Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS08190

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS08180 and A4249_RS08185 are separated by 129 nucleotidesA4249_RS08185 and A4249_RS08190 are separated by 86 nucleotidesA4249_RS08190 and A4249_RS08195 are separated by 60 nucleotides A4249_RS08180: A4249_RS08180 - aspartate--tRNA ligase, at 1,642,881 to 1,644,713 _RS08180 A4249_RS08185: A4249_RS08185 - YciI family protein, at 1,644,843 to 1,645,166 _RS08185 A4249_RS08190: A4249_RS08190 - DnaA/Hda family protein, at 1,645,253 to 1,645,933 _RS08190 A4249_RS08195: A4249_RS08195 - RNA degradosome polyphosphate kinase, at 1,645,994 to 1,648,210 _RS08195 Position (kb) 1645 1646Strain fitness (log2 ratio) -1 0 1at 1644.847 kb on + strandat 1644.847 kb on + strandat 1644.847 kb on + strandat 1644.847 kb on + strandat 1644.847 kb on + strandat 1644.847 kb on + strandat 1644.847 kb on + strandat 1644.847 kb on + strandat 1644.847 kb on + strandat 1644.848 kb on - strandat 1644.848 kb on - strandat 1644.848 kb on - strandat 1644.848 kb on - strandat 1644.848 kb on - strandat 1644.848 kb on - strandat 1644.848 kb on - strandat 1644.900 kb on + strand, within A4249_RS08185at 1644.900 kb on + strand, within A4249_RS08185at 1644.900 kb on + strand, within A4249_RS08185at 1644.900 kb on + strand, within A4249_RS08185at 1644.901 kb on - strand, within A4249_RS08185at 1644.901 kb on - strand, within A4249_RS08185at 1644.901 kb on - strand, within A4249_RS08185at 1644.901 kb on - strand, within A4249_RS08185at 1644.901 kb on - strand, within A4249_RS08185at 1644.901 kb on - strand, within A4249_RS08185at 1644.901 kb on - strand, within A4249_RS08185at 1644.901 kb on - strand, within A4249_RS08185at 1645.107 kb on + strand, within A4249_RS08185at 1645.107 kb on + strand, within A4249_RS08185at 1645.107 kb on + strand, within A4249_RS08185at 1645.107 kb on + strand, within A4249_RS08185at 1645.241 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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1,644,847 + -0.7
1,644,847 + +0.3
1,644,847 + -0.4
1,644,847 + +0.3
1,644,847 + +0.6
1,644,847 + +0.3
1,644,847 + +0.0
1,644,847 + -1.3
1,644,847 + +0.2
1,644,848 - +0.2
1,644,848 - +0.2
1,644,848 - +0.1
1,644,848 - +1.0
1,644,848 - +0.0
1,644,848 - +0.2
1,644,848 - -0.6
1,644,900 + A4249_RS08185 0.18 +0.7
1,644,900 + A4249_RS08185 0.18 -0.3
1,644,900 + A4249_RS08185 0.18 +1.0
1,644,900 + A4249_RS08185 0.18 +1.7
1,644,901 - A4249_RS08185 0.18 -0.6
1,644,901 - A4249_RS08185 0.18 -0.3
1,644,901 - A4249_RS08185 0.18 +0.7
1,644,901 - A4249_RS08185 0.18 +0.0
1,644,901 - A4249_RS08185 0.18 -0.4
1,644,901 - A4249_RS08185 0.18 +0.4
1,644,901 - A4249_RS08185 0.18 +0.2
1,644,901 - A4249_RS08185 0.18 +0.0
1,645,107 + A4249_RS08185 0.81 +0.8
1,645,107 + A4249_RS08185 0.81 +1.0
1,645,107 + A4249_RS08185 0.81 +0.1
1,645,107 + A4249_RS08185 0.81 -1.0
1,645,241 + +0.5

Or see this region's nucleotide sequence