Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS10595 and A4249_RS10600 are separated by 74 nucleotides A4249_RS10600 and A4249_RS16955 are separated by 110 nucleotides A4249_RS16955 and A4249_RS16960 overlap by 4 nucleotides
A4249_RS10595: A4249_RS10595 - RNA polymerase sigma factor RpoD, at 2,127,898 to 2,129,844
_RS10595
A4249_RS10600: A4249_RS10600 - DNA primase, at 2,129,919 to 2,131,778
_RS10600
A4249_RS16955: A4249_RS16955 - hypothetical protein, at 2,131,889 to 2,132,542
_RS16955
A4249_RS16960: A4249_RS16960 - transcriptional regulator, at 2,132,539 to 2,132,814
_RS16960
Position (kb)
2129
2130
2131
2132 Strain fitness (log2 ratio)
-1
0
1 at 2129.915 kb on - strand at 2129.915 kb on - strand at 2129.921 kb on - strand at 2129.921 kb on - strand at 2129.921 kb on - strand at 2131.790 kb on - strand at 2131.790 kb on - strand at 2131.931 kb on + strand at 2131.931 kb on + strand at 2131.932 kb on - strand at 2131.932 kb on - strand at 2132.009 kb on + strand, within A4249_RS16955 at 2132.010 kb on - strand, within A4249_RS16955 at 2132.010 kb on - strand, within A4249_RS16955 at 2132.010 kb on - strand, within A4249_RS16955 at 2132.096 kb on - strand, within A4249_RS16955 at 2132.096 kb on - strand, within A4249_RS16955 at 2132.096 kb on - strand, within A4249_RS16955 at 2132.096 kb on - strand, within A4249_RS16955 at 2132.119 kb on + strand, within A4249_RS16955 at 2132.119 kb on + strand, within A4249_RS16955 at 2132.119 kb on + strand, within A4249_RS16955 at 2132.119 kb on + strand, within A4249_RS16955 at 2132.119 kb on + strand, within A4249_RS16955 at 2132.119 kb on + strand, within A4249_RS16955 at 2132.119 kb on + strand, within A4249_RS16955 at 2132.120 kb on - strand, within A4249_RS16955 at 2132.120 kb on - strand, within A4249_RS16955 at 2132.121 kb on + strand, within A4249_RS16955 at 2132.121 kb on + strand, within A4249_RS16955 at 2132.121 kb on + strand, within A4249_RS16955 at 2132.121 kb on + strand, within A4249_RS16955 at 2132.121 kb on + strand, within A4249_RS16955 at 2132.121 kb on + strand, within A4249_RS16955 at 2132.122 kb on - strand, within A4249_RS16955 at 2132.122 kb on - strand, within A4249_RS16955 at 2132.122 kb on - strand, within A4249_RS16955 at 2132.122 kb on - strand, within A4249_RS16955 at 2132.187 kb on + strand, within A4249_RS16955 at 2132.187 kb on + strand, within A4249_RS16955 at 2132.187 kb on + strand, within A4249_RS16955 at 2132.187 kb on + strand, within A4249_RS16955 at 2132.188 kb on - strand, within A4249_RS16955 at 2132.188 kb on - strand, within A4249_RS16955 at 2132.188 kb on - strand, within A4249_RS16955 at 2132.188 kb on - strand, within A4249_RS16955 at 2132.188 kb on - strand, within A4249_RS16955 at 2132.209 kb on + strand, within A4249_RS16955 at 2132.210 kb on - strand, within A4249_RS16955 at 2132.273 kb on - strand, within A4249_RS16955 at 2132.273 kb on - strand, within A4249_RS16955 at 2132.341 kb on - strand, within A4249_RS16955 at 2132.490 kb on + strand at 2132.490 kb on + strand at 2132.491 kb on - strand at 2132.491 kb on - strand at 2132.582 kb on + strand, within A4249_RS16960 at 2132.582 kb on + strand, within A4249_RS16960 at 2132.582 kb on + strand, within A4249_RS16960 at 2132.583 kb on - strand, within A4249_RS16960 at 2132.602 kb on + strand, within A4249_RS16960 at 2132.602 kb on + strand, within A4249_RS16960 at 2132.602 kb