Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS09490 and A4249_RS09495 are separated by 51 nucleotides A4249_RS09495 and A4249_RS09500 are separated by 8 nucleotides
A4249_RS09490: A4249_RS09490 - response regulator, at 1,895,390 to 1,896,778
_RS09490
A4249_RS09495: A4249_RS09495 - folate-binding protein YgfZ, at 1,896,830 to 1,897,633
_RS09495
A4249_RS09500: A4249_RS09500 - 3-oxoacyl-ACP reductase, at 1,897,642 to 1,898,400
_RS09500
Position (kb) 1896
1897
1898 Strain fitness (log2 ratio) -2
-1
0
1 at 1896.268 kb on + strand, within A4249_RS09490 at 1896.268 kb on + strand, within A4249_RS09490 at 1896.268 kb on + strand, within A4249_RS09490 at 1896.269 kb on - strand, within A4249_RS09490 at 1896.269 kb on - strand, within A4249_RS09490 at 1896.374 kb on + strand, within A4249_RS09490 at 1896.374 kb on + strand, within A4249_RS09490 at 1896.374 kb on + strand, within A4249_RS09490 at 1896.374 kb on + strand, within A4249_RS09490 at 1896.375 kb on - strand, within A4249_RS09490 at 1896.375 kb on - strand, within A4249_RS09490 at 1896.375 kb on - strand, within A4249_RS09490 at 1896.528 kb on + strand, within A4249_RS09490 at 1896.639 kb on - strand, within A4249_RS09490 at 1896.818 kb on + strand at 1896.818 kb on + strand at 1896.818 kb on + strand at 1896.818 kb on + strand at 1896.819 kb on - strand at 1897.076 kb on + strand, within A4249_RS09495 at 1897.233 kb on - strand, within A4249_RS09495 at 1897.915 kb on + strand, within A4249_RS09500 at 1897.915 kb on + strand, within A4249_RS09500 at 1897.916 kb on - strand, within A4249_RS09500 at 1897.916 kb on - strand, within A4249_RS09500 at 1897.916 kb on - strand, within A4249_RS09500 at 1897.916 kb on - strand, within A4249_RS09500 at 1897.916 kb on - strand, within A4249_RS09500 at 1898.104 kb on + strand, within A4249_RS09500 at 1898.105 kb on - strand, within A4249_RS09500 at 1898.105 kb on - strand, within A4249_RS09500 at 1898.113 kb on + strand, within A4249_RS09500 at 1898.113 kb on + strand, within A4249_RS09500 at 1898.113 kb on + strand, within A4249_RS09500 at 1898.113 kb on + strand, within A4249_RS09500 at 1898.114 kb on - strand, within A4249_RS09500 at 1898.114 kb on - strand, within A4249_RS09500 at 1898.114 kb on - strand, within A4249_RS09500 at 1898.114 kb on - strand, within A4249_RS09500 at 1898.114 kb on - strand, within A4249_RS09500 at 1898.580 kb on + strand at 1898.581 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 1,896,268 + A4249_RS09490 0.63 -0.4 1,896,268 + A4249_RS09490 0.63 -2.2 1,896,268 + A4249_RS09490 0.63 +0.1 1,896,269 - A4249_RS09490 0.63 -0.4 1,896,269 - A4249_RS09490 0.63 +1.1 1,896,374 + A4249_RS09490 0.71 +1.0 1,896,374 + A4249_RS09490 0.71 -1.5 1,896,374 + A4249_RS09490 0.71 -0.3 1,896,374 + A4249_RS09490 0.71 +0.6 1,896,375 - A4249_RS09490 0.71 -0.2 1,896,375 - A4249_RS09490 0.71 -1.4 1,896,375 - A4249_RS09490 0.71 +0.7 1,896,528 + A4249_RS09490 0.82 -0.4 1,896,639 - A4249_RS09490 0.90 +0.6 1,896,818 + +0.6 1,896,818 + +1.3 1,896,818 + -0.4 1,896,818 + +0.1 1,896,819 - -0.1 1,897,076 + A4249_RS09495 0.31 -0.2 1,897,233 - A4249_RS09495 0.50 +0.1 1,897,915 + A4249_RS09500 0.36 -0.2 1,897,915 + A4249_RS09500 0.36 -0.2 1,897,916 - A4249_RS09500 0.36 -0.4 1,897,916 - A4249_RS09500 0.36 -0.0 1,897,916 - A4249_RS09500 0.36 -0.6 1,897,916 - A4249_RS09500 0.36 +0.7 1,897,916 - A4249_RS09500 0.36 -0.9 1,898,104 + A4249_RS09500 0.61 +0.4 1,898,105 - A4249_RS09500 0.61 -0.1 1,898,105 - A4249_RS09500 0.61 -0.0 1,898,113 + A4249_RS09500 0.62 +0.6 1,898,113 + A4249_RS09500 0.62 +0.0 1,898,113 + A4249_RS09500 0.62 +0.9 1,898,113 + A4249_RS09500 0.62 -0.9 1,898,114 - A4249_RS09500 0.62 -1.5 1,898,114 - A4249_RS09500 0.62 -0.1 1,898,114 - A4249_RS09500 0.62 -0.1 1,898,114 - A4249_RS09500 0.62 -0.3 1,898,114 - A4249_RS09500 0.62 -0.9 1,898,580 + +0.2 1,898,581 - -0.2
Or see this region's nucleotide sequence