Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS10020 and A4249_RS10025 are separated by 19 nucleotides A4249_RS10025 and A4249_RS10030 are separated by 3 nucleotides
A4249_RS10020: A4249_RS10020 - acetolactate synthase 2 catalytic subunit, at 2,010,706 to 2,012,418
_RS10020
A4249_RS10025: A4249_RS10025 - ketol-acid reductoisomerase, at 2,012,438 to 2,013,451
_RS10025
A4249_RS10030: A4249_RS10030 - dihydroxy-acid dehydratase, at 2,013,455 to 2,015,194
_RS10030
Position (kb)
2012
2013
2014 Strain fitness (log2 ratio)
-2
-1
0
1 at 2011.763 kb on + strand, within A4249_RS10020 at 2011.763 kb on + strand, within A4249_RS10020 at 2011.763 kb on + strand, within A4249_RS10020 at 2011.763 kb on + strand, within A4249_RS10020 at 2011.763 kb on + strand, within A4249_RS10020 at 2011.764 kb on - strand, within A4249_RS10020 at 2011.764 kb on - strand, within A4249_RS10020 at 2011.764 kb on - strand, within A4249_RS10020 at 2011.764 kb on - strand, within A4249_RS10020 at 2011.764 kb on - strand, within A4249_RS10020 at 2011.859 kb on + strand, within A4249_RS10020 at 2011.859 kb on + strand, within A4249_RS10020 at 2011.859 kb on + strand, within A4249_RS10020 at 2011.859 kb on + strand, within A4249_RS10020 at 2011.859 kb on + strand, within A4249_RS10020 at 2011.860 kb on - strand, within A4249_RS10020 at 2011.939 kb on - strand, within A4249_RS10020 at 2012.029 kb on - strand, within A4249_RS10020 at 2012.083 kb on + strand, within A4249_RS10020 at 2012.198 kb on + strand, within A4249_RS10020 at 2012.199 kb on - strand, within A4249_RS10020 at 2012.199 kb on - strand, within A4249_RS10020 at 2012.199 kb on - strand, within A4249_RS10020 at 2012.276 kb on + strand at 2012.277 kb on - strand at 2012.277 kb on - strand at 2012.277 kb on - strand at 2012.277 kb on - strand at 2012.277 kb on - strand at 2012.277 kb on - strand at 2012.277 kb on - strand at 2012.544 kb on + strand, within A4249_RS10025 at 2012.544 kb on + strand, within A4249_RS10025 at 2012.545 kb on - strand, within A4249_RS10025 at 2012.545 kb on - strand, within A4249_RS10025 at 2012.545 kb on - strand, within A4249_RS10025 at 2012.679 kb on + strand, within A4249_RS10025 at 2012.679 kb on + strand, within A4249_RS10025 at 2012.679 kb on + strand, within A4249_RS10025 at 2012.679 kb on + strand, within A4249_RS10025 at 2012.680 kb on - strand, within A4249_RS10025 at 2012.680 kb on - strand, within A4249_RS10025 at 2012.730 kb on + strand, within A4249_RS10025 at 2012.730 kb on + strand, within A4249_RS10025 at 2012.730 kb on + strand, within A4249_RS10025 at 2012.731 kb on - strand, within A4249_RS10025 at 2012.731 kb on - strand, within A4249_RS10025 at 2012.775 kb on + strand, within A4249_RS10025 at 2012.776 kb on - strand, within A4249_RS10025 at 2012.947 kb on - strand, within A4249_RS10025 at 2012.947 kb on - strand, within A4249_RS10025 at 2012.947 kb on - strand, within A4249_RS10025 at 2013.108 kb on + strand, within A4249_RS10025 at 2013.108 kb on + strand, within A4249_RS10025 at 2013.109 kb on - strand, within A4249_RS10025 at 2013.109 kb on - strand, within A4249_RS10025 at 2013.109 kb on - strand, within A4249_RS10025 at 2013.109 kb on - strand, within A4249_RS10025 at 2013.109 kb on - strand, within A4249_RS10025 at 2013.180 kb on + strand, within A4249_RS10025 at 2013.180 kb on + strand, within A4249_RS10025 at 2013.180 kb on + strand, within A4249_RS10025 at 2013.180 kb on + strand, within A4249_RS10025 at 2013.181 kb on - strand, within A4249_RS10025 at 2013.181 kb on - strand, within A4249_RS10025 at 2013.181 kb