Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS09880 and A4249_RS09885 are separated by 240 nucleotides A4249_RS09885 and A4249_RS09890 are separated by 13 nucleotides A4249_RS09890 and A4249_RS09895 overlap by 13 nucleotides
A4249_RS09880: A4249_RS09880 - TonB-dependent receptor, at 1,968,221 to 1,971,487
_RS09880
A4249_RS09885: A4249_RS09885 - cell division protein FtsA, at 1,971,728 to 1,973,062
_RS09885
A4249_RS09890: A4249_RS09890 - FtsQ-type POTRA domain-containing protein, at 1,973,076 to 1,973,963
_RS09890
A4249_RS09895: A4249_RS09895 - D-alanine--D-alanine ligase, at 1,973,951 to 1,974,892
_RS09895
Position (kb)
1971
1972
1973
1974 Strain fitness (log2 ratio)
-2
-1
0
1 at 1970.820 kb on + strand, within A4249_RS09880 at 1970.820 kb on + strand, within A4249_RS09880 at 1970.820 kb on + strand, within A4249_RS09880 at 1970.820 kb on + strand, within A4249_RS09880 at 1970.821 kb on - strand, within A4249_RS09880 at 1970.821 kb on - strand, within A4249_RS09880 at 1970.821 kb on - strand, within A4249_RS09880 at 1970.821 kb on - strand, within A4249_RS09880 at 1970.821 kb on - strand, within A4249_RS09880 at 1970.835 kb on + strand, within A4249_RS09880 at 1970.835 kb on + strand, within A4249_RS09880 at 1970.836 kb on - strand, within A4249_RS09880 at 1970.836 kb on - strand, within A4249_RS09880 at 1970.836 kb on - strand, within A4249_RS09880 at 1970.836 kb on - strand, within A4249_RS09880 at 1970.836 kb on - strand, within A4249_RS09880 at 1970.881 kb on - strand, within A4249_RS09880 at 1971.000 kb on + strand, within A4249_RS09880 at 1971.000 kb on + strand, within A4249_RS09880 at 1971.000 kb on + strand, within A4249_RS09880 at 1971.001 kb on - strand, within A4249_RS09880 at 1971.001 kb on - strand, within A4249_RS09880 at 1971.001 kb on - strand, within A4249_RS09880 at 1971.001 kb on - strand, within A4249_RS09880 at 1971.131 kb on - strand, within A4249_RS09880 at 1971.246 kb on + strand at 1971.247 kb on - strand at 1971.337 kb on + strand at 1971.373 kb on + strand at 1971.468 kb on + strand at 1971.468 kb on + strand at 1971.468 kb on + strand at 1971.472 kb on + strand at 1971.487 kb on + strand at 1971.488 kb on - strand at 1971.503 kb on + strand at 1971.551 kb on + strand at 1971.551 kb on + strand at 1971.552 kb on - strand at 1971.552 kb on - strand at 1971.560 kb on + strand at 1971.568 kb on + strand at 1971.568 kb on + strand at 1971.568 kb on + strand at 1971.568 kb on + strand at 1971.568 kb on + strand at 1971.568 kb on + strand at 1971.568 kb on + strand at 1971.568 kb on + strand at 1971.568 kb on + strand at 1971.568 kb on + strand at 1971.569 kb on - strand at 1971.624 kb on + strand at 1971.624 kb on + strand at 1971.625 kb on - strand at 1971.625 kb on - strand at 1971.625 kb on - strand at 1971.660 kb on + strand at 1971.660 kb on + strand at 1971.660 kb on + strand at 1971.675 kb on + strand at 1971.675 kb on + strand at 1971.675 kb on + strand at 1971.675 kb on + strand at 1971.676 kb on - strand at 1971.719 kb on + strand at 1971.720 kb on - strand at 1971.720 kb on - strand at 1973.069 kb on - strand at 1973.078 kb on - strand at 1973.078 kb on - strand at 1973.078 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 1,970,820 + A4249_RS09880 0.80 -0.4 1,970,820 + A4249_RS09880 0.80 +0.1 1,970,820 + A4249_RS09880 0.80 -1.9 1,970,820 + A4249_RS09880 0.80 +0.8 1,970,821 - A4249_RS09880 0.80 -0.2 1,970,821 - A4249_RS09880 0.80 -1.2 1,970,821 - A4249_RS09880 0.80 -1.3 1,970,821 - A4249_RS09880 0.80 +0.4 1,970,821 - A4249_RS09880 0.80 -0.2 1,970,835 + A4249_RS09880 0.80 +0.0 1,970,835 + A4249_RS09880 0.80 +1.0 1,970,836 - A4249_RS09880 0.80 -0.8 1,970,836 - A4249_RS09880 0.80 -0.6 1,970,836 - A4249_RS09880 0.80 -0.5 1,970,836 - A4249_RS09880 0.80 -0.6 1,970,836 - A4249_RS09880 0.80 -0.4 1,970,881 - A4249_RS09880 0.81 -0.8 1,971,000 + A4249_RS09880 0.85 -0.6 1,971,000 + A4249_RS09880 0.85 -0.1 1,971,000 + A4249_RS09880 0.85 -0.0 1,971,001 - A4249_RS09880 0.85 -0.5 1,971,001 - A4249_RS09880 0.85 +0.0 1,971,001 - A4249_RS09880 0.85 +0.0 1,971,001 - A4249_RS09880 0.85 -0.5 1,971,131 - A4249_RS09880 0.89 -0.9 1,971,246 + +0.3 1,971,247 - +0.9 1,971,337 + +0.2 1,971,373 + +0.6 1,971,468 + -0.1 1,971,468 + +0.1 1,971,468 + +0.7 1,971,472 + -0.9 1,971,487 + +0.3 1,971,488 - -1.0 1,971,503 + -1.4 1,971,551 + -0.3 1,971,551 + -0.1 1,971,552 - +0.1 1,971,552 - +0.5 1,971,560 + -0.3 1,971,568 + +0.3 1,971,568 + -0.1 1,971,568 + -0.4 1,971,568 + -0.7 1,971,568 + +0.5 1,971,568 + -0.4 1,971,568 + +0.7 1,971,568 + -0.9 1,971,568 + -0.2 1,971,568 + -0.4 1,971,569 - +0.1 1,971,624 + +0.1 1,971,624 + +0.3 1,971,625 - -1.0 1,971,625 - +0.3 1,971,625 - -0.3 1,971,660 + -0.4 1,971,660 + -0.1 1,971,660 + -0.1 1,971,675 + +0.2 1,971,675 + -2.2 1,971,675 + +0.3 1,971,675 + +0.6 1,971,676 - +0.9 1,971,719 + +0.0 1,971,720 - -0.2 1,971,720 - -0.7 1,973,069 - +0.1 1,973,078 - -0.1 1,973,078 - -0.9 1,973,078 - -0.4
Or see this region's nucleotide sequence