Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS10435

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS10430 and A4249_RS10435 are separated by 214 nucleotidesA4249_RS10435 and A4249_RS10440 are separated by 3 nucleotides A4249_RS10430: A4249_RS10430 - S1/P1 Nuclease, at 2,096,517 to 2,097,536 _RS10430 A4249_RS10435: A4249_RS10435 - DUF4168 domain-containing protein, at 2,097,751 to 2,098,371 _RS10435 A4249_RS10440: A4249_RS10440 - monovalent cation:proton antiporter-2 (CPA2) family protein, at 2,098,375 to 2,100,237 _RS10440 Position (kb) 2097 2098 2099Strain fitness (log2 ratio) -2 -1 0 1 2at 2096.770 kb on + strand, within A4249_RS10430at 2096.770 kb on + strand, within A4249_RS10430at 2096.770 kb on + strand, within A4249_RS10430at 2096.771 kb on - strand, within A4249_RS10430at 2096.941 kb on + strand, within A4249_RS10430at 2096.941 kb on + strand, within A4249_RS10430at 2096.941 kb on + strand, within A4249_RS10430at 2096.941 kb on + strand, within A4249_RS10430at 2096.941 kb on + strand, within A4249_RS10430at 2096.942 kb on - strand, within A4249_RS10430at 2096.942 kb on - strand, within A4249_RS10430at 2096.942 kb on - strand, within A4249_RS10430at 2096.942 kb on - strand, within A4249_RS10430at 2096.942 kb on - strand, within A4249_RS10430at 2096.942 kb on - strand, within A4249_RS10430at 2096.983 kb on + strand, within A4249_RS10430at 2096.983 kb on + strand, within A4249_RS10430at 2096.983 kb on + strand, within A4249_RS10430at 2096.983 kb on + strand, within A4249_RS10430at 2096.984 kb on - strand, within A4249_RS10430at 2096.984 kb on - strand, within A4249_RS10430at 2097.047 kb on - strand, within A4249_RS10430at 2097.065 kb on + strand, within A4249_RS10430at 2097.066 kb on - strand, within A4249_RS10430at 2097.066 kb on - strand, within A4249_RS10430at 2097.152 kb on - strand, within A4249_RS10430at 2097.161 kb on - strand, within A4249_RS10430at 2097.208 kb on + strand, within A4249_RS10430at 2097.259 kb on + strand, within A4249_RS10430at 2097.260 kb on - strand, within A4249_RS10430at 2097.260 kb on - strand, within A4249_RS10430at 2097.260 kb on - strand, within A4249_RS10430at 2097.567 kb on + strandat 2097.568 kb on - strandat 2097.626 kb on + strandat 2097.626 kb on + strandat 2097.626 kb on + strandat 2097.626 kb on + strandat 2097.627 kb on - strandat 2097.627 kb on - strandat 2097.627 kb on - strandat 2097.631 kb on + strandat 2097.631 kb on + strandat 2097.631 kb on + strandat 2097.631 kb on + strandat 2097.632 kb on - strandat 2097.632 kb on - strandat 2097.632 kb on - strandat 2098.312 kb on + strandat 2098.312 kb on + strandat 2098.312 kb on + strandat 2098.313 kb on - strandat 2098.313 kb on - strandat 2098.370 kb on - strandat 2098.370 kb on - strandat 2098.466 kb on + strandat 2098.466 kb on + strandat 2098.466 kb on + strandat 2098.466 kb on + strandat 2098.466 kb on + strandat 2098.466 kb on + strandat 2098.467 kb on - strandat 2098.467 kb on - strandat 2098.673 kb on + strand, within A4249_RS10440at 2098.674 kb on - strand, within A4249_RS10440at 2098.871 kb on + strand, within A4249_RS10440at 2098.871 kb on + strand, within A4249_RS10440at 2098.871 kb on + strand, within A4249_RS10440at 2098.871 kb on + strand, within A4249_RS10440at 2098.872 kb on - strand, within A4249_RS10440at 2098.872 kb on - strand, within A4249_RS10440at 2098.874 kb on + strand, within A4249_RS10440at 2098.874 kb on + strand, within A4249_RS10440at 2098.874 kb on + strand, within A4249_RS10440at 2098.875 kb on - strand, within A4249_RS10440at 2098.875 kb on - strand, within A4249_RS10440at 2098.875 kb on - strand, within A4249_RS10440at 2099.192 kb on + strand, within A4249_RS10440at 2099.192 kb on + strand, within A4249_RS10440at 2099.193 kb on - strand, within A4249_RS10440at 2099.193 kb on - strand, within A4249_RS10440at 2099.285 kb on + strand, within A4249_RS10440at 2099.285 kb on + strand, within A4249_RS10440at 2099.285 kb on + strand, within A4249_RS10440at 2099.285 kb on + strand, within A4249_RS10440at 2099.285 kb on + strand, within A4249_RS10440at 2099.285 kb on + strand, within A4249_RS10440at 2099.285 kb on + strand, within A4249_RS10440at 2099.285 kb on + strand, within A4249_RS10440at 2099.285 kb on + strand, within A4249_RS10440at 2099.285 kb on + strand, within A4249_RS10440at 2099.286 kb on - strand, within A4249_RS10440at 2099.286 kb on - strand, within A4249_RS10440at 2099.286 kb on - strand, within A4249_RS10440at 2099.286 kb on - strand, within A4249_RS10440at 2099.286 kb on - strand, within A4249_RS10440at 2099.286 kb on - strand, within A4249_RS10440at 2099.286 kb on - strand, within A4249_RS10440at 2099.286 kb on - strand, within A4249_RS10440