on + strand, within A4249_RS16960 at 2132.603 kb on - strand, within A4249_RS16960 at 2132.603 kb on - strand, within A4249_RS16960 at 2132.603 kb on - strand, within A4249_RS16960 at 2132.603 kb on - strand, within A4249_RS16960 at 2132.603 kb on - strand, within A4249_RS16960 at 2132.603 kb on - strand, within A4249_RS16960 at 2132.707 kb on + strand, within A4249_RS16960 at 2132.707 kb on + strand, within A4249_RS16960 at 2132.708 kb on - strand, within A4249_RS16960 at 2132.708 kb on - strand, within A4249_RS16960 at 2132.709 kb on + strand, within A4249_RS16960 at 2132.709 kb on + strand, within A4249_RS16960 at 2132.710 kb on - strand, within A4249_RS16960 at 2132.710 kb on - strand, within A4249_RS16960 at 2132.710 kb on - strand, within A4249_RS16960
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,129,915 - -0.1 2,129,915 - +1.7 2,129,921 - -0.9 2,129,921 - -0.1 2,129,921 - +0.3 2,131,790 - -1.1 2,131,790 - -0.5 2,131,931 + +0.0 2,131,931 + +0.4 2,131,932 - -1.0 2,131,932 - +0.1 2,132,009 + A4249_RS16955 0.18 +1.5 2,132,010 - A4249_RS16955 0.19 -0.2 2,132,010 - A4249_RS16955 0.19 +0.2 2,132,010 - A4249_RS16955 0.19 -0.2 2,132,096 - A4249_RS16955 0.32 -1.4 2,132,096 - A4249_RS16955 0.32 -1.2 2,132,096 - A4249_RS16955 0.32 -0.4 2,132,096 - A4249_RS16955 0.32 +0.4 2,132,119 + A4249_RS16955 0.35 +0.5 2,132,119 + A4249_RS16955 0.35 -0.7 2,132,119 + A4249_RS16955 0.35 -0.0 2,132,119 + A4249_RS16955 0.35 -1.0 2,132,119 + A4249_RS16955 0.35 -0.2 2,132,119 + A4249_RS16955 0.35 -0.6 2,132,119 + A4249_RS16955 0.35 +0.0 2,132,120 - A4249_RS16955 0.35 +0.7 2,132,120 - A4249_RS16955 0.35 -0.4 2,132,121 + A4249_RS16955 0.35 -0.4 2,132,121 + A4249_RS16955 0.35 -0.5 2,132,121 + A4249_RS16955 0.35 -0.3 2,132,121 + A4249_RS16955 0.35 -0.1 2,132,121 + A4249_RS16955 0.35 +0.4 2,132,121 + A4249_RS16955 0.35 -0.0 2,132,122 - A4249_RS16955 0.36 +0.1 2,132,122 - A4249_RS16955 0.36 +0.1 2,132,122 - A4249_RS16955 0.36 -0.9 2,132,122 - A4249_RS16955 0.36 +0.3 2,132,187 + A4249_RS16955 0.46 +0.4 2,132,187 + A4249_RS16955 0.46 +1.1 2,132,187 + A4249_RS16955 0.46 +0.4 2,132,187 + A4249_RS16955 0.46 -0.4 2,132,188 - A4249_RS16955 0.46 +0.2 2,132,188 - A4249_RS16955 0.46 -0.3 2,132,188 - A4249_RS16955 0.46 +0.5 2,132,188 - A4249_RS16955 0.46 -0.5 2,132,188 - A4249_RS16955 0.46 +0.8 2,132,209 + A4249_RS16955 0.49 -0.7 2,132,210 - A4249_RS16955 0.49 +0.7 2,132,273 - A4249_RS16955 0.59 +1.4 2,132,273 - A4249_RS16955 0.59 +0.6 2,132,341 - A4249_RS16955 0.69 -0.7 2,132,490 + +0.1 2,132,490 + -0.1 2,132,491 - +0.2 2,132,491 - +0.0 2,132,582 + A4249_RS16960 0.16 +0.1 2,132,582 + A4249_RS16960 0.16 -0.1 2,132,582 + A4249_RS16960 0.16 +0.1 2,132,583 - A4249_RS16960 0.16 +1.1 2,132,602 + A4249_RS16960 0.23 -0.5 2,132,602 + A4249_RS16960 0.23 -0.4 2,132,602 + A4249_RS16960 0.23 -0.4 2,132,603 - A4249_RS16960 0.23 -0.0 2,132,603 - A4249_RS16960 0.23 +0.8 2,132,603 - A4249_RS16960 0.23 -0.7 2,132,603 - A4249_RS16960 0.23 +0.4 2,132,603 - A4249_RS16960 0.23 -0.9 2,132,603 - A4249_RS16960 0.23 -1.1 2,132,707 + A4249_RS16960 0.61 -0.4 2,132,707 + A4249_RS16960 0.61 +0.1 2,132,708 - A4249_RS16960 0.61 +0.6 2,132,708 - A4249_RS16960 0.61 +0.1 2,132,709 + A4249_RS16960 0.62 +0.6 2,132,709 + A4249_RS16960 0.62 +0.4 2,132,710 - A4249_RS16960 0.62 +0.4 2,132,710 - A4249_RS16960 0.62 +0.0 2,132,710 - A4249_RS16960 0.62 -0.1
Or see this region's nucleotide sequence