Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS10025

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS10020 and A4249_RS10025 are separated by 19 nucleotidesA4249_RS10025 and A4249_RS10030 are separated by 3 nucleotides A4249_RS10020: A4249_RS10020 - acetolactate synthase 2 catalytic subunit, at 2,010,706 to 2,012,418 _RS10020 A4249_RS10025: A4249_RS10025 - ketol-acid reductoisomerase, at 2,012,438 to 2,013,451 _RS10025 A4249_RS10030: A4249_RS10030 - dihydroxy-acid dehydratase, at 2,013,455 to 2,015,194 _RS10030 Position (kb) 2012 2013 2014Strain fitness (log2 ratio) -2 -1 0 1at 2011.763 kb on + strand, within A4249_RS10020at 2011.763 kb on + strand, within A4249_RS10020at 2011.763 kb on + strand, within A4249_RS10020at 2011.763 kb on + strand, within A4249_RS10020at 2011.763 kb on + strand, within A4249_RS10020at 2011.764 kb on - strand, within A4249_RS10020at 2011.764 kb on - strand, within A4249_RS10020at 2011.764 kb on - strand, within A4249_RS10020at 2011.764 kb on - strand, within A4249_RS10020at 2011.764 kb on - strand, within A4249_RS10020at 2011.859 kb on + strand, within A4249_RS10020at 2011.859 kb on + strand, within A4249_RS10020at 2011.859 kb on + strand, within A4249_RS10020at 2011.859 kb on + strand, within A4249_RS10020at 2011.859 kb on + strand, within A4249_RS10020at 2011.860 kb on - strand, within A4249_RS10020at 2011.939 kb on - strand, within A4249_RS10020at 2012.029 kb on - strand, within A4249_RS10020at 2012.083 kb on + strand, within A4249_RS10020at 2012.198 kb on + strand, within A4249_RS10020at 2012.199 kb on - strand, within A4249_RS10020at 2012.199 kb on - strand, within A4249_RS10020at 2012.199 kb on - strand, within A4249_RS10020at 2012.276 kb on + strandat 2012.277 kb on - strandat 2012.277 kb on - strandat 2012.277 kb on - strandat 2012.277 kb on - strandat 2012.277 kb on - strandat 2012.277 kb on - strandat 2012.277 kb on - strandat 2012.544 kb on + strand, within A4249_RS10025at 2012.544 kb on + strand, within A4249_RS10025at 2012.545 kb on - strand, within A4249_RS10025at 2012.545 kb on - strand, within A4249_RS10025at 2012.545 kb on - strand, within A4249_RS10025at 2012.679 kb on + strand, within A4249_RS10025at 2012.679 kb on + strand, within A4249_RS10025at 2012.679 kb on + strand, within A4249_RS10025at 2012.679 kb on + strand, within A4249_RS10025at 2012.680 kb on - strand, within A4249_RS10025at 2012.680 kb on - strand, within A4249_RS10025at 2012.730 kb on + strand, within A4249_RS10025at 2012.730 kb on + strand, within A4249_RS10025at 2012.730 kb on + strand, within A4249_RS10025at 2012.731 kb on - strand, within A4249_RS10025at 2012.731 kb on - strand, within A4249_RS10025at 2012.775 kb on + strand, within A4249_RS10025at 2012.776 kb on - strand, within A4249_RS10025at 2012.947 kb on - strand, within A4249_RS10025at 2012.947 kb on - strand, within A4249_RS10025at 2012.947 kb on - strand, within A4249_RS10025at 2013.108 kb on + strand, within A4249_RS10025at 2013.108 kb on + strand, within A4249_RS10025at 2013.109 kb on - strand, within A4249_RS10025at 2013.109 kb on - strand, within A4249_RS10025at 2013.109 kb on - strand, within A4249_RS10025at 2013.109 kb on - strand, within A4249_RS10025at 2013.109 kb on - strand, within A4249_RS10025at 2013.180 kb on + strand, within A4249_RS10025at 2013.180 kb on + strand, within A4249_RS10025at 2013.180 kb on + strand, within A4249_RS10025at 2013.180 kb on + strand, within A4249_RS10025at 2013.181 kb on - strand, within A4249_RS10025at 2013.181 kb on - strand, within A4249_RS10025at 