Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS08240 and A4249_RS08245 overlap by 4 nucleotides A4249_RS08245 and A4249_RS08250 are separated by 50 nucleotides A4249_RS08250 and A4249_RS08255 are separated by 65 nucleotides A4249_RS08255 and A4249_RS08260 are separated by 20 nucleotides A4249_RS08260 and A4249_RS08265 are separated by 45 nucleotides
A4249_RS08240: A4249_RS08240 - ABC-F family ATP-binding cassette domain-containing protein, at 1,657,802 to 1,659,691
_RS08240
A4249_RS08245: A4249_RS08245 - DUF2164 domain-containing protein, at 1,659,688 to 1,659,939
_RS08245
A4249_RS08250: A4249_RS08250 - DUF3126 family protein, at 1,659,990 to 1,660,199
_RS08250
A4249_RS08255: A4249_RS08255 - serine O-acetyltransferase, at 1,660,265 to 1,661,092
_RS08255
A4249_RS08260: A4249_RS08260 - NUDIX hydrolase, at 1,661,113 to 1,661,739
_RS08260
A4249_RS08265: A4249_RS08265 - nitroreductase, at 1,661,785 to 1,662,378
_RS08265
Position (kb)
1660
1661
1662 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1659.339 kb on - strand, within A4249_RS08240 at 1659.339 kb on - strand, within A4249_RS08240 at 1659.748 kb on + strand, within A4249_RS08245 at 1659.748 kb on + strand, within A4249_RS08245 at 1659.749 kb on - strand, within A4249_RS08245 at 1659.749 kb on - strand, within A4249_RS08245 at 1659.749 kb on - strand, within A4249_RS08245 at 1659.749 kb on - strand, within A4249_RS08245 at 1659.838 kb on + strand, within A4249_RS08245 at 1659.838 kb on + strand, within A4249_RS08245 at 1659.838 kb on + strand, within A4249_RS08245 at 1659.838 kb on + strand, within A4249_RS08245 at 1659.838 kb on + strand, within A4249_RS08245 at 1659.839 kb on - strand, within A4249_RS08245 at 1659.839 kb on - strand, within A4249_RS08245 at 1659.839 kb on - strand, within A4249_RS08245 at 1659.839 kb on - strand, within A4249_RS08245 at 1659.839 kb on - strand, within A4249_RS08245 at 1660.090 kb on + strand, within A4249_RS08250 at 1660.090 kb on + strand, within A4249_RS08250 at 1660.090 kb on + strand, within A4249_RS08250 at 1660.090 kb on + strand, within A4249_RS08250 at 1660.090 kb on + strand, within A4249_RS08250 at 1660.090 kb on + strand, within A4249_RS08250 at 1660.090 kb on + strand, within A4249_RS08250 at 1660.090 kb on + strand, within A4249_RS08250 at 1660.090 kb on + strand, within A4249_RS08250 at 1660.090 kb on + strand, within A4249_RS08250 at 1660.091 kb on - strand, within A4249_RS08250 at 1660.091 kb on - strand, within A4249_RS08250 at 1660.091 kb on - strand, within A4249_RS08250 at 1660.091 kb on - strand, within A4249_RS08250 at 1660.091 kb on - strand, within A4249_RS08250 at 1660.091 kb on - strand, within A4249_RS08250 at 1660.091 kb on - strand, within A4249_RS08250 at 1660.281 kb on + strand at 1660.281 kb on + strand at 1660.282 kb on - strand at 1660.282 kb on - strand at 1660.426 kb on - strand, within A4249_RS08255 at 1660.426 kb on - strand, within A4249_RS08255 at 1660.440 kb on - strand, within A4249_RS08255 at 1660.441 kb on + strand, within A4249_RS08255 at 1660.441 kb on + strand, within A4249_RS08255 at 1660.441 kb on + strand, within A4249_RS08255 at 1660.442 kb on - strand, within A4249_RS08255 at 1660.764 kb on + strand, within A4249_RS08255 at 1661.116 kb on + strand at 1661.116 kb on + strand at 1661.116 kb on + strand at 1661.116 kb on + strand at 1661.116 kb on + strand at 1661.117 kb on - strand at 1661.117 kb on - strand at 1661.117 kb on - strand at 1661.117 kb on - strand at 1661.172 kb on + strand at 1661.172 kb on + strand at 1661.172 kb on + strand at 1661.172 kb on + strand at 1661.172 kb on + strand at 1661.173 kb on - strand at 1661.173 kb on - strand at 1661.173 kb on - strand at 1661.177 kb on + strand, within A4249_RS08260 at 1661.177 kb on + strand, within A4249_RS08260 at 1661.177 kb on + strand, within A4249_RS08260 at 1661.177 kb on + strand, within A4249_RS08260 at 1661.177 kb on + strand, within A4249_RS08260 at 1661.177 kb on + strand, within A4249_RS08260 at 1661.177 kb on + strand, within A4249_RS08260 at 1661.178 kb on - strand, within A4249_RS08260 at 1661.178 kb on - strand, within A4249_RS08260 at 1661.178 kb on - strand, within A4249_RS08260 at 1661.178 kb on - strand, within A4249_RS08260 at 1661.178 kb on - strand, within A4249_RS08260 at 1661.178 kb on - strand, within A4249_RS08260 at 1661.186 kb on + strand, within A4249_RS08260 at 1661.186 kb on + strand, within A4249_RS08260 at 1661.186 kb on + strand, within A4249_RS08260 at 1661.186 kb on + strand, within A4249_RS08260 at 1661.186 kb on + strand, within A4249_RS08260 at 1661.186 kb on + strand, within A4249_RS08260 at 1661.187 kb on - strand, within A4249_RS08260 at 1661.187 kb on - strand, within A4249_RS08260 at 1661.187 kb on - strand, within A4249_RS08260 at 1661.187 kb on - strand, within A4249_RS08260 at 1661.187 kb on - strand, within A4249_RS08260 at 1661.187 kb on - strand, within A4249_RS08260 at 1661.187 kb on - strand, within A4249_RS08260 at 1661.489 kb on + strand, within A4249_RS08260 at 1661.489 kb on + strand, within A4249_RS08260 at 1661.489 kb on + strand, within A4249_RS08260 at 1661.489 kb on + strand, within A4249_RS08260 at 1661.489 kb on + strand, within A4249_RS08260 at 1661.489 kb on + strand, within A4249_RS08260 at 1661.489 kb on + strand, within A4249_RS08260 at 1661.489 kb on + strand, within A4249_RS08260 at 1661.489 kb on + strand, within A4249_RS08260 at 1661.489 kb on + strand, within A4249_RS08260 at 1661.490 kb on - strand, within A4249_RS08260 at 1661.490 kb on - strand, within A4249_RS08260 at 1661.490 kb on - strand, within A4249_RS08260 at 1661.490 kb on - strand, within A4249_RS08260 at 1661.490 kb on - strand, within A4249_RS08260 at 1661.592 kb on - strand, within A4249_RS08260 at 1661.592 kb on - strand, within A4249_RS08260 at 1661.592 kb on - strand, within A4249_RS08260 at 1661.592 kb on - strand, within A4249_RS08260 at 1661.592 kb on - strand, within A4249_RS08260 at 1661.749 kb on - strand at 1661.749 kb on - strand at 1661.749 kb on - strand at 1661.773 kb on + strand at 1661.773 kb on + strand at 1661.773 kb on + strand at 1661.773 kb on + strand at 1661.774 kb on - strand at 1661.774 kb on - strand at 1661.774 kb on - strand at 1661.774 kb on - strand at 1661.774 kb on - strand at 1661.777 kb on + strand at 1661.777 kb on + strand at 1661.778 kb on - strand at 1661.778 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 1,659,339 - A4249_RS08240 0.81 +0.5 1,659,339 - A4249_RS08240 0.81 -0.4 1,659,748 + A4249_RS08245 0.24 -0.4 1,659,748 + A4249_RS08245 0.24 -0.3 1,659,749 - A4249_RS08245 0.24 +0.1 1,659,749 - A4249_RS08245 0.24 +0.1 1,659,749 - A4249_RS08245 0.24 +0.8 1,659,749 - A4249_RS08245 0.24 -0.7 1,659,838 + A4249_RS08245 0.60 -0.2 1,659,838 + A4249_RS08245 0.60 +1.6 1,659,838 + A4249_RS08245 0.60 -0.3 1,659,838 + A4249_RS08245 0.60 +0.4 1,659,838 + A4249_RS08245 0.60 +0.3 1,659,839 - A4249_RS08245 0.60 +0.1 1,659,839 - A4249_RS08245 0.60 -1.0 1,659,839 - A4249_RS08245 0.60 -0.3 1,659,839 - A4249_RS08245 0.60 +0.7 1,659,839 - A4249_RS08245 0.60 +0.7 1,660,090 + A4249_RS08250 0.48 -0.5 1,660,090 + A4249_RS08250 0.48 -0.2 1,660,090 + A4249_RS08250 0.48 -0.3 1,660,090 + A4249_RS08250 0.48 -0.5 1,660,090 + A4249_RS08250 0.48 -0.4 1,660,090 + A4249_RS08250 0.48 -0.2 1,660,090 + A4249_RS08250 0.48 -0.4 1,660,090 + A4249_RS08250 0.48 -0.1 1,660,090 + A4249_RS08250 0.48 -0.4 1,660,090 + A4249_RS08250 0.48 -0.1 1,660,091 - A4249_RS08250 0.48 -0.1 1,660,091 - A4249_RS08250 0.48 -0.3 1,660,091 - A4249_RS08250 0.48 -0.6 1,660,091 - A4249_RS08250 0.48 -0.2 1,660,091 - A4249_RS08250 0.48 +0.1 1,660,091 - A4249_RS08250 0.48 -0.2 1,660,091 - A4249_RS08250 0.48 -0.0 1,660,281 + -0.3 1,660,281 + -1.0 1,660,282 - +0.2 1,660,282 - -0.3 1,660,426 - A4249_RS08255 0.19 -1.4 1,660,426 - A4249_RS08255 0.19 -0.3 1,660,440 - A4249_RS08255 0.21 -2.1 1,660,441 + A4249_RS08255 0.21 +0.6 1,660,441 + A4249_RS08255 0.21 -1.6 1,660,441 + A4249_RS08255 0.21 +0.0 1,660,442 - A4249_RS08255 0.21 -0.8 1,660,764 + A4249_RS08255 0.60 -0.0 1,661,116 + +0.6 1,661,116 + +0.6 1,661,116 + -0.3 1,661,116 + +0.0 1,661,116 + -1.2 1,661,117 - +0.5 1,661,117 - +0.8 1,661,117 - +1.0 1,661,117 - -0.4 1,661,172 + -0.5 1,661,172 + -1.8 1,661,172 + -3.1 1,661,172 + -0.4 1,661,172 + -0.2 1,661,173 - +0.0 1,661,173 - +0.9 1,661,173 - -1.1 1,661,177 + A4249_RS08260 0.10 +0.4 1,661,177 + A4249_RS08260 0.10 +0.2 1,661,177 + A4249_RS08260 0.10 -0.7 1,661,177 + A4249_RS08260 0.10 -0.9 1,661,177 + A4249_RS08260 0.10 -0.1 1,661,177 + A4249_RS08260 0.10 -0.5 1,661,177 + A4249_RS08260 0.10 +1.2 1,661,178 - A4249_RS08260 0.10 +0.7 1,661,178 - A4249_RS08260 0.10 -0.2 1,661,178 - A4249_RS08260 0.10 -0.1 1,661,178 - A4249_RS08260 0.10 -0.4 1,661,178 - A4249_RS08260 0.10 +0.9 1,661,178 - A4249_RS08260 0.10 +1.6 1,661,186 + A4249_RS08260 0.12 +0.6 1,661,186 + A4249_RS08260 0.12 +0.3 1,661,186 + A4249_RS08260 0.12 -1.2 1,661,186 + A4249_RS08260 0.12 -0.9 1,661,186 + A4249_RS08260 0.12 +0.1 1,661,186 + A4249_RS08260 0.12 +0.2 1,661,187 - A4249_RS08260 0.12 +0.5 1,661,187 - A4249_RS08260 0.12 -1.3 1,661,187 - A4249_RS08260 0.12 -0.3 1,661,187 - A4249_RS08260 0.12 +0.5 1,661,187 - A4249_RS08260 0.12 -1.0 1,661,187 - A4249_RS08260 0.12 -0.6 1,661,187 - A4249_RS08260 0.12 +0.2 1,661,489 + A4249_RS08260 0.60 -0.3 1,661,489 + A4249_RS08260 0.60 -0.7 1,661,489 + A4249_RS08260 0.60 -0.6 1,661,489 + A4249_RS08260 0.60 +0.1 1,661,489 + A4249_RS08260 0.60 +0.5 1,661,489 + A4249_RS08260 0.60 -0.3 1,661,489 + A4249_RS08260 0.60 -0.1 1,661,489 + A4249_RS08260 0.60 +0.1 1,661,489 + A4249_RS08260 0.60 -0.4 1,661,489 + A4249_RS08260 0.60 -0.0 1,661,490 - A4249_RS08260 0.60 -0.2 1,661,490 - A4249_RS08260 0.60 -0.3 1,661,490 - A4249_RS08260 0.60 +0.3 1,661,490 - A4249_RS08260 0.60 -0.0 1,661,490 - A4249_RS08260 0.60 +0.1 1,661,592 - A4249_RS08260 0.76 +0.1 1,661,592 - A4249_RS08260 0.76 +0.4 1,661,592 - A4249_RS08260 0.76 +1.0 1,661,592 - A4249_RS08260 0.76 +0.3 1,661,592 - A4249_RS08260 0.76 +0.8 1,661,749 - -0.1 1,661,749 - -0.7 1,661,749 - +0.1 1,661,773 + -0.2 1,661,773 + +0.5 1,661,773 + -0.6 1,661,773 + -0.2 1,661,774 - -0.4 1,661,774 - +0.4 1,661,774 - -1.2 1,661,774 - -0.1 1,661,774 - -0.2 1,661,777 + +0.6 1,661,777 + -0.1 1,661,778 - +0.6 1,661,778 - +1.4
Or see this region's nucleotide sequence