Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS09130

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS16940 and A4249_RS09120 are separated by 128 nucleotidesA4249_RS09120 and A4249_RS09125 are separated by 12 nucleotidesA4249_RS09125 and A4249_RS09130 are separated by 195 nucleotidesA4249_RS09130 and A4249_RS09135 are separated by 472 nucleotides A4249_RS16940: A4249_RS16940 - GIY-YIG nuclease family protein, at 1,826,896 to 1,826,994 _RS16940 A4249_RS09120: A4249_RS09120 - hypothetical protein, at 1,827,123 to 1,827,503 _RS09120 A4249_RS09125: A4249_RS09125 - DUF2312 domain-containing protein, at 1,827,516 to 1,827,791 _RS09125 A4249_RS09130: A4249_RS09130 - type B 50S ribosomal protein L36, at 1,827,987 to 1,828,112 _RS09130 A4249_RS09135: A4249_RS09135 - lytic murein transglycosylase, at 1,828,585 to 1,829,868 _RS09135 Position (kb) 1827 1828 1829Strain fitness (log2 ratio) -2 -1 0 1at 1827.002 kb on + strandat 1827.002 kb on + strandat 1827.002 kb on + strandat 1827.002 kb on + strandat 1827.002 kb on + strandat 1827.002 kb on + strandat 1827.002 kb on + strandat 1827.002 kb on + strandat 1827.002 kb on + strandat 1827.003 kb on - strandat 1827.003 kb on - strandat 1827.003 kb on - strandat 1827.003 kb on - strandat 1827.003 kb on - strandat 1827.003 kb on - strandat 1827.034 kb on - strandat 1827.035 kb on + strandat 1827.035 kb on + strandat 1827.035 kb on + strandat 1827.035 kb on + strandat 1827.035 kb on + strandat 1827.035 kb on + strandat 1827.035 kb on + strandat 1827.035 kb on + strandat 1827.035 kb on + strandat 1827.035 kb on + strandat 1827.035 kb on + strandat 1827.035 kb on + strandat 1827.035 kb on + strandat 1827.035 kb on + strandat 1827.035 kb on + strandat 1827.035 kb on + strandat 1827.035 kb on + strandat 1827.036 kb on - strandat 1827.036 kb on - strandat 1827.036 kb on - strandat 1827.036 kb on - strandat 1827.036 kb on - strandat 1827.036 kb on - strandat 1827.036 kb on - strandat 1827.036 kb on - strandat 1827.036 kb on - strandat 1827.036 kb on - strandat 1827.036 kb on - strandat 1827.036 kb on - strandat 1827.036 kb on - strandat 1827.036 kb on - strandat 1827.066 kb on + strandat 1827.066 kb on + strandat 1827.066 kb on + strandat 1827.067 kb on - strandat 1827.165 kb on + strand, within A4249_RS09120at 1827.165 kb on + strand, within A4249_RS09120at 1827.166 kb on - strand, within A4249_RS09120at 1827.166 kb on - strand, within A4249_RS09120at 1827.166 kb on - strand, within A4249_RS09120at 1827.166 kb on - strand, within A4249_RS09120at 1827.517 kb on + strandat 1827.517 kb on + strandat 1827.517 kb on + strandat 1827.517 kb on + strandat 1827.518 kb on - strandat 1827.518 kb on - strandat 1827.518 kb on - strandat 1827.518 kb on - strandat 1827.518 kb on - strandat 1827.518 kb on - strandat 1827.518 kb on - strandat 1827.518 kb on - strandat 1827.518 kb on - strandat 1827.518 kb on - strandat 1827.824 kb on - strandat 1827.989 kb on - strandat 1828.263 kb on + strandat 1828.263 kb on + strandat 1828.264 kb on - strandat 1828.264 kb on - strandat 1828.265 kb on + strandat 1828.265 kb on + strandat 1828.265 kb on + strandat 1828.265 kb on + strandat 1828.265 kb on + strandat 1828.265 kb on + strandat 1828.266 kb on - strandat 1828.266 kb on - strandat 1828.266 kb on - strandat 1828.266 kb on - strandat 1828.266 kb on - strandat 1828.266 kb on - strandat 1828.266 kb on - strandat 1828.306 kb on + strandat 1828.306 kb on + strandat 1828.306 kb on + strandat 1828.306 kb on + strandat 1828.306 kb on + strandat 1828.307 kb on - strandat 1828.307 kb on - strandat 1828.307 kb on - strandat 1828.307 kb on - strandat 1828.307 kb on - strandat 1828.307 kb on - strandat 1828.307 kb on - strandat 1828.307 kb on - strandat 1828.307 kb on - strandat 1828.307 kb on - strandat 1828.307 kb on - strandat 1828.307 kb on - strandat 1828.307 kb on - strandat 1828.307 kb on - strandat 1828.307 kb on - strandat 1828.307 kb on - strandat 1828.307 kb on - strandat 1828.308 kb on + strandat 1828.310 kb on + strandat 1828.310 kb on + strandat 1828.310 kb on + strandat 1828.310 kb on + strandat 1828.311 kb on - strandat 1828.311 kb on - strandat 1828.311 kb on - strandat 1828.311 kb on - strandat 1828.311 kb on - strandat 1828.311 kb on - strandat 1828.349 kb on + strandat 1828.425 kb on + strandat 1828.425 kb on + strandat 1828.425 kb on + strandat 1828.425 kb on + strandat 1828.425 kb on + strandat 1828.426 kb on - strandat 1828.426 kb on - strandat 1828.426 kb on - strandat 1828.426 kb on - strandat 1828.427 kb on + strandat 1828.428 kb on - strandat 1828.428 kb on - strandat 1828.439 kb on + strandat 1828.439 kb on + strandat 1828.464 kb on + strandat 1828.464 kb on + strandat 1828.465 kb on - strandat 1828.514 kb on + strandat 1828.572 kb on + strandat 1828.572 kb on + strandat 1828.572 kb on + strandat 1828.573 kb on - strandat 1828.573 kb on - strandat 1828.573 kb on - strandat 1828.747 kb on + strand, within A4249_RS09135at 1828.819 kb on + strand, within A4249_RS09135at 1828.819 kb on + strand, within A4249_RS09135at 1828.820 kb on - strand, within A4249_RS09135at 1828.820 kb on - strand, within A4249_RS09135at 1828.909 kb on + strand, within A4249_RS09135at 1828.909 kb on + strand, within A4249_RS09135at 1828.909 kb on + strand, within A4249_RS09135at 1828.909 kb on + strand, within A4249_RS09135at 1828.909 kb on + strand, within A4249_RS09135at 1828.909 kb on + strand, within A4249_RS09135at 1828.910 kb on - strand, within A4249_RS09135at 1828.910 kb on - strand, within A4249_RS09135at 1828.910 kb on - strand, within A4249_RS09135at 1828.910 kb on - strand, within A4249_RS09135at 1828.910 kb on - strand, within A4249_RS09135at 1828.910 kb on - strand, within A4249_RS09135at 1828.910 kb on - strand, within A4249_RS09135at 1829.065 kb on + strand, within A4249_RS09135at 1829.065 kb on + strand, within A4249_RS09135at 1829.066 kb on - strand, within A4249_RS09135at 1829.066 kb on - strand, within A4249_RS09135at 1829.066 kb on - strand, within A4249_RS09135at 1829.066 kb on - strand, within A4249_RS09135at 1829.066 kb on - strand, within A4249_RS09135at 1829.066 kb on - strand, within A4249_RS09135at 1829.066 kb on - strand, within A4249_RS09135at 1829.098 kb on + strand, within A4249_RS09135at 1829.098 kb on + strand, within A4249_RS09135at 1829.098 kb on + strand, within A4249_RS09135at 1829.098 kb on + strand, within A4249_RS09135at 1829.098 kb on + strand, within A4249_RS09135at 1829.098 kb on + strand, within A4249_RS09135at 1829.098 kb on + strand, within A4249_RS09135at 1829.098 kb on + strand, within A4249_RS09135at 1829.099 kb on - strand, within A4249_RS09135at 1829.099 kb on - strand, within A4249_RS09135at 1829.099 kb on - strand, within A4249_RS09135at 1829.099 kb on - strand, within A4249_RS09135at 1829.099 kb on - strand, within A4249_RS09135at 1829.099 kb on - strand, within A4249_RS09135at 1829.099 kb on - strand, within A4249_RS09135at 1829.099 kb on - strand, within A4249_RS09135at 1829.099 kb on - strand, within A4249_RS09135

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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1,827,002 + +0.6
1,827,002 + +0.5
1,827,002 + -0.4
1,827,002 + +0.1
1,827,002 + +0.1
1,827,002 + +0.2
1,827,002 + -0.4
1,827,002 + -0.9
1,827,002 + +0.2
1,827,003 - -0.4
1,827,003 - +0.4
1,827,003 - -0.0
1,827,003 - -0.1
1,827,003 - -0.2
1,827,003 - -0.4
1,827,034 - -0.4
1,827,035 + +0.1
1,827,035 + -0.1
1,827,035 + +0.4
1,827,035 + -0.1
1,827,035 + +0.4
1,827,035 + -0.8
1,827,035 + -0.1
1,827,035 + +0.3
1,827,035 + -0.2
1,827,035 + +0.7
1,827,035 + -0.1
1,827,035 + +0.5
1,827,035 + -0.2
1,827,035 + -0.5
1,827,035 + -1.1
1,827,035 + -0.7
1,827,035 + +0.3
1,827,036 - +1.1
1,827,036 - -0.3
1,827,036 - -1.2
1,827,036 - +0.3
1,827,036 - +0.2
1,827,036 - +0.7
1,827,036 - +0.5
1,827,036 - -0.2
1,827,036 - +0.0
1,827,036 - +0.2
1,827,036 - +0.7
1,827,036 - -0.4
1,827,036 - +0.0
1,827,036 - +0.2
1,827,066 + +1.4
1,827,066 + -0.4
1,827,066 + -0.4
1,827,067 - -0.4
1,827,165 + A4249_RS09120 0.11 +0.1
1,827,165 + A4249_RS09120 0.11 -0.1
1,827,166 - A4249_RS09120 0.11 +0.3
1,827,166 - A4249_RS09120 0.11 +0.8
1,827,166 - A4249_RS09120 0.11 +0.1
1,827,166 - A4249_RS09120 0.11 +1.1
1,827,517 + +0.1
1,827,517 + -0.5
1,827,517 + -1.3
1,827,517 + -0.2
1,827,518 - +0.3
1,827,518 - -0.2
1,827,518 - +0.5
1,827,518 - -0.6
1,827,518 - +0.7
1,827,518 - +1.0
1,827,518 - +0.3
1,827,518 - -0.0
1,827,518 - +0.6
1,827,518 - +0.1
1,827,824 - -1.6
1,827,989 - -0.9
1,828,263 + -1.8
1,828,263 + -1.3
1,828,264 - -0.4
1,828,264 - +0.9
1,828,265 + +0.4
1,828,265 + -0.0
1,828,265 + -0.5
1,828,265 + +1.3
1,828,265 + -0.4
1,828,265 + +0.0
1,828,266 - -0.3
1,828,266 - -0.1
1,828,266 - +0.4
1,828,266 - -0.6
1,828,266 - +0.8
1,828,266 - +1.0
1,828,266 - -0.3
1,828,306 + +1.2
1,828,306 + +0.0
1,828,306 + +0.1
1,828,306 + +1.3
1,828,306 + +1.0
1,828,307 - -0.1
1,828,307 - -0.9
1,828,307 - +0.7
1,828,307 - +0.2
1,828,307 - -0.1
1,828,307 - -0.1
1,828,307 - +0.1
1,828,307 - -0.3
1,828,307 - -0.2
1,828,307 - +0.8
1,828,307 - +0.0
1,828,307 - +0.8
1,828,307 - -0.2
1,828,307 - -1.4
1,828,307 - -0.5
1,828,307 - -1.2
1,828,307 - -1.6
1,828,308 + -0.3
1,828,310 + +0.3
1,828,310 + -0.1
1,828,310 + +0.1
1,828,310 + -1.4
1,828,311 - +0.8
1,828,311 - +0.2
1,828,311 - -0.2
1,828,311 - -0.1
1,828,311 - +0.1
1,828,311 - +0.1
1,828,349 + +1.4
1,828,425 + -0.8
1,828,425 + -0.2
1,828,425 + -0.6
1,828,425 + +0.5
1,828,425 + -0.4
1,828,426 - -1.2
1,828,426 - +0.1
1,828,426 - +0.0
1,828,426 - -0.1
1,828,427 + +1.0
1,828,428 - -0.3
1,828,428 - +0.0
1,828,439 + +0.1
1,828,439 + -0.3
1,828,464 + +0.3
1,828,464 + +0.3
1,828,465 - +0.1
1,828,514 + -0.4
1,828,572 + -0.6
1,828,572 + +0.4
1,828,572 + -0.4
1,828,573 - +0.1
1,828,573 - -0.2
1,828,573 - -0.1
1,828,747 + A4249_RS09135 0.13 +0.3
1,828,819 + A4249_RS09135 0.18 -0.3
1,828,819 + A4249_RS09135 0.18 -0.1
1,828,820 - A4249_RS09135 0.18 -0.1
1,828,820 - A4249_RS09135 0.18 -0.5
1,828,909 + A4249_RS09135 0.25 -0.4
1,828,909 + A4249_RS09135 0.25 -0.3
1,828,909 + A4249_RS09135 0.25 -0.4
1,828,909 + A4249_RS09135 0.25 -0.1
1,828,909 + A4249_RS09135 0.25 +0.4
1,828,909 + A4249_RS09135 0.25 +0.6
1,828,910 - A4249_RS09135 0.25 -0.0
1,828,910 - A4249_RS09135 0.25 -0.2
1,828,910 - A4249_RS09135 0.25 -0.3
1,828,910 - A4249_RS09135 0.25 +0.1
1,828,910 - A4249_RS09135 0.25 -0.0
1,828,910 - A4249_RS09135 0.25 -0.8
1,828,910 - A4249_RS09135 0.25 +0.1
1,829,065 + A4249_RS09135 0.37 -0.2
1,829,065 + A4249_RS09135 0.37 -0.1
1,829,066 - A4249_RS09135 0.37 -0.0
1,829,066 - A4249_RS09135 0.37 +0.1
1,829,066 - A4249_RS09135 0.37 -0.5
1,829,066 - A4249_RS09135 0.37 -0.0
1,829,066 - A4249_RS09135 0.37 -0.5
1,829,066 - A4249_RS09135 0.37 +0.1
1,829,066 - A4249_RS09135 0.37 +0.0
1,829,098 + A4249_RS09135 0.40 -0.9
1,829,098 + A4249_RS09135 0.40 -0.5
1,829,098 + A4249_RS09135 0.40 +0.3
1,829,098 + A4249_RS09135 0.40 -0.2
1,829,098 + A4249_RS09135 0.40 -0.2
1,829,098 + A4249_RS09135 0.40 -0.0
1,829,098 + A4249_RS09135 0.40 +0.1
1,829,098 + A4249_RS09135 0.40 -0.1
1,829,099 - A4249_RS09135 0.40 +0.0
1,829,099 - A4249_RS09135 0.40 -0.3
1,829,099 - A4249_RS09135 0.40 +0.0
1,829,099 - A4249_RS09135 0.40 +0.0
1,829,099 - A4249_RS09135 0.40 -0.2
1,829,099 - A4249_RS09135 0.40 -0.1
1,829,099 - A4249_RS09135 0.40 -0.3
1,829,099 - A4249_RS09135 0.40 -0.4
1,829,099 - A4249_RS09135 0.40 +0.1

Or see this region's nucleotide sequence