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,096,770 + A4249_RS10430 0.25 -2.2
2,096,770 + A4249_RS10430 0.25 -1.8
2,096,770 + A4249_RS10430 0.25 -0.3
2,096,771 - A4249_RS10430 0.25 -0.9
2,096,941 + A4249_RS10430 0.42 -1.3
2,096,941 + A4249_RS10430 0.42 -0.7
2,096,941 + A4249_RS10430 0.42 -0.7
2,096,941 + A4249_RS10430 0.42 -0.9
2,096,941 + A4249_RS10430 0.42 -1.9
2,096,942 - A4249_RS10430 0.42 -0.2
2,096,942 - A4249_RS10430 0.42 -1.1
2,096,942 - A4249_RS10430 0.42 -1.3
2,096,942 - A4249_RS10430 0.42 -1.3
2,096,942 - A4249_RS10430 0.42 -1.7
2,096,942 - A4249_RS10430 0.42 -1.2
2,096,983 + A4249_RS10430 0.46 -1.2
2,096,983 + A4249_RS10430 0.46 -0.9
2,096,983 + A4249_RS10430 0.46 +0.7
2,096,983 + A4249_RS10430 0.46 -1.7
2,096,984 - A4249_RS10430 0.46 -1.3
2,096,984 - A4249_RS10430 0.46 -1.6
2,097,047 - A4249_RS10430 0.52 -0.9
2,097,065 + A4249_RS10430 0.54 -0.4
2,097,066 - A4249_RS10430 0.54 -1.9
2,097,066 - A4249_RS10430 0.54 -1.0
2,097,152 - A4249_RS10430 0.62 -1.1
2,097,161 - A4249_RS10430 0.63 -1.8
2,097,208 + A4249_RS10430 0.68 -0.7
2,097,259 + A4249_RS10430 0.73 +1.3
2,097,260 - A4249_RS10430 0.73 -0.7
2,097,260 - A4249_RS10430 0.73 -1.6
2,097,260 - A4249_RS10430 0.73 -1.3
2,097,567 + -1.0
2,097,568 - -0.3
2,097,626 + +0.4
2,097,626 + +0.1
2,097,626 + +0.1
2,097,626 + +0.4
2,097,627 - -0.2
2,097,627 - -0.3
2,097,627 - -0.3
2,097,631 + +0.1
2,097,631 + -1.7
2,097,631 + -0.2
2,097,631 + +0.4
2,097,632 - -1.4
2,097,632 - +0.1
2,097,632 - -0.2
2,098,312 + -0.3
2,098,312 + -0.0
2,098,312 + -0.9
2,098,313 - +0.9
2,098,313 - -0.9
2,098,370 - +0.7
2,098,370 - +0.9
2,098,466 + -0.0
2,098,466 + -1.1
2,098,466 + +0.3
2,098,466 + +0.1
2,098,466 + -0.5
2,098,466 + -0.0
2,098,467 - +0.1
2,098,467 - +0.8
2,098,673 + A4249_RS10440 0.16 -0.5
2,098,674 - A4249_RS10440 0.16 -0.4
2,098,871 + A4249_RS10440 0.27 -0.6
2,098,871 + A4249_RS10440 0.27 +0.2
2,098,871 + A4249_RS10440 0.27 -1.3
2,098,871 + A4249_RS10440 0.27 +0.1
2,098,872 - A4249_RS10440 0.27 -0.4
2,098,872 - A4249_RS10440 0.27 +0.4
2,098,874 + A4249_RS10440 0.27 -0.0
2,098,874 + A4249_RS10440 0.27 -1.3
2,098,874 + A4249_RS10440 0.27 -0.3
2,098,875 - A4249_RS10440 0.27 +0.7
2,098,875 - A4249_RS10440 0.27 -0.1
2,098,875 - A4249_RS10440 0.27 -1.0
2,099,192 + A4249_RS10440 0.44 +0.0
2,099,192 + A4249_RS10440 0.44 +0.7
2,099,193 - A4249_RS10440 0.44 -0.3
2,099,193 - A4249_RS10440 0.44 +0.3
2,099,285 + A4249_RS10440 0.49 +0.3
2,099,285 + A4249_RS10440 0.49 -0.4
2,099,285 + A4249_RS10440 0.49 -1.1
2,099,285 + A4249_RS10440 0.49 -0.2
2,099,285 + A4249_RS10440 0.49 +2.1
2,099,285 + A4249_RS10440 0.49 +0.3
2,099,285 + A4249_RS10440 0.49 -1.6
2,099,285 + A4249_RS10440 0.49 -1.0
2,099,285 + A4249_RS10440 0.49 +0.1
2,099,285 + A4249_RS10440 0.49 +1.0
2,099,286 - A4249_RS10440 0.49 +1.1
2,099,286 - A4249_RS10440 0.49 +0.1
2,099,286 - A4249_RS10440 0.49 -0.2
2,099,286 - A4249_RS10440 0.49 +0.7
2,099,286 - A4249_RS10440 0.49 +0.3
2,099,286 - A4249_RS10440 0.49 +0.8
2,099,286 - A4249_RS10440 0.49 -0.4
2,099,286 - A4249_RS10440 0.49 -0.3

Or see this region's nucleotide sequence