on - strand, within A4249_RS10025 at 2013.181 kb on - strand, within A4249_RS10025 at 2013.435 kb on + strand at 2013.435 kb on + strand at 2013.435 kb on + strand at 2013.435 kb on + strand at 2013.435 kb on + strand at 2013.435 kb on + strand at 2013.435 kb on + strand at 2013.435 kb on + strand at 2013.435 kb on + strand at 2013.435 kb on + strand at 2013.435 kb on + strand at 2013.435 kb on + strand at 2013.435 kb on + strand at 2013.436 kb on - strand at 2013.436 kb on - strand at 2013.436 kb on - strand at 2013.436 kb on - strand at 2013.436 kb on - strand at 2013.436 kb on - strand at 2013.436 kb on - strand at 2013.436 kb on - strand at 2013.436 kb on - strand at 2013.436 kb on - strand at 2013.436 kb on - strand at 2013.436 kb on - strand at 2013.436 kb on - strand at 2013.436 kb on - strand at 2013.445 kb on + strand at 2013.445 kb on + strand at 2013.445 kb on + strand at 2013.446 kb on - strand at 2013.593 kb on + strand at 2013.593 kb on + strand at 2013.593 kb on + strand at 2013.593 kb on + strand at 2013.594 kb on - strand at 2013.604 kb on + strand at 2013.751 kb on - strand, within A4249_RS10030 at 2014.026 kb on + strand, within A4249_RS10030 at 2014.026 kb on + strand, within A4249_RS10030 at 2014.038 kb on + strand, within A4249_RS10030 at 2014.038 kb on + strand, within A4249_RS10030 at 2014.038 kb on + strand, within A4249_RS10030 at 2014.038 kb on + strand, within A4249_RS10030 at 2014.039 kb on - strand, within A4249_RS10030 at 2014.039 kb on - strand, within A4249_RS10030 at 2014.039 kb on - strand, within A4249_RS10030 at 2014.079 kb on + strand, within A4249_RS10030 at 2014.079 kb on + strand, within A4249_RS10030 at 2014.080 kb on - strand, within A4249_RS10030 at 2014.413 kb on + strand, within A4249_RS10030 at 2014.413 kb on + strand, within A4249_RS10030 at 2014.413 kb on + strand, within A4249_RS10030 at 2014.413 kb on + strand, within A4249_RS10030 at 2014.413 kb on + strand, within A4249_RS10030 at 2014.413 kb on + strand, within A4249_RS10030 at 2014.413 kb on + strand, within A4249_RS10030 at 2014.413 kb on + strand, within A4249_RS10030 at 2014.413 kb on + strand, within A4249_RS10030 at 2014.413 kb on + strand, within A4249_RS10030 at 2014.414 kb on - strand, within A4249_RS10030 at 2014.414 kb on - strand, within A4249_RS10030 at 2014.414 kb on - strand, within A4249_RS10030 at 2014.414 kb on - strand, within A4249_RS10030 at 2014.414 kb on - strand, within A4249_RS10030 at 2014.414 kb on - strand, within A4249_RS10030 at 2014.414 kb on - strand, within A4249_RS10030 at 2014.414 kb on - strand, within A4249_RS10030 at 2014.414 kb on - strand, within A4249_RS10030 at 2014.414 kb on - strand, within A4249_RS10030 at 2014.414 kb on - strand, within A4249_RS10030 at 2014.414 kb on - strand, within A4249_RS10030 at 2014.414 kb on - strand, within A4249_RS10030
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,011,763 + A4249_RS10020 0.62 +0.1 2,011,763 + A4249_RS10020 0.62 +0.1 2,011,763 + A4249_RS10020 0.62 -0.8 2,011,763 + A4249_RS10020 0.62 +0.1 2,011,763 + A4249_RS10020 0.62 +1.6 2,011,764 - A4249_RS10020 0.62 -0.2 2,011,764 - A4249_RS10020 0.62 +0.3 2,011,764 - A4249_RS10020 0.62 -1.3 2,011,764 - A4249_RS10020 0.62 -0.4 2,011,764 - A4249_RS10020 0.62 -0.2 2,011,859 + A4249_RS10020 0.67 +0.1 2,011,859 + A4249_RS10020 0.67 -0.7 2,011,859 + A4249_RS10020 0.67 +0.7 2,011,859 + A4249_RS10020 0.67 -0.9 2,011,859 + A4249_RS10020 0.67 +1.0 2,011,860 - A4249_RS10020 0.67 -0.1 2,011,939 - A4249_RS10020 0.72 -0.1 2,012,029 - A4249_RS10020 0.77 -0.5 2,012,083 + A4249_RS10020 0.80 +0.6 2,012,198 + A4249_RS10020 0.87 -0.3 2,012,199 - A4249_RS10020 0.87 -0.4 2,012,199 - A4249_RS10020 0.87 +0.4 2,012,199 - A4249_RS10020 0.87 +0.3 2,012,276 + +0.5 2,012,277 - +0.6 2,012,277 - +0.7 2,012,277 - -0.2 2,012,277 - -0.7 2,012,277 - -1.1 2,012,277 - -0.9 2,012,277 - +0.4 2,012,544 + A4249_RS10025 0.10 -0.2 2,012,544 + A4249_RS10025 0.10 +0.6 2,012,545 - A4249_RS10025 0.11 -1.0 2,012,545 - A4249_RS10025 0.11 +0.3 2,012,545 - A4249_RS10025 0.11 -1.8 2,012,679 + A4249_RS10025 0.24 -0.4 2,012,679 + A4249_RS10025 0.24 -0.2 2,012,679 + A4249_RS10025 0.24 -0.2 2,012,679 + A4249_RS10025 0.24 -0.5 2,012,680 - A4249_RS10025 0.24 -0.2 2,012,680 - A4249_RS10025 0.24 +0.7 2,012,730 + A4249_RS10025 0.29 -0.3 2,012,730 + A4249_RS10025 0.29 -0.8 2,012,730 + A4249_RS10025 0.29 -0.3 2,012,731 - A4249_RS10025 0.29 +0.2 2,012,731 - A4249_RS10025 0.29 -0.0 2,012,775 + A4249_RS10025 0.33 +0.7 2,012,776 - A4249_RS10025 0.33 +0.9 2,012,947 - A4249_RS10025 0.50 -0.6 2,012,947 - A4249_RS10025 0.50 +0.6 2,012,947 - A4249_RS10025 0.50 +0.6 2,013,108 + A4249_RS10025 0.66 -0.6 2,013,108 + A4249_RS10025 0.66 +0.0 2,013,109 - A4249_RS10025 0.66 -0.2 2,013,109 - A4249_RS10025 0.66 +0.1 2,013,109 - A4249_RS10025 0.66 +0.3 2,013,109 - A4249_RS10025 0.66 +0.2 2,013,109 - A4249_RS10025 0.66 -0.3 2,013,180 + A4249_RS10025 0.73 -0.5 2,013,180 + A4249_RS10025 0.73 +0.3 2,013,180 + A4249_RS10025 0.73 -0.7 2,013,180 + A4249_RS10025 0.73 +0.1 2,013,181 - A4249_RS10025 0.73 -0.8 2,013,181 - A4249_RS10025 0.73 -0.9 2,013,181 - A4249_RS10025 0.73 +0.7 2,013,181 - A4249_RS10025 0.73 +0.3 2,013,435 + +0.6 2,013,435 + -0.4 2,013,435 + +0.4 2,013,435 + +1.2 2,013,435 + +0.4 2,013,435 + -0.4 2,013,435 + +0.0 2,013,435 + -0.0 2,013,435 + -0.3 2,013,435 + -0.2 2,013,435 + -0.3 2,013,435 + +0.5 2,013,435 + -0.8 2,013,436 - -1.0 2,013,436 - +0.0 2,013,436 - +0.4 2,013,436 - +0.3 2,013,436 - +1.1 2,013,436 - +0.4 2,013,436 - +0.4 2,013,436 - +0.8 2,013,436 - -0.1 2,013,436 - -0.1 2,013,436 - -0.2 2,013,436 - -1.0 2,013,436 - -0.0 2,013,436 - +0.4 2,013,445 + -0.1 2,013,445 + -0.6 2,013,445 + +0.2 2,013,446 - +0.1 2,013,593 + -0.4 2,013,593 + -1.6 2,013,593 + -0.2 2,013,593 + +0.6 2,013,594 - -0.3 2,013,604 + +1.1 2,013,751 - A4249_RS10030 0.17 -1.0 2,014,026 + A4249_RS10030 0.33 -1.2 2,014,026 + A4249_RS10030 0.33 -0.7 2,014,038 + A4249_RS10030 0.34 -0.6 2,014,038 + A4249_RS10030 0.34 -0.5 2,014,038 + A4249_RS10030 0.34 -1.1 2,014,038 + A4249_RS10030 0.34 +0.3 2,014,039 - A4249_RS10030 0.34 -0.3 2,014,039 - A4249_RS10030 0.34 -0.6 2,014,039 - A4249_RS10030 0.34 -1.3 2,014,079 + A4249_RS10030 0.36 +0.3 2,014,079 + A4249_RS10030 0.36 -0.3 2,014,080 - A4249_RS10030 0.36 -0.2 2,014,413 + A4249_RS10030 0.55 -0.2 2,014,413 + A4249_RS10030 0.55 +0.6 2,014,413 + A4249_RS10030 0.55 +0.1 2,014,413 + A4249_RS10030 0.55 -1.0 2,014,413 + A4249_RS10030 0.55 -0.4 2,014,413 + A4249_RS10030 0.55 +0.2 2,014,413 + A4249_RS10030 0.55 +0.5 2,014,413 + A4249_RS10030 0.55 -0.3 2,014,413 + A4249_RS10030 0.55 -1.7 2,014,413 + A4249_RS10030 0.55 +0.3 2,014,414 - A4249_RS10030 0.55 +0.7 2,014,414 - A4249_RS10030 0.55 -0.4 2,014,414 - A4249_RS10030 0.55 -0.3 2,014,414 - A4249_RS10030 0.55 -0.6 2,014,414 - A4249_RS10030 0.55 -0.5 2,014,414 - A4249_RS10030 0.55 +0.1 2,014,414 - A4249_RS10030 0.55 -0.3 2,014,414 - A4249_RS10030 0.55 -0.4 2,014,414 - A4249_RS10030 0.55 -1.1 2,014,414 - A4249_RS10030 0.55 +0.3 2,014,414 - A4249_RS10030 0.55 -0.0 2,014,414 - A4249_RS10030 0.55 +0.1 2,014,414 - A4249_RS10030 0.55 -0.3
Or see this region's nucleotide sequence