Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS09145

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS09140 and A4249_RS09145 are separated by 128 nucleotidesA4249_RS09145 and A4249_RS09150 are separated by 168 nucleotidesA4249_RS09150 and A4249_RS09155 are separated by 127 nucleotides A4249_RS09140: A4249_RS09140 - cysteine--tRNA ligase, at 1,829,918 to 1,831,369 _RS09140 A4249_RS09145: A4249_RS09145 - GTP cyclohydrolase I FolE, at 1,831,498 to 1,832,112 _RS09145 A4249_RS09150: A4249_RS09150 - biopolymer transporter ExbD, at 1,832,281 to 1,832,715 _RS09150 A4249_RS09155: A4249_RS09155 - gamma-glutamyltransferase family protein, at 1,832,843 to 1,834,672 _RS09155 Position (kb) 1831 1832 1833Strain fitness (log2 ratio) -1 0 1 2at 1831.417 kb on + strandat 1831.419 kb on + strandat 1831.419 kb on + strandat 1831.430 kb on + strandat 1831.430 kb on + strandat 1831.430 kb on + strandat 1831.432 kb on + strandat 1831.432 kb on + strandat 1831.432 kb on + strandat 1831.432 kb on + strandat 1831.432 kb on + strandat 1831.433 kb on - strandat 1831.433 kb on - strandat 1831.433 kb on - strandat 1831.433 kb on - strandat 1831.433 kb on - strandat 1831.433 kb on - strandat 1831.433 kb on - strandat 1831.433 kb on - strandat 1831.450 kb on + strandat 1831.450 kb on + strandat 1831.450 kb on + strandat 1831.450 kb on + strandat 1832.140 kb on + strandat 1832.140 kb on + strandat 1832.141 kb on - strandat 1832.141 kb on - strandat 1832.141 kb on - strandat 1832.141 kb on - strandat 1832.142 kb on + strandat 1832.142 kb on + strandat 1832.142 kb on + strandat 1832.142 kb on + strandat 1832.142 kb on + strandat 1832.143 kb on - strandat 1832.143 kb on - strandat 1832.143 kb on - strandat 1832.172 kb on - strandat 1832.182 kb on + strandat 1832.182 kb on + strandat 1832.713 kb on + strandat 1832.713 kb on + strandat 1832.713 kb on + strandat 1832.714 kb on - strandat 1832.714 kb on - strandat 1832.714 kb on - strandat 1832.714 kb on - strandat 1833.093 kb on + strand, within A4249_RS09155at 1833.093 kb on + strand, within A4249_RS09155at 1833.094 kb on - strand, within A4249_RS09155at 1833.094 kb on - strand, within A4249_RS09155at 1833.094 kb on - strand, within A4249_RS09155at 1833.102 kb on + strand, within A4249_RS09155at 1833.102 kb on + strand, within A4249_RS09155at 1833.103 kb on - strand, within A4249_RS09155

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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1,831,417 + -1.2
1,831,419 + +1.3
1,831,419 + -0.2
1,831,430 + -0.2
1,831,430 + -0.1
1,831,430 + +1.8
1,831,432 + -0.0
1,831,432 + +0.3
1,831,432 + +1.1
1,831,432 + -0.3
1,831,432 + -0.4
1,831,433 - +0.6
1,831,433 - +0.5
1,831,433 - -0.0
1,831,433 - +0.8
1,831,433 - -0.9
1,831,433 - +0.8
1,831,433 - -0.5
1,831,433 - -1.5
1,831,450 + +0.8
1,831,450 + -0.2
1,831,450 + -0.9
1,831,450 + +0.3
1,832,140 + +1.0
1,832,140 + +1.0
1,832,141 - -0.1
1,832,141 - -0.2
1,832,141 - +0.0
1,832,141 - -1.4
1,832,142 + +0.3
1,832,142 + +0.3
1,832,142 + -1.2
1,832,142 + -1.0
1,832,142 + +0.2
1,832,143 - -1.2
1,832,143 - +0.1
1,832,143 - -1.0
1,832,172 - -0.1
1,832,182 + -0.4
1,832,182 + -0.1
1,832,713 + -0.5
1,832,713 + +0.2
1,832,713 + -0.4
1,832,714 - -0.2
1,832,714 - +0.0
1,832,714 - +0.4
1,832,714 - +0.1
1,833,093 + A4249_RS09155 0.14 +0.9
1,833,093 + A4249_RS09155 0.14 -0.6
1,833,094 - A4249_RS09155 0.14 +0.6
1,833,094 - A4249_RS09155 0.14 -0.4
1,833,094 - A4249_RS09155 0.14 +0.8
1,833,102 + A4249_RS09155 0.14 -0.5
1,833,102 + A4249_RS09155 0.14 -0.2
1,833,103 - A4249_RS09155 0.14 +0.4

Or see this region's nucleotide sequence