A4249_RS10645 0.44 -0.2
2,139,478 + A4249_RS10645 0.44 -0.5
2,139,479 - A4249_RS10645 0.45 -0.6
2,139,479 - A4249_RS10645 0.45 +0.4
2,139,479 - A4249_RS10645 0.45 -0.4
2,139,479 - A4249_RS10645 0.45 +0.3
2,139,479 - A4249_RS10645 0.45 +0.4
2,139,479 - A4249_RS10645 0.45 -0.5
2,139,639 + A4249_RS10645 0.68 -0.1
2,139,639 + A4249_RS10645 0.68 -1.2
2,139,639 + A4249_RS10645 0.68 -1.8
2,139,639 + A4249_RS10645 0.68 +0.9
2,139,639 + A4249_RS10645 0.68 -0.5
2,139,639 + A4249_RS10645 0.68 -0.6
2,139,639 + A4249_RS10645 0.68 +0.2
2,139,639 + A4249_RS10645 0.68 +1.9
2,139,640 - A4249_RS10645 0.68 +0.1
2,139,640 - A4249_RS10645 0.68 +0.2
2,139,640 - A4249_RS10645 0.68 -0.3
2,139,640 - A4249_RS10645 0.68 -0.3
2,139,749 + A4249_RS10645 0.84 -0.3
2,139,749 + A4249_RS10645 0.84 -1.3
2,139,749 + A4249_RS10645 0.84 -0.1
2,139,749 + A4249_RS10645 0.84 -0.3
2,139,749 + A4249_RS10645 0.84 +0.1
2,139,749 + A4249_RS10645 0.84 -0.1
2,139,749 + A4249_RS10645 0.84 -0.8
2,139,749 + A4249_RS10645 0.84 +0.8
2,139,749 + A4249_RS10645 0.84 -0.9
2,139,749 + A4249_RS10645 0.84 -0.7
2,139,749 + A4249_RS10645 0.84 -0.1
2,139,749 + A4249_RS10645 0.84 +0.1
2,139,749 + A4249_RS10645 0.84 -1.0
2,139,749 + A4249_RS10645 0.84 -1.2
2,139,749 + A4249_RS10645 0.84 +0.3
2,139,750 - A4249_RS10645 0.85 -0.4
2,139,750 - A4249_RS10645 0.85 +0.3
2,139,750 - A4249_RS10645 0.85 -0.4
2,139,750 - A4249_RS10645 0.85 -0.4
2,139,750 - A4249_RS10645 0.85 +0.3
2,139,750 - A4249_RS10645 0.85 -0.4
2,139,750 - A4249_RS10645 0.85 -0.3
2,139,750 - A4249_RS10645 0.85 +0.1
2,139,897 + -0.4
2,140,666 + +0.7
2,140,667 - -0.6
2,140,667 - -0.5
2,140,686 + +0.7
2,140,687 - -0.2
2,140,867 - +0.6
2,140,926 + A4249_RS10655 0.10 +0.1
2,140,930 - A4249_RS10655 0.10 +0.6
2,141,608 - A4249_RS10655 0.39 +1.6

Or see this region's nucleotide sequence