2013.181 kb on - strand, within A4249_RS10025at 2013.181 kb on - strand, within A4249_RS10025at 2013.435 kb on + strandat 2013.435 kb on + strandat 2013.435 kb on + strandat 2013.435 kb on + strandat 2013.435 kb on + strandat 2013.435 kb on + strandat 2013.435 kb on + strandat 2013.435 kb on + strandat 2013.435 kb on + strandat 2013.435 kb on + strandat 2013.435 kb on + strandat 2013.435 kb on + strandat 2013.435 kb on + strandat 2013.436 kb on - strandat 2013.436 kb on - strandat 2013.436 kb on - strandat 2013.436 kb on - strandat 2013.436 kb on - strandat 2013.436 kb on - strandat 2013.436 kb on - strandat 2013.436 kb on - strandat 2013.436 kb on - strandat 2013.436 kb on - strandat 2013.436 kb on - strandat 2013.436 kb on - strandat 2013.436 kb on - strandat 2013.436 kb on - strandat 2013.445 kb on + strandat 2013.445 kb on + strandat 2013.445 kb on + strandat 2013.446 kb on - strandat 2013.593 kb on + strandat 2013.593 kb on + strandat 2013.593 kb on + strandat 2013.593 kb on + strandat 2013.594 kb on - strandat 2013.604 kb on + strandat 2013.751 kb on - strand, within A4249_RS10030at 2014.026 kb on + strand, within A4249_RS10030at 2014.026 kb on + strand, within A4249_RS10030at 2014.038 kb on + strand, within A4249_RS10030at 2014.038 kb on + strand, within A4249_RS10030at 2014.038 kb on + strand, within A4249_RS10030at 2014.038 kb on + strand, within A4249_RS10030at 2014.039 kb on - strand, within A4249_RS10030at 2014.039 kb on - strand, within A4249_RS10030at 2014.039 kb on - strand, within A4249_RS10030at 2014.079 kb on + strand, within A4249_RS10030at 2014.079 kb on + strand, within A4249_RS10030at 2014.080 kb on - strand, within A4249_RS10030at 2014.413 kb on + strand, within A4249_RS10030at 2014.413 kb on + strand, within A4249_RS10030at 2014.413 kb on + strand, within A4249_RS10030at 2014.413 kb on + strand, within A4249_RS10030at 2014.413 kb on + strand, within A4249_RS10030at 2014.413 kb on + strand, within A4249_RS10030at 2014.413 kb on + strand, within A4249_RS10030at 2014.413 kb on + strand, within A4249_RS10030at 2014.413 kb on + strand, within A4249_RS10030at 2014.413 kb on + strand, within A4249_RS10030at 2014.414 kb on - strand, within A4249_RS10030at 2014.414 kb on - strand, within A4249_RS10030at 2014.414 kb on - strand, within A4249_RS10030at 2014.414 kb on - strand, within A4249_RS10030at 2014.414 kb on - strand, within A4249_RS10030at 2014.414 kb on - strand, within A4249_RS10030at 2014.414 kb on - strand, within A4249_RS10030at 2014.414 kb on - strand, within A4249_RS10030at 2014.414 kb on - strand, within A4249_RS10030at 2014.414 kb on - strand, within A4249_RS10030at 2014.414 kb on - strand, within A4249_RS10030at 2014.414 kb on - strand, within A4249_RS10030at 2014.414 kb on - strand, within A4249_RS10030

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,011,763 + A4249_RS10020 0.62 +0.1
2,011,763 + A4249_RS10020 0.62 +0.1
2,011,763 + A4249_RS10020 0.62 -0.8
2,011,763 + A4249_RS10020 0.62 +0.1
2,011,763 + A4249_RS10020 0.62 +1.6
2,011,764 - A4249_RS10020 0.62 -0.2
2,011,764 - A4249_RS10020 0.62 +0.3
2,011,764 - A4249_RS10020 0.62 -1.3
2,011,764 - A4249_RS10020 0.62 -0.4
2,011,764 - A4249_RS10020 0.62 -0.2
2,011,859 + A4249_RS10020 0.67 +0.1
2,011,859 + A4249_RS10020 0.67 -0.7
2,011,859 + A4249_RS10020 0.67 +0.7
2,011,859 + A4249_RS10020 0.67 -0.9
2,011,859 + A4249_RS10020 0.67 +1.0
2,011,860 - A4249_RS10020 0.67 -0.1
2,011,939 - A4249_RS10020 0.72 -0.1
2,012,029 - A4249_RS10020 0.77 -0.5
2,012,083 + A4249_RS10020 0.80 +0.6
2,012,198 + A4249_RS10020 0.87 -0.3
2,012,199 - A4249_RS10020 0.87 -0.4
2,012,199 - A4249_RS10020 0.87 +0.4
2,012,199 - A4249_RS10020 0.87 +0.3
2,012,276 + +0.5
2,012,277 - +0.6
2,012,277 - +0.7
2,012,277 - -0.2
2,012,277 - -0.7
2,012,277 - -1.1
2,012,277 - -0.9
2,012,277 - +0.4
2,012,544 + A4249_RS10025 0.10 -0.2
2,012,544 + A4249_RS10025 0.10 +0.6
2,012,545 - A4249_RS10025 0.11 -1.0
2,012,545 - A4249_RS10025 0.11 +0.3
2,012,545 - A4249_RS10025 0.11 -1.8
2,012,679 + A4249_RS10025 0.24 -0.4
2,012,679 + A4249_RS10025 0.24 -0.2
2,012,679 + A4249_RS10025 0.24 -0.2
2,012,679 + A4249_RS10025 0.24 -0.5
2,012,680 - A4249_RS10025 0.24 -0.2
2,012,680 - A4249_RS10025 0.24 +0.7
2,012,730 + A4249_RS10025 0.29 -0.3
2,012,730 + A4249_RS10025 0.29 -0.8
2,012,730 + A4249_RS10025 0.29 -0.3
2,012,731 - A4249_RS10025 0.29 +0.2
2,012,731 - A4249_RS10025 0.29 -0.0
2,012,775 + A4249_RS10025 0.33 +0.7
2,012,776 - A4249_RS10025 0.33 +0.9
2,012,947 - A4249_RS10025 0.50 -0.6
2,012,947 - A4249_RS10025 0.50 +0.6
2,012,947 - A4249_RS10025 0.50 +0.6
2,013,108 + A4249_RS10025 0.66 -0.6
2,013,108 + A4249_RS10025 0.66 +0.0
2,013,109 - A4249_RS10025 0.66 -0.2
2,013,109 - A4249_RS10025 0.66 +0.1
2,013,109 - A4249_RS10025 0.66 +0.3
2,013,109 - A4249_RS10025 0.66 +0.2
2,013,109 - A4249_RS10025 0.66 -0.3
2,013,180 + A4249_RS10025 0.73 -0.5
2,013,180 + A4249_RS10025 0.73 +0.3
2,013,180 + A4249_RS10025 0.73 -0.7
2,013,180 + A4249_RS10025 0.73 +0.1
2,013,181 - A4249_RS10025 0.73 -0.8
2,013,181 - A4249_RS10025 0.73 -0.9
2,013,181 - A4249_RS10025 0.73 +0.7
2,013,181 - A4249_RS10025 0.73 +0.3
2,013,435 + +0.6
2,013,435 + -0.4
2,013,435 + +0.4
2,013,435 + +1.2
2,013,435 + +0.4
2,013,435 + -0.4
2,013,435 + +0.0
2,013,435 + -0.0
2,013,435 + -0.3
2,013,435 + -0.2
2,013,435 + -0.3
2,013,435 + +0.5
2,013,435 + -0.8
2,013,436 - -1.0
2,013,436 - +0.0
2,013,436 - +0.4
2,013,436 - +0.3
2,013,436 - +1.1
2,013,436 - +0.4
2,013,436 - +0.4
2,013,436 - +0.8
2,013,436 - -0.1
2,013,436 - -0.1
2,013,436 - -0.2
2,013,436 - -1.0
2,013,436 - -0.0
2,013,436 - +0.4
2,013,445 + -0.1
2,013,445 + -0.6
2,013,445 + +0.2
2,013,446 - +0.1
2,013,593 + -0.4
2,013,593 + -1.6
2,013,593 + -0.2
2,013,593 + +0.6
2,013,594 - -0.3
2,013,604 + +1.1
2,013,751 - A4249_RS10030 0.17 -1.0
2,014,026 + A4249_RS10030 0.33 -1.2
2,014,026 + A4249_RS10030 0.33 -0.7
2,014,038 + A4249_RS10030 0.34 -0.6
2,014,038 + A4249_RS10030 0.34 -0.5
2,014,038 + A4249_RS10030 0.34 -1.1
2,014,038 + A4249_RS10030 0.34 +0.3
2,014,039 - A4249_RS10030 0.34 -0.3
2,014,039 - A4249_RS10030 0.34 -0.6
2,014,039 - A4249_RS10030 0.34 -1.3
2,014,079 + A4249_RS10030 0.36 +0.3
2,014,079 + A4249_RS10030 0.36 -0.3
2,014,080 - A4249_RS10030 0.36 -0.2
2,014,413 + A4249_RS10030 0.55 -0.2
2,014,413 + A4249_RS10030 0.55 +0.6
2,014,413 + A4249_RS10030 0.55 +0.1
2,014,413 + A4249_RS10030 0.55 -1.0
2,014,413 + A4249_RS10030 0.55 -0.4
2,014,413 + A4249_RS10030 0.55 +0.2
2,014,413 + A4249_RS10030 0.55 +0.5
2,014,413 + A4249_RS10030 0.55 -0.3
2,014,413 + A4249_RS10030 0.55 -1.7
2,014,413 + A4249_RS10030 0.55 +0.3
2,014,414 - A4249_RS10030 0.55 +0.7
2,014,414 - A4249_RS10030 0.55 -0.4
2,014,414 - A4249_RS10030 0.55 -0.3
2,014,414 - A4249_RS10030 0.55 -0.6
2,014,414 - A4249_RS10030 0.55 -0.5
2,014,414 - A4249_RS10030 0.55 +0.1
2,014,414 - A4249_RS10030 0.55 -0.3
2,014,414 - A4249_RS10030 0.55 -0.4
2,014,414 - A4249_RS10030 0.55 -1.1
2,014,414 - A4249_RS10030 0.55 +0.3
2,014,414 - A4249_RS10030 0.55 -0.0
2,014,414 - A4249_RS10030 0.55 +0.1
2,014,414 - A4249_RS10030 0.55 -0.3

Or see this region's nucleotide sequence