Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS10075

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS10065 and A4249_RS10070 are separated by 47 nucleotidesA4249_RS10070 and A4249_RS10075 are separated by 107 nucleotidesA4249_RS10075 and A4249_RS10080 are separated by 75 nucleotides A4249_RS10065: A4249_RS10065 - RNA polymerase sigma factor RpoH, at 2,021,269 to 2,022,156 _RS10065 A4249_RS10070: A4249_RS10070 - response regulator, at 2,022,204 to 2,023,016 _RS10070 A4249_RS10075: A4249_RS10075 - adenylosuccinate synthase, at 2,023,124 to 2,024,419 _RS10075 A4249_RS10080: A4249_RS10080 - phosphoserine transaminase, at 2,024,495 to 2,025,655 _RS10080 Position (kb) 2023 2024 2025Strain fitness (log2 ratio) -2 -1 0 1at 2022.159 kb on + strandat 2022.160 kb on - strandat 2022.199 kb on + strandat 2022.199 kb on + strandat 2022.199 kb on + strandat 2022.199 kb on + strandat 2022.199 kb on + strandat 2022.199 kb on + strandat 2022.199 kb on + strandat 2022.200 kb on - strandat 2022.200 kb on - strandat 2022.313 kb on + strand, within A4249_RS10070at 2022.313 kb on + strand, within A4249_RS10070at 2022.313 kb on + strand, within A4249_RS10070at 2022.313 kb on + strand, within A4249_RS10070at 2022.313 kb on + strand, within A4249_RS10070at 2022.313 kb on + strand, within A4249_RS10070at 2022.313 kb on + strand, within A4249_RS10070at 2022.313 kb on + strand, within A4249_RS10070at 2022.314 kb on - strand, within A4249_RS10070at 2022.314 kb on - strand, within A4249_RS10070at 2022.314 kb on - strand, within A4249_RS10070at 2022.314 kb on - strand, within A4249_RS10070at 2022.314 kb on - strand, within A4249_RS10070at 2022.314 kb on - strand, within A4249_RS10070at 2022.314 kb on - strand, within A4249_RS10070at 2022.314 kb on - strand, within A4249_RS10070at 2022.314 kb on - strand, within A4249_RS10070at 2022.314 kb on - strand, within A4249_RS10070at 2022.535 kb on + strand, within A4249_RS10070at 2022.535 kb on + strand, within A4249_RS10070at 2022.535 kb on + strand, within A4249_RS10070at 2022.536 kb on - strand, within A4249_RS10070at 2022.536 kb on - strand, within A4249_RS10070at 2022.574 kb on + strand, within A4249_RS10070at 2022.574 kb on + strand, within A4249_RS10070at 2022.575 kb on - strand, within A4249_RS10070at 2022.855 kb on + strand, within A4249_RS10070at 2022.856 kb on - strand, within A4249_RS10070at 2022.883 kb on + strand, within A4249_RS10070at 2022.884 kb on - strand, within A4249_RS10070at 2022.884 kb on - strand, within A4249_RS10070at 2022.884 kb on - strand, within A4249_RS10070at 2022.884 kb on - strand, within A4249_RS10070at 2022.990 kb on + strandat 2022.990 kb on + strandat 2022.990 kb on + strandat 2022.991 kb on - strandat 2023.061 kb on + strandat 2023.062 kb on - strandat 2023.075 kb on + strandat 2023.075 kb on + strandat 2023.075 kb on + strandat 2023.076 kb on - strandat 2023.076 kb on - strandat 2023.076 kb on - strandat 2024.496 kb on + strandat 2024.497 kb on - strandat 2024.497 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,022,159 + -0.3
2,022,160 - -0.3
2,022,199 + +0.1
2,022,199 + +0.6
2,022,199 + -1.8
2,022,199 + -1.1
2,022,199 + -0.3
2,022,199 + -0.3
2,022,199 + -1.6
2,022,200 - -0.3
2,022,200 - -0.0
2,022,313 + A4249_RS10070 0.13 +0.1
2,022,313 + A4249_RS10070 0.13 -0.5
2,022,313 + A4249_RS10070 0.13 +0.6
2,022,313 + A4249_RS10070 0.13 -0.4
2,022,313 + A4249_RS10070 0.13 -0.9
2,022,313 + A4249_RS10070 0.13 +0.4
2,022,313 + A4249_RS10070 0.13 -0.6
2,022,313 + A4249_RS10070 0.13 +0.2
2,022,314 - A4249_RS10070 0.14 -0.2
2,022,314 - A4249_RS10070 0.14 -0.7
2,022,314 - A4249_RS10070 0.14 +0.9
2,022,314 - A4249_RS10070 0.14 -0.2
2,022,314 - A4249_RS10070 0.14 -0.3
2,022,314 - A4249_RS10070 0.14 -0.1
2,022,314 - A4249_RS10070 0.14 -0.3
2,022,314 - A4249_RS10070 0.14 -0.4
2,022,314 - A4249_RS10070 0.14 +0.3
2,022,314 - A4249_RS10070 0.14 +0.2
2,022,535 + A4249_RS10070 0.41 +0.1
2,022,535 + A4249_RS10070 0.41 +1.1
2,022,535 + A4249_RS10070 0.41 -0.1
2,022,536 - A4249_RS10070 0.41 -0.2
2,022,536 - A4249_RS10070 0.41 +0.8
2,022,574 + A4249_RS10070 0.46 -0.2
2,022,574 + A4249_RS10070 0.46 +0.4
2,022,575 - A4249_RS10070 0.46 -1.0
2,022,855 + A4249_RS10070 0.80 -0.1
2,022,856 - A4249_RS10070 0.80 -0.6
2,022,883 + A4249_RS10070 0.84 -0.8
2,022,884 - A4249_RS10070 0.84 -0.7
2,022,884 - A4249_RS10070 0.84 -0.2
2,022,884 - A4249_RS10070 0.84 -0.6
2,022,884 - A4249_RS10070 0.84 +0.3
2,022,990 + -0.0
2,022,990 + +0.0
2,022,990 + -0.5
2,022,991 - -0.3
2,023,061 + -0.8
2,023,062 - +1.7
2,023,075 + +0.7
2,023,075 + -1.7
2,023,075 + +0.5
2,023,076 - -0.3
2,023,076 - +1.2
2,023,076 - +0.0
2,024,496 + -0.6
2,024,497 - -2.0
2,024,497 - -1.5

Or see this region's nucleotide sequence