Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS10440

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS10430 and A4249_RS10435 are separated by 214 nucleotidesA4249_RS10435 and A4249_RS10440 are separated by 3 nucleotidesA4249_RS10440 and A4249_RS10445 are separated by 165 nucleotides A4249_RS10430: A4249_RS10430 - S1/P1 Nuclease, at 2,096,517 to 2,097,536 _RS10430 A4249_RS10435: A4249_RS10435 - DUF4168 domain-containing protein, at 2,097,751 to 2,098,371 _RS10435 A4249_RS10440: A4249_RS10440 - monovalent cation:proton antiporter-2 (CPA2) family protein, at 2,098,375 to 2,100,237 _RS10440 A4249_RS10445: A4249_RS10445 - von Willebrand factor type A domain-containing protein, at 2,100,403 to 2,102,244 _RS10445 Position (kb) 2098 2099 2100 2101Strain fitness (log2 ratio) -2 -1 0 1 2at 2097.567 kb on + strandat 2097.568 kb on - strandat 2097.626 kb on + strandat 2097.626 kb on + strandat 2097.626 kb on + strandat 2097.626 kb on + strandat 2097.627 kb on - strandat 2097.627 kb on - strandat 2097.627 kb on - strandat 2097.631 kb on + strandat 2097.631 kb on + strandat 2097.631 kb on + strandat 2097.631 kb on + strandat 2097.632 kb on - strandat 2097.632 kb on - strandat 2097.632 kb on - strandat 2098.312 kb on + strandat 2098.312 kb on + strandat 2098.312 kb on + strandat 2098.313 kb on - strandat 2098.313 kb on - strandat 2098.370 kb on - strandat 2098.370 kb on - strandat 2098.466 kb on + strandat 2098.466 kb on + strandat 2098.466 kb on + strandat 2098.466 kb on + strandat 2098.466 kb on + strandat 2098.466 kb on + strandat 2098.467 kb on - strandat 2098.467 kb on - strandat 2098.673 kb on + strand, within A4249_RS10440at 2098.674 kb on - strand, within A4249_RS10440at 2098.871 kb on + strand, within A4249_RS10440at 2098.871 kb on + strand, within A4249_RS10440at 2098.871 kb on + strand, within A4249_RS10440at 2098.871 kb on + strand, within A4249_RS10440at 2098.872 kb on - strand, within A4249_RS10440at 2098.872 kb on - strand, within A4249_RS10440at 2098.874 kb on + strand, within A4249_RS10440at 2098.874 kb on + strand, within A4249_RS10440at 2098.874 kb on + strand, within A4249_RS10440at 2098.875 kb on - strand, within A4249_RS10440at 2098.875 kb on - strand, within A4249_RS10440at 2098.875 kb on - strand, within A4249_RS10440at 2099.192 kb on + strand, within A4249_RS10440at 2099.192 kb on + strand, within A4249_RS10440at 2099.193 kb on - strand, within A4249_RS10440at 2099.193 kb on - strand, within A4249_RS10440at 2099.285 kb on + strand, within A4249_RS10440at 2099.285 kb on + strand, within A4249_RS10440at 2099.285 kb on + strand, within A4249_RS10440at 2099.285 kb on + strand, within A4249_RS10440at 2099.285 kb on + strand, within A4249_RS10440at 2099.285 kb on + strand, within A4249_RS10440at 2099.285 kb on + strand, within A4249_RS10440at 2099.285 kb on + strand, within A4249_RS10440at 2099.285 kb on + strand, within A4249_RS10440at 2099.285 kb on + strand, within A4249_RS10440at 2099.286 kb on - strand, within A4249_RS10440at 2099.286 kb on - strand, within A4249_RS10440at 2099.286 kb on - strand, within A4249_RS10440at 2099.286 kb on - strand, within A4249_RS10440at 2099.286 kb on - strand, within A4249_RS10440at 2099.286 kb on - strand, within A4249_RS10440at 2099.286 kb on - strand, within A4249_RS10440at 2099.286 kb on - strand, within A4249_RS10440at 2099.583 kb on - strand, within A4249_RS10440at 2099.618 kb on + strand, within A4249_RS10440at 2099.618 kb on + strand, within A4249_RS10440at 2099.618 kb on + strand, within A4249_RS10440at 2099.618 kb on + strand, within A4249_RS10440at 2099.618 kb on + strand, within A4249_RS10440at 2099.618 kb on + strand, within A4249_RS10440at 2099.618 kb on + strand, within A4249_RS10440at 2099.618 kb on + strand, within A4249_RS10440at 2099.619 kb on - strand, within A4249_RS10440at 2099.619 kb on - strand, within A4249_RS10440at 2099.619 kb on - strand, within A4249_RS10440at 2099.619 kb on - strand, within A4249_RS10440at 2099.619 kb on - strand, within A4249_RS10440at 2099.619 kb on - strand, within A4249_RS10440at 2100.125 kb on + strandat 2100.125 kb on + strandat 2100.126 kb on - strandat 2100.261 kb on + strandat 2100.261 kb on + strandat 2100.261 kb on + strandat 2100.261 kb on + strandat 2100.261 kb on + strandat 2100.262 kb on - strandat 2100.276 kb on + strandat 2100.327 kb on + strandat 2100.327 kb on + strandat 2100.327 kb on + strandat 2100.327 kb on + strandat 2100.327 kb on + strandat 2100.328 kb on - strandat 2100.328 kb on - strandat 2100.413 kb on + strandat 2100.413 kb on + strandat 2100.618 kb on + strand, within A4249_RS10445at 2100.732 kb on + strand, within A4249_RS10445at 2100.732 kb on + strand, within A4249_RS10445at 2100.732 kb on + strand, within A4249_RS10445at 2100.732 kb on + strand, within A4249_RS10445at 2100.732 kb on + strand, within A4249_RS10445at 2100.733 kb on - strand, within A4249_RS10445at 2100.733 kb on - strand, within A4249_RS10445at 2100.733 kb on - strand, within A4249_RS10445at 2100.733 kb on - strand, within A4249_RS10445at 2100.907 kb on + strand, within A4249_RS10445at 2100.907 kb on + strand, within A4249_RS10445at 2100.908 kb on - strand, within A4249_RS10445at 2100.994 kb on + strand, within A4249_RS10445at 2100.994 kb on + strand, within A4249_RS10445at 2100.995 kb on - strand, within A4249_RS10445at 2100.995 kb on - strand, within A4249_RS10445at 2101.000 kb on + strand, within A4249_RS10445at 2101.000 kb on + strand, within A4249_RS10445at 2101.000 kb on + strand, within A4249_RS10445at 2101.000 kb on + strand, within A4249_RS10445at 2101.000 kb on + strand, within A4249_RS10445at 2101.000 kb on + strand, within A4249_RS10445at 2101.000 kb on + strand, within A4249_RS10445at 2101.000 kb on + strand, within A4249_RS10445at 2101.000 kb on + strand, within A4249_RS10445at 2101.000 kb on + strand, within A4249_RS10445at 2101.000 kb on + strand, within A4249_RS10445at 2101.001 kb on - strand, within A4249_RS10445at 2101.001 kb on - strand, within A4249_RS10445at 2101.001 kb on - strand, within A4249_RS10445at 2101.001 kb on - strand, within A4249_RS10445at 2101.001 kb on - strand, within A4249_RS10445at 2101.001 kb on - strand, within A4249_RS10445at 2101.001 kb on - strand, within A4249_RS10445at 2101.001 kb on - strand, within A4249_RS10445at 2101.105 kb on + strand, within A4249_RS10445at 2101.105 kb on + strand, within A4249_RS10445at 2101.105 kb on + strand, within A4249_RS10445at 2101.106 kb on - strand, within A4249_RS10445at 2101.106 kb on - strand, within A4249_RS10445

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,097,567 + -1.0
2,097,568 - -0.3
2,097,626 + +0.4
2,097,626 + +0.1
2,097,626 + +0.1
2,097,626 + +0.4
2,097,627 - -0.2
2,097,627 - -0.3
2,097,627 - -0.3
2,097,631 + +0.1
2,097,631 + -1.7
2,097,631 + -0.2
2,097,631 + +0.4
2,097,632 - -1.4
2,097,632 - +0.1
2,097,632 - -0.2
2,098,312 + -0.3
2,098,312 + -0.0
2,098,312 + -0.9
2,098,313 - +0.9
2,098,313 - -0.9
2,098,370 - +0.7
2,098,370 - +0.9
2,098,466 + -0.0
2,098,466 + -1.1
2,098,466 + +0.3
2,098,466 + +0.1
2,098,466 + -0.5
2,098,466 + -0.0
2,098,467 - +0.1
2,098,467 - +0.8
2,098,673 + A4249_RS10440 0.16 -0.5
2,098,674 - A4249_RS10440 0.16 -0.4
2,098,871 + A4249_RS10440 0.27 -0.6
2,098,871 + A4249_RS10440 0.27 +0.2
2,098,871 + A4249_RS10440 0.27 -1.3
2,098,871 + A4249_RS10440 0.27 +0.1
2,098,872 - A4249_RS10440 0.27 -0.4
2,098,872 - A4249_RS10440 0.27 +0.4
2,098,874 + A4249_RS10440 0.27 -0.0
2,098,874 + A4249_RS10440 0.27 -1.3
2,098,874 + A4249_RS10440 0.27 -0.3
2,098,875 - A4249_RS10440 0.27 +0.7
2,098,875 - A4249_RS10440 0.27 -0.1
2,098,875 - A4249_RS10440 0.27 -1.0
2,099,192 + A4249_RS10440 0.44 +0.0
2,099,192 + A4249_RS10440 0.44 +0.7
2,099,193 - A4249_RS10440 0.44 -0.3
2,099,193 - A4249_RS10440 0.44 +0.3
2,099,285 + A4249_RS10440 0.49 +0.3
2,099,285 + A4249_RS10440 0.49 -0.4
2,099,285 + A4249_RS10440 0.49 -1.1
2,099,285 + A4249_RS10440 0.49 -0.2
2,099,285 + A4249_RS10440 0.49 +2.1
2,099,285 + A4249_RS10440 0.49 +0.3
2,099,285 + A4249_RS10440 0.49 -1.6
2,099,285 + A4249_RS10440 0.49 -1.0
2,099,285 + A4249_RS10440 0.49 +0.1
2,099,285 + A4249_RS10440 0.49 +1.0
2,099,286 - A4249_RS10440 0.49 +1.1
2,099,286 - A4249_RS10440 0.49 +0.1
2,099,286 - A4249_RS10440 0.49 -0.2
2,099,286 - A4249_RS10440 0.49 +0.7
2,099,286 - A4249_RS10440 0.49 +0.3
2,099,286 - A4249_RS10440 0.49 +0.8
2,099,286 - A4249_RS10440 0.49 -0.4
2,099,286 - A4249_RS10440 0.49 -0.3
2,099,583 - A4249_RS10440 0.65 -0.3
2,099,618 + A4249_RS10440 0.67 -0.7
2,099,618 + A4249_RS10440 0.67 +0.2
2,099,618 + A4249_RS10440 0.67 +0.4
2,099,618 + A4249_RS10440 0.67 +1.0
2,099,618 + A4249_RS10440 0.67 -0.7
2,099,618 + A4249_RS10440 0.67 +0.3
2,099,618 + A4249_RS10440 0.67 +1.3
2,099,618 + A4249_RS10440 0.67 -0.4
2,099,619 - A4249_RS10440 0.67 +0.5
2,099,619 - A4249_RS10440 0.67 -1.1
2,099,619 - A4249_RS10440 0.67 -0.9
2,099,619 - A4249_RS10440 0.67 -0.3
2,099,619 - A4249_RS10440 0.67 -0.2
2,099,619 - A4249_RS10440 0.67 +0.3
2,100,125 + +0.0
2,100,125 + -0.4
2,100,126 - -0.4
2,100,261 + -0.4
2,100,261 + -0.4
2,100,261 + -0.4
2,100,261 + +0.4
2,100,261 + -0.0
2,100,262 - +0.2
2,100,276 + -0.2
2,100,327 + -0.9
2,100,327 + -0.5
2,100,327 + -1.8
2,100,327 + -0.2
2,100,327 + -0.3
2,100,328 - +0.2
2,100,328 - +0.1
2,100,413 + -0.2
2,100,413 + -0.7
2,100,618 + A4249_RS10445 0.12 +0.2
2,100,732 + A4249_RS10445 0.18 -0.3
2,100,732 + A4249_RS10445 0.18 +0.2
2,100,732 + A4249_RS10445 0.18 +0.6
2,100,732 + A4249_RS10445 0.18 -0.4
2,100,732 + A4249_RS10445 0.18 -0.4
2,100,733 - A4249_RS10445 0.18 +0.4
2,100,733 - A4249_RS10445 0.18 -0.9
2,100,733 - A4249_RS10445 0.18 +0.1
2,100,733 - A4249_RS10445 0.18 +0.1
2,100,907 + A4249_RS10445 0.27 +0.1
2,100,907 + A4249_RS10445 0.27 -0.3
2,100,908 - A4249_RS10445 0.27 -0.8
2,100,994 + A4249_RS10445 0.32 -0.4
2,100,994 + A4249_RS10445 0.32 +0.2
2,100,995 - A4249_RS10445 0.32 -0.1
2,100,995 - A4249_RS10445 0.32 -0.4
2,101,000 + A4249_RS10445 0.32 +1.1
2,101,000 + A4249_RS10445 0.32 -0.6
2,101,000 + A4249_RS10445 0.32 +0.1
2,101,000 + A4249_RS10445 0.32 -0.9
2,101,000 + A4249_RS10445 0.32 +0.6
2,101,000 + A4249_RS10445 0.32 +0.9
2,101,000 + A4249_RS10445 0.32 +0.3
2,101,000 + A4249_RS10445 0.32 +0.0
2,101,000 + A4249_RS10445 0.32 -0.2
2,101,000 + A4249_RS10445 0.32 +0.4
2,101,000 + A4249_RS10445 0.32 -0.0
2,101,001 - A4249_RS10445 0.32 +0.2
2,101,001 - A4249_RS10445 0.32 -0.2
2,101,001 - A4249_RS10445 0.32 -0.4
2,101,001 - A4249_RS10445 0.32 +0.6
2,101,001 - A4249_RS10445 0.32 -0.4
2,101,001 - A4249_RS10445 0.32 -0.2
2,101,001 - A4249_RS10445 0.32 +0.2
2,101,001 - A4249_RS10445 0.32 +0.8
2,101,105 + A4249_RS10445 0.38 -0.5
2,101,105 + A4249_RS10445 0.38 -0.3
2,101,105 + A4249_RS10445 0.38 -0.4
2,101,106 - A4249_RS10445 0.38 +0.6
2,101,106 - A4249_RS10445 0.38 -0.4

Or see this region's nucleotide